Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
---|---|
Accession | NC_009720 |
Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is 154247726
Identifier: 154247726
GI number: 154247726
Start: 4207721
End: 4209121
Strand: Direct
Name: 154247726
Synonym: Xaut_3802
Alternate gene names: NA
Gene position: 4207721-4209121 (Clockwise)
Preceding gene: 154247725
Following gene: 154247727
Centisome position: 79.26
GC content: 66.38
Gene sequence:
>1401_bases ATGCCTCATTTCCCCGACGAAGGCCCGAAGCCTGTTACAGCCCACGCTCTCAGGGTTGCGCTCTTTGTCCACGCCTTCTT TCCGGAACATATCTACGGCACTGAATCCTATACGCTCGCGCTCGCGCGGCAGTTGCAAGCCCTTGGCCATTCTCCGGTCG TGATCACGGCGGTCAGCCCCGGCGAGCCGCCCCAGATGTCCGAGGTCGAGCGCTACACCATCGGCGACATTCCGGTTCTG CGCATCGACCGGAACTTGAGCCCGCCGCGCAATGCGCGCGAGGAGTACGACATGCCGGCCCTCGCTCCACTGCTGGAGCG CCTTCTCAGGGAGATCCGGCCGGACGTGGCTCACGTCTGCCATCTGGGCAATTTCTCCGTGGTCCTGCCTCAGGTGACCG AGGCGCTCGGCATTCCCACCTTTGCCACCCTGACGGATTTCTTCAACCTGTGCCTCAACAGCCTCCTCCAGCTTCCCGAC GGCGGCCTGTGCGCGGGTCCTGATGCGCGACGGCTCAACTGCATGACATGCGGCATCCTGATGCGTCGATCCGAGCGACC GAGTCCGTTTTGGGCTGCGCTGGCGCATCCAGCGGTGCATCACCTCGCAGCCCTTGCCGGAACCCGCCTTGCTCCGCTCC TGCCGCCACCGCTGGGAACCGATGCGCGGGCTGTGATCCGGCGGCCGAAGGCTTTCACGGCGGCCATGGGGCGGTACCAG GCAGCCATCGCGCCGACGCGCTACCTGAAGGATACATTCGAGGCCAATGGCGTCACCCTGCCTCTGGTACACAGCGCCTT CGGCATCGATATCGACCGGCGCCCCAAGCCGCCCGCCGGTGATCGCCCGGTGCGCTTCGGCTTCATCGGCCAGATTCTGA TGCACAAGGGGCCGCATCTGCTGCTCCAGGCGCTCCGGCTTCTGCCGGTGGACGCTTTCACCCTCGACATCTGGGGCTCC GACAAGCTTTATCCCGACTATGCGCGGGACCTGCGGAGCGTCGCCAGATCGATGCCAGTCAGTTTCAATGCGCCGTTCGC GGAACACCGGATGGCCGAGGTGCTTTCCCAGGTCGATGTCCTGGTGCTGCCGTCGACCTGGTTCGAGAACGGGCCGCTCA CCTTGCTCAAGGCGCTTGCGACCCACACCCCCGTGGTGGTTTCCGATGTTCCAGGCATGACCGAGTTCATCCAGGAGGGC ATCGACGGCTTCGCCTTCCCGCGTGGGGATGTGGACGCGCTCGCGGCGGTTCTGCGCCGGTTCGTGGAGGCTCCGGACCT CGCCCGCCGCATGAGCGCGGCCACGGCCTATCCGCGCACCGAGCGCGCCATGGCGCTGGAGGTGCTGGACCTCTATGCGC GCTTCGGAGGCCGCCCGGCGCCGGTGGCCGGCGCAGCATGA
Upstream 100 bases:
>100_bases CTCGCGTCAGAAATGTGAACTATCCAAATTACGGATCGCTTTTGGTCCTTCCCCAAGGGTAAAGTATTTCCAAGCGTGTG AATCATGTTGCCGAGAGTTG
Downstream 100 bases:
>100_bases GGATCGCCATCCTCAGTTCGGGCTATCTGCCGGTGCTGGATGGCGTCACCGTCAGCGTGGATGCGCGGGTCCAGCGGCTC GCGGCGCGCGGGCACGATGT
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: Glycosyl Transferase Group 1 Family Protein; Glycosyltransferase; LPS Biosynthesis RfbU Related Protein; Glycosyltransferase Forming Alpha Glycosyl Linkages
Number of amino acids: Translated: 466; Mature: 465
Protein sequence:
>466_residues MPHFPDEGPKPVTAHALRVALFVHAFFPEHIYGTESYTLALARQLQALGHSPVVITAVSPGEPPQMSEVERYTIGDIPVL RIDRNLSPPRNAREEYDMPALAPLLERLLREIRPDVAHVCHLGNFSVVLPQVTEALGIPTFATLTDFFNLCLNSLLQLPD GGLCAGPDARRLNCMTCGILMRRSERPSPFWAALAHPAVHHLAALAGTRLAPLLPPPLGTDARAVIRRPKAFTAAMGRYQ AAIAPTRYLKDTFEANGVTLPLVHSAFGIDIDRRPKPPAGDRPVRFGFIGQILMHKGPHLLLQALRLLPVDAFTLDIWGS DKLYPDYARDLRSVARSMPVSFNAPFAEHRMAEVLSQVDVLVLPSTWFENGPLTLLKALATHTPVVVSDVPGMTEFIQEG IDGFAFPRGDVDALAAVLRRFVEAPDLARRMSAATAYPRTERAMALEVLDLYARFGGRPAPVAGAA
Sequences:
>Translated_466_residues MPHFPDEGPKPVTAHALRVALFVHAFFPEHIYGTESYTLALARQLQALGHSPVVITAVSPGEPPQMSEVERYTIGDIPVL RIDRNLSPPRNAREEYDMPALAPLLERLLREIRPDVAHVCHLGNFSVVLPQVTEALGIPTFATLTDFFNLCLNSLLQLPD GGLCAGPDARRLNCMTCGILMRRSERPSPFWAALAHPAVHHLAALAGTRLAPLLPPPLGTDARAVIRRPKAFTAAMGRYQ AAIAPTRYLKDTFEANGVTLPLVHSAFGIDIDRRPKPPAGDRPVRFGFIGQILMHKGPHLLLQALRLLPVDAFTLDIWGS DKLYPDYARDLRSVARSMPVSFNAPFAEHRMAEVLSQVDVLVLPSTWFENGPLTLLKALATHTPVVVSDVPGMTEFIQEG IDGFAFPRGDVDALAAVLRRFVEAPDLARRMSAATAYPRTERAMALEVLDLYARFGGRPAPVAGAA >Mature_465_residues PHFPDEGPKPVTAHALRVALFVHAFFPEHIYGTESYTLALARQLQALGHSPVVITAVSPGEPPQMSEVERYTIGDIPVLR IDRNLSPPRNAREEYDMPALAPLLERLLREIRPDVAHVCHLGNFSVVLPQVTEALGIPTFATLTDFFNLCLNSLLQLPDG GLCAGPDARRLNCMTCGILMRRSERPSPFWAALAHPAVHHLAALAGTRLAPLLPPPLGTDARAVIRRPKAFTAAMGRYQA AIAPTRYLKDTFEANGVTLPLVHSAFGIDIDRRPKPPAGDRPVRFGFIGQILMHKGPHLLLQALRLLPVDAFTLDIWGSD KLYPDYARDLRSVARSMPVSFNAPFAEHRMAEVLSQVDVLVLPSTWFENGPLTLLKALATHTPVVVSDVPGMTEFIQEGI DGFAFPRGDVDALAAVLRRFVEAPDLARRMSAATAYPRTERAMALEVLDLYARFGGRPAPVAGAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50962; Mature: 50831
Theoretical pI: Translated: 7.72; Mature: 7.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHFPDEGPKPVTAHALRVALFVHAFFPEHIYGTESYTLALARQLQALGHSPVVITAVSP CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEECC GEPPQMSEVERYTIGDIPVLRIDRNLSPPRNAREEYDMPALAPLLERLLREIRPDVAHVC CCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCHHHCCCCHHHHHHHHHHHHHCHHHHHHH HLGNFSVVLPQVTEALGIPTFATLTDFFNLCLNSLLQLPDGGLCAGPDARRLNCMTCGIL HCCCCEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHH MRRSERPSPFWAALAHPAVHHLAALAGTRLAPLLPPPLGTDARAVIRRPKAFTAAMGRYQ HHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHH AAIAPTRYLKDTFEANGVTLPLVHSAFGIDIDRRPKPPAGDRPVRFGFIGQILMHKGPHL HHHHHHHHHHHHHCCCCCEEEEEHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCHHH LLQALRLLPVDAFTLDIWGSDKLYPDYARDLRSVARSMPVSFNAPFAEHRMAEVLSQVDV HHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCE LVLPSTWFENGPLTLLKALATHTPVVVSDVPGMTEFIQEGIDGFAFPRGDVDALAAVLRR EEECCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHH FVEAPDLARRMSAATAYPRTERAMALEVLDLYARFGGRPAPVAGAA HHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure PHFPDEGPKPVTAHALRVALFVHAFFPEHIYGTESYTLALARQLQALGHSPVVITAVSP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEECC GEPPQMSEVERYTIGDIPVLRIDRNLSPPRNAREEYDMPALAPLLERLLREIRPDVAHVC CCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCHHHCCCCHHHHHHHHHHHHHCHHHHHHH HLGNFSVVLPQVTEALGIPTFATLTDFFNLCLNSLLQLPDGGLCAGPDARRLNCMTCGIL HCCCCEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHH MRRSERPSPFWAALAHPAVHHLAALAGTRLAPLLPPPLGTDARAVIRRPKAFTAAMGRYQ HHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHH AAIAPTRYLKDTFEANGVTLPLVHSAFGIDIDRRPKPPAGDRPVRFGFIGQILMHKGPHL HHHHHHHHHHHHHCCCCCEEEEEHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCHHH LLQALRLLPVDAFTLDIWGSDKLYPDYARDLRSVARSMPVSFNAPFAEHRMAEVLSQVDV HHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCE LVLPSTWFENGPLTLLKALATHTPVVVSDVPGMTEFIQEGIDGFAFPRGDVDALAAVLRR EEECCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHH FVEAPDLARRMSAATAYPRTERAMALEVLDLYARFGGRPAPVAGAA HHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA