The gene/protein map for NC_009720 is currently unavailable.
Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

Click here to switch to the map view.

The map label for this gene is ccmA [H]

Identifier: 154247776

GI number: 154247776

Start: 4271714

End: 4272337

Strand: Direct

Name: ccmA [H]

Synonym: Xaut_3853

Alternate gene names: 154247776

Gene position: 4271714-4272337 (Clockwise)

Preceding gene: 154247772

Following gene: 154247777

Centisome position: 80.46

GC content: 71.47

Gene sequence:

>624_bases
ATGGCGGTGTCGGCTCTGGTGGGTGAAAAGCTGGCCTGCCGCAGGGGGTTCAAGCTGCTGTTTGAGCATCTGGACGTGAC
CGCGAGGTCCGGCCGGGCGCTGCTGGTGGTCGGGCCGAACGGCGCCGGCAAGTCCTCGCTGCTGCGCATCCTCTCCGGCC
TGCTCGGGGCGACCGAAGGGAAGGTGCGCCTCGATGGGCCTGGCCTTGAGGCCGCTGACACCGGTGTGGGCGAGCACATC
CATTATCTCGGCCACGAGGATGCGGTGAAGGGCGCGCTCACGGTGCGGGCCAATCTCGCCTTCTGGCGCACCGTGCTCGG
GCCCACCGGCCTGCCGGTGGAGGACGCGCTGGAGGAGGTGGGCCTTGGCGGTCTCGGCGGGCTTCGGGCGCAGGTGCTCT
CCGCCGGGCAGAAGCGCCGGCTCGCCATCGCCCGGCTTCTGGTGTCGCGCCGTCCGGTATGGGTGCTGGACGAGCCCACC
ACGGCGCTCGACGTGAAGGCGCAGGCGCGCTTTGCCGCCTTCGGCCGGGGCCATCTGGCGGAAGGCGGCATCCTGATCGC
CGCCACCCATGCCCCGCTCGACCTGGGCGATGTGGACGAACTCAGGCTGGGGGGCGTGGGGTGA

Upstream 100 bases:

>100_bases
GGACGGCGCGGTTCGGGGGCTTTATAGAGCCATTTCAAAGCGCGGTCATGCGATAACAGCATTCAATGTGCAATGCACCA
TAAGCAGGGGGCGCGGAGCA

Downstream 100 bases:

>100_bases
TGGGCGGCATGGATCTGGGCCGGCGCGGTGGGATTGGTGGGGGAGGTGTTAGCGCCGGCGCCATCTCGCCCCCGCTCCCG
CTTGCGGGGGAGGGCTGGGG

Product: heme exporter protein CcmA

Products: NA

Alternate protein names: Heme exporter protein A [H]

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MAVSALVGEKLACRRGFKLLFEHLDVTARSGRALLVVGPNGAGKSSLLRILSGLLGATEGKVRLDGPGLEAADTGVGEHI
HYLGHEDAVKGALTVRANLAFWRTVLGPTGLPVEDALEEVGLGGLGGLRAQVLSAGQKRRLAIARLLVSRRPVWVLDEPT
TALDVKAQARFAAFGRGHLAEGGILIAATHAPLDLGDVDELRLGGVG

Sequences:

>Translated_207_residues
MAVSALVGEKLACRRGFKLLFEHLDVTARSGRALLVVGPNGAGKSSLLRILSGLLGATEGKVRLDGPGLEAADTGVGEHI
HYLGHEDAVKGALTVRANLAFWRTVLGPTGLPVEDALEEVGLGGLGGLRAQVLSAGQKRRLAIARLLVSRRPVWVLDEPT
TALDVKAQARFAAFGRGHLAEGGILIAATHAPLDLGDVDELRLGGVG
>Mature_206_residues
AVSALVGEKLACRRGFKLLFEHLDVTARSGRALLVVGPNGAGKSSLLRILSGLLGATEGKVRLDGPGLEAADTGVGEHIH
YLGHEDAVKGALTVRANLAFWRTVLGPTGLPVEDALEEVGLGGLGGLRAQVLSAGQKRRLAIARLLVSRRPVWVLDEPTT
ALDVKAQARFAAFGRGHLAEGGILIAATHAPLDLGDVDELRLGGVG

Specific function: Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system [H]

COG id: COG4133

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, ATPase component

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI46592971, Length=188, Percent_Identity=31.9148936170213, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI46592898, Length=188, Percent_Identity=31.9148936170213, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI46592978, Length=188, Percent_Identity=31.9148936170213, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI46592964, Length=188, Percent_Identity=31.9148936170213, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI46592915, Length=188, Percent_Identity=31.9148936170213, Blast_Score=74, Evalue=7e-14,
Organism=Homo sapiens, GI46592956, Length=188, Percent_Identity=31.9148936170213, Blast_Score=74, Evalue=7e-14,
Organism=Homo sapiens, GI27436953, Length=169, Percent_Identity=30.7692307692308, Blast_Score=73, Evalue=1e-13,
Organism=Homo sapiens, GI9955968, Length=183, Percent_Identity=28.9617486338798, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI9955966, Length=183, Percent_Identity=28.9617486338798, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI45243524, Length=183, Percent_Identity=28.9617486338798, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI105990541, Length=147, Percent_Identity=31.9727891156463, Blast_Score=71, Evalue=7e-13,
Organism=Homo sapiens, GI21536376, Length=182, Percent_Identity=30.2197802197802, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI42741659, Length=167, Percent_Identity=31.1377245508982, Blast_Score=69, Evalue=2e-12,
Organism=Homo sapiens, GI27881501, Length=155, Percent_Identity=28.3870967741935, Blast_Score=68, Evalue=5e-12,
Organism=Homo sapiens, GI30795238, Length=155, Percent_Identity=28.3870967741935, Blast_Score=68, Evalue=5e-12,
Organism=Homo sapiens, GI215820660, Length=187, Percent_Identity=31.0160427807487, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI20143975, Length=187, Percent_Identity=31.0160427807487, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI156105685, Length=169, Percent_Identity=31.9526627218935, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI9961250, Length=180, Percent_Identity=27.7777777777778, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI4505771, Length=191, Percent_Identity=27.2251308900524, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI73747915, Length=155, Percent_Identity=33.5483870967742, Blast_Score=65, Evalue=3e-11,
Organism=Homo sapiens, GI9961252, Length=180, Percent_Identity=27.7777777777778, Blast_Score=65, Evalue=3e-11,
Organism=Homo sapiens, GI73747917, Length=155, Percent_Identity=33.5483870967742, Blast_Score=65, Evalue=3e-11,
Organism=Homo sapiens, GI153792144, Length=163, Percent_Identity=31.9018404907975, Blast_Score=64, Evalue=6e-11,
Organism=Escherichia coli, GI87082064, Length=192, Percent_Identity=37.5, Blast_Score=107, Evalue=6e-25,
Organism=Escherichia coli, GI87081782, Length=173, Percent_Identity=28.9017341040462, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1786803, Length=176, Percent_Identity=34.6590909090909, Blast_Score=78, Evalue=3e-16,
Organism=Escherichia coli, GI1786319, Length=171, Percent_Identity=30.4093567251462, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1787370, Length=159, Percent_Identity=30.8176100628931, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI1788761, Length=152, Percent_Identity=38.1578947368421, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI48994943, Length=171, Percent_Identity=28.6549707602339, Blast_Score=68, Evalue=4e-13,
Organism=Escherichia coli, GI1790739, Length=197, Percent_Identity=27.4111675126904, Blast_Score=67, Evalue=8e-13,
Organism=Escherichia coli, GI1786345, Length=160, Percent_Identity=32.5, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1788165, Length=168, Percent_Identity=30.3571428571429, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1790467, Length=179, Percent_Identity=30.7262569832402, Blast_Score=65, Evalue=2e-12,
Organism=Escherichia coli, GI1787758, Length=160, Percent_Identity=30, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI87082267, Length=155, Percent_Identity=30.3225806451613, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI87081791, Length=157, Percent_Identity=31.2101910828025, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI1786398, Length=147, Percent_Identity=36.734693877551, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI87081709, Length=158, Percent_Identity=27.2151898734177, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1786654, Length=161, Percent_Identity=31.6770186335404, Blast_Score=61, Evalue=4e-11,
Organism=Escherichia coli, GI1786563, Length=148, Percent_Identity=31.0810810810811, Blast_Score=61, Evalue=5e-11,
Organism=Escherichia coli, GI1788225, Length=156, Percent_Identity=32.0512820512821, Blast_Score=60, Evalue=9e-11,
Organism=Escherichia coli, GI1787712, Length=148, Percent_Identity=29.7297297297297, Blast_Score=60, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI193211017, Length=166, Percent_Identity=29.5180722891566, Blast_Score=70, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI193211015, Length=166, Percent_Identity=29.5180722891566, Blast_Score=70, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI71996809, Length=166, Percent_Identity=28.9156626506024, Blast_Score=69, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17539902, Length=205, Percent_Identity=26.3414634146341, Blast_Score=68, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI212646699, Length=171, Percent_Identity=28.6549707602339, Blast_Score=68, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17510237, Length=150, Percent_Identity=30, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17567265, Length=175, Percent_Identity=29.7142857142857, Blast_Score=64, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6324985, Length=188, Percent_Identity=25, Blast_Score=64, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6320874, Length=164, Percent_Identity=31.0975609756098, Blast_Score=63, Evalue=4e-11,
Organism=Drosophila melanogaster, GI161076682, Length=188, Percent_Identity=34.0425531914894, Blast_Score=78, Evalue=4e-15,
Organism=Drosophila melanogaster, GI161076684, Length=188, Percent_Identity=34.0425531914894, Blast_Score=78, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24581617, Length=188, Percent_Identity=34.0425531914894, Blast_Score=78, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24581615, Length=188, Percent_Identity=34.0425531914894, Blast_Score=78, Evalue=4e-15,
Organism=Drosophila melanogaster, GI19920532, Length=184, Percent_Identity=29.8913043478261, Blast_Score=75, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24580930, Length=184, Percent_Identity=29.8913043478261, Blast_Score=75, Evalue=2e-14,
Organism=Drosophila melanogaster, GI28574744, Length=175, Percent_Identity=34.2857142857143, Blast_Score=74, Evalue=5e-14,
Organism=Drosophila melanogaster, GI85724864, Length=187, Percent_Identity=31.0160427807487, Blast_Score=71, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24580555, Length=187, Percent_Identity=31.0160427807487, Blast_Score=71, Evalue=4e-13,
Organism=Drosophila melanogaster, GI85816269, Length=187, Percent_Identity=31.0160427807487, Blast_Score=71, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24580553, Length=187, Percent_Identity=31.0160427807487, Blast_Score=71, Evalue=4e-13,
Organism=Drosophila melanogaster, GI28574533, Length=196, Percent_Identity=29.5918367346939, Blast_Score=67, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24581191, Length=173, Percent_Identity=30.635838150289, Blast_Score=66, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24581189, Length=173, Percent_Identity=30.635838150289, Blast_Score=66, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24581193, Length=173, Percent_Identity=30.635838150289, Blast_Score=66, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24581195, Length=173, Percent_Identity=30.635838150289, Blast_Score=66, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24666836, Length=177, Percent_Identity=32.7683615819209, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI281361582, Length=177, Percent_Identity=32.2033898305085, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI45550390, Length=187, Percent_Identity=27.2727272727273, Blast_Score=64, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR005895
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: =3.6.3.41 [H]

Molecular weight: Translated: 21509; Mature: 21378

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MAVSALVGEKLACRRGFKLLFEHLDVTARSGRALLVVGPNGAGKSSLLRILSGLLGATEG
CCCHHHHHHHHHHHHHHHHHHHHHCCEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCC
KVRLDGPGLEAADTGVGEHIHYLGHEDAVKGALTVRANLAFWRTVLGPTGLPVEDALEEV
EEEECCCCCCCCCCCCCHHHHHCCCCHHHCCEEEEEHHHHHHHHHHCCCCCCHHHHHHHC
GLGGLGGLRAQVLSAGQKRRLAIARLLVSRRPVWVLDEPTTALDVKAQARFAAFGRGHLA
CCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCCCEEEHHHHHHHHHCCCCCCC
EGGILIAATHAPLDLGDVDELRLGGVG
CCCEEEEEECCCCCCCCCCCEECCCCC
>Mature Secondary Structure 
AVSALVGEKLACRRGFKLLFEHLDVTARSGRALLVVGPNGAGKSSLLRILSGLLGATEG
CCHHHHHHHHHHHHHHHHHHHHHCCEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCC
KVRLDGPGLEAADTGVGEHIHYLGHEDAVKGALTVRANLAFWRTVLGPTGLPVEDALEEV
EEEECCCCCCCCCCCCCHHHHHCCCCHHHCCEEEEEHHHHHHHHHHCCCCCCHHHHHHHC
GLGGLGGLRAQVLSAGQKRRLAIARLLVSRRPVWVLDEPTTALDVKAQARFAAFGRGHLA
CCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCCCEEEHHHHHHHHHCCCCCCC
EGGILIAATHAPLDLGDVDELRLGGVG
CCCEEEEEECCCCCCCCCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA