Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
---|---|
Accession | NC_009720 |
Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is 154247732
Identifier: 154247732
GI number: 154247732
Start: 4222572
End: 4223858
Strand: Direct
Name: 154247732
Synonym: Xaut_3808
Alternate gene names: NA
Gene position: 4222572-4223858 (Clockwise)
Preceding gene: 154247727
Following gene: 154247737
Centisome position: 79.54
GC content: 62.63
Gene sequence:
>1287_bases TTGCATATTGCCACAAAGCAGCCCGAGTTTTCCCCTGGCCTGACGTGCAGTGAGAGATGTGAAATTCCGGATTTAGAATT CGGGCCGGTCTGCGCTATGCACGTGAACAAGCAGACAGGGGAGACGGGCTTGAGAATCGTTGTCATGGGTTCTTCGCCGG GTGTGGAGAATGCCTACCGACTAGATGGCAAGACGCTGAACGGACTGCTGGGCGGGAACACCGGCAATCTTGCTTTTGTC TATGCCATCGCCAGCCATCTTGGTGGCGCGGCTGCCGATGGAAAGCCCGAGCCGGTGCGCGTCGTGCCTTGGCACGTTCC GGCGGCGGATCTGAGGGGGACGGCGGATCTTATCGTGCTGGCCTGCGCAAACCAGCTGGGGCCCCATGCTGACCTTGGCA CCCATGCGGCCAATCTCGAAGCCATCGGGCTTCCCGTGGTGGCGCTGGGGCTTGGAGCGCAGGCGGCAAGTCGCGACGAA GAGGCAGTGATTCCTGACGGCACGAAGAAGTGGCTGGATGTCATCGGGCGCCTGGCACCGGGCAAGGCGCCGAACATCGG CGTACGTGGCGAATACACTTTGCGCCAGCTGGAGCGCCTTGGCTGTGGCGACCGCGGCATCGTCATGGGCTGCCCGTCCA ATTTCATCAATCCGACCGATATTGCCGCGCTTGTTTCGGCGCGCCGCGAGGTTCCGGTGGGCCGGGTCGCCGCTGCCGTG GGGCAGCCCTACTGGCGGGAACTGGCTGAGATCGAGCGCGCCGTCCTCGATCTCGTGGATGAGAGCGATGGGTCCTGCAT CGTGCAGCACGGGCAGATCATGGTCGACCTTGGACAGGGCGAGCTTGCGACCATGTCGGAGAAGGACGTCGAGCTGCTGC GCAGCTATTTCCGGCCGCGCCTTTCAACGGACGAGTTCGCGCTCTGGTGCCGGCGCAACATGCTGGGCTTCGGCACTGTG CCGGGCTGGATGAACTGGCTCAAGCGGCACGATTTCGTGGTGGGGCCGCGCTTCCACGGCATCATGCTGGCGATCCAGGC GGGCGTGCCGGGTGGTTGCATCACCCACGACAGCCGGACGGCCGAGCTCTGCGACACCATGGGCATCCCCGCGCGCGCGG CGAGCGAGATGCCGAAGGTGCTGACGCGCAAGATGCTGCCGGAGCTTTTCCCCTTCGATGCCGAGGGCTATCGGAAGAAA CGCAAGGAACTCGGAGTCGCTTATGCATCGATTTTGCGCGGCGCTAATATAAATCTCAATCTAAGCACTGCCTCTATTAT TAATTGA
Upstream 100 bases:
>100_bases ACGACATGATCTTAACCCGCCCCAGCAGGGTCCAGAGGCAATGGCACCGTCCCCGCAATCCCCGACATGTCAATTAGAAC TCGCGTAAGGGGACGTCAAT
Downstream 100 bases:
>100_bases GATATTCCAAGGGGTGTATCTCAATCCATTAGACTTCGGACAAAGTTTTCAATTTGCGGGGCCCCGACGGTTACCTTCCG TAGCATCGGGGCCCCGTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 428; Mature: 428
Protein sequence:
>428_residues MHIATKQPEFSPGLTCSERCEIPDLEFGPVCAMHVNKQTGETGLRIVVMGSSPGVENAYRLDGKTLNGLLGGNTGNLAFV YAIASHLGGAAADGKPEPVRVVPWHVPAADLRGTADLIVLACANQLGPHADLGTHAANLEAIGLPVVALGLGAQAASRDE EAVIPDGTKKWLDVIGRLAPGKAPNIGVRGEYTLRQLERLGCGDRGIVMGCPSNFINPTDIAALVSARREVPVGRVAAAV GQPYWRELAEIERAVLDLVDESDGSCIVQHGQIMVDLGQGELATMSEKDVELLRSYFRPRLSTDEFALWCRRNMLGFGTV PGWMNWLKRHDFVVGPRFHGIMLAIQAGVPGGCITHDSRTAELCDTMGIPARAASEMPKVLTRKMLPELFPFDAEGYRKK RKELGVAYASILRGANINLNLSTASIIN
Sequences:
>Translated_428_residues MHIATKQPEFSPGLTCSERCEIPDLEFGPVCAMHVNKQTGETGLRIVVMGSSPGVENAYRLDGKTLNGLLGGNTGNLAFV YAIASHLGGAAADGKPEPVRVVPWHVPAADLRGTADLIVLACANQLGPHADLGTHAANLEAIGLPVVALGLGAQAASRDE EAVIPDGTKKWLDVIGRLAPGKAPNIGVRGEYTLRQLERLGCGDRGIVMGCPSNFINPTDIAALVSARREVPVGRVAAAV GQPYWRELAEIERAVLDLVDESDGSCIVQHGQIMVDLGQGELATMSEKDVELLRSYFRPRLSTDEFALWCRRNMLGFGTV PGWMNWLKRHDFVVGPRFHGIMLAIQAGVPGGCITHDSRTAELCDTMGIPARAASEMPKVLTRKMLPELFPFDAEGYRKK RKELGVAYASILRGANINLNLSTASIIN >Mature_428_residues MHIATKQPEFSPGLTCSERCEIPDLEFGPVCAMHVNKQTGETGLRIVVMGSSPGVENAYRLDGKTLNGLLGGNTGNLAFV YAIASHLGGAAADGKPEPVRVVPWHVPAADLRGTADLIVLACANQLGPHADLGTHAANLEAIGLPVVALGLGAQAASRDE EAVIPDGTKKWLDVIGRLAPGKAPNIGVRGEYTLRQLERLGCGDRGIVMGCPSNFINPTDIAALVSARREVPVGRVAAAV GQPYWRELAEIERAVLDLVDESDGSCIVQHGQIMVDLGQGELATMSEKDVELLRSYFRPRLSTDEFALWCRRNMLGFGTV PGWMNWLKRHDFVVGPRFHGIMLAIQAGVPGGCITHDSRTAELCDTMGIPARAASEMPKVLTRKMLPELFPFDAEGYRKK RKELGVAYASILRGANINLNLSTASIIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45896; Mature: 45896
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHIATKQPEFSPGLTCSERCEIPDLEFGPVCAMHVNKQTGETGLRIVVMGSSPGVENAYR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCEEE LDGKTLNGLLGGNTGNLAFVYAIASHLGGAAADGKPEPVRVVPWHVPAADLRGTADLIVL ECCCEECCEECCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHCCCCHHHHHE ACANQLGPHADLGTHAANLEAIGLPVVALGLGAQAASRDEEAVIPDGTKKWLDVIGRLAP EHHHHCCCCCCCCCCCCCCEECCCCEEEEECCCHHCCCCCCCCCCCCHHHHHHHHHHCCC GKAPNIGVRGEYTLRQLERLGCGDRGIVMGCPSNFINPTDIAALVSARREVPVGRVAAAV CCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHH GQPYWRELAEIERAVLDLVDESDGSCIVQHGQIMVDLGQGELATMSEKDVELLRSYFRPR CCHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEECCCCCEECCCHHHHHHHHHHCCCC LSTDEFALWCRRNMLGFGTVPGWMNWLKRHDFVVGPRFHGIMLAIQAGVPGGCITHDSRT CCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCEEECCCCCEEEEEEECCCCCCEECCCCCH AELCDTMGIPARAASEMPKVLTRKMLPELFPFDAEGYRKKRKELGVAYASILRGANINLN HHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEE LSTASIIN ECHHHHCC >Mature Secondary Structure MHIATKQPEFSPGLTCSERCEIPDLEFGPVCAMHVNKQTGETGLRIVVMGSSPGVENAYR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCEEE LDGKTLNGLLGGNTGNLAFVYAIASHLGGAAADGKPEPVRVVPWHVPAADLRGTADLIVL ECCCEECCEECCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHCCCCHHHHHE ACANQLGPHADLGTHAANLEAIGLPVVALGLGAQAASRDEEAVIPDGTKKWLDVIGRLAP EHHHHCCCCCCCCCCCCCCEECCCCEEEEECCCHHCCCCCCCCCCCCHHHHHHHHHHCCC GKAPNIGVRGEYTLRQLERLGCGDRGIVMGCPSNFINPTDIAALVSARREVPVGRVAAAV CCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHH GQPYWRELAEIERAVLDLVDESDGSCIVQHGQIMVDLGQGELATMSEKDVELLRSYFRPR CCHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEECCCCCEECCCHHHHHHHHHHCCCC LSTDEFALWCRRNMLGFGTVPGWMNWLKRHDFVVGPRFHGIMLAIQAGVPGGCITHDSRT CCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCEEECCCCCEEEEEEECCCCCCEECCCCCH AELCDTMGIPARAASEMPKVLTRKMLPELFPFDAEGYRKKRKELGVAYASILRGANINLN HHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEE LSTASIIN ECHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA