Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
---|---|
Accession | NC_009720 |
Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is 154247699
Identifier: 154247699
GI number: 154247699
Start: 4182761
End: 4183489
Strand: Direct
Name: 154247699
Synonym: Xaut_3775
Alternate gene names: NA
Gene position: 4182761-4183489 (Clockwise)
Preceding gene: 154247698
Following gene: 154247700
Centisome position: 78.79
GC content: 72.29
Gene sequence:
>729_bases ATGGCGATCTTTCGCGCCCTCGTCTTCGCGGCGGCGCTTAGCGGGCTATTGGCCGGTCTCCTGATGACCGGGCTGCAGCA CGCGGCGACCACCCCTCTCATCCTGAAGGCCGAGACCTATGAGGAGGCGGCGCCTGCGCCTGCCTCCCATGATCATGGCT CGCACGATCATGGTACCGCCGGCCAGTCTGTCGCCGCGCCGCACGACCACGCCGATGCCTGGGCACCGTCCGACGGCGCC GAGCGCCTGCTCTACACCGCCCTCGCCAATGTGGTGGGCGCGGCGGGCTTCGCTCTGCTGCTGCTGGCGGTCTCCGAGGT GGCCGGCGGCCTTGCCGGCTGGCGCGACGGGCTCGCCTGGGGCGTCGCCGCCTTCGCCGCAGTCACCCTGGCCCCCAGCC TGAGCCTGCCGCCCGAGCTGCCCGCCATGCCGGCGGCGGATCTGTTTGCCCGTCAGGCATGGTGGATCGGCACGGCGGTG GCCACCGCCGCAGGTATCGCCCTGCTGGTCTACAAAAGGTCGTTGCCGCTGGCGGCGCTGGCCGTTGGGCTGATCGTGCT GCCGCATCTCATCGGCGCGCCGCAGCCCGACAGCCACGACAGCCCGGTGCCCGCCGGCCTCGCCCACGGTTTCGTGGTGG CGGTGGTGGTGACGAGCTTCGTATTCTGGGCGGTGCTCGGCGCGCTGGCGGGGCTGCTGCGGCAGCGGTTCACCCGGTCG GCCGCTTGA
Upstream 100 bases:
>100_bases CGGCGGCGTCGGCTTCTCCGGTATTCCGGTGCTGCACAATGCGGCGCACGATTACCGCCATTCCACCGGCTTCCCCTGCC ACTGAGGGGAGCTTTCAGCC
Downstream 100 bases:
>100_bases GCGGCGGCCTCGTCCTGGTCCTCGGCGGCGCGCGCTCCGGCAAGAGCCGCTTCGCTGAAGGCGAGGTCCGGCGCCAGCCG GCGCCTTGGGCCTATATCGC
Product: cobalt transporter subunit CbtA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MAIFRALVFAAALSGLLAGLLMTGLQHAATTPLILKAETYEEAAPAPASHDHGSHDHGTAGQSVAAPHDHADAWAPSDGA ERLLYTALANVVGAAGFALLLLAVSEVAGGLAGWRDGLAWGVAAFAAVTLAPSLSLPPELPAMPAADLFARQAWWIGTAV ATAAGIALLVYKRSLPLAALAVGLIVLPHLIGAPQPDSHDSPVPAGLAHGFVVAVVVTSFVFWAVLGALAGLLRQRFTRS AA
Sequences:
>Translated_242_residues MAIFRALVFAAALSGLLAGLLMTGLQHAATTPLILKAETYEEAAPAPASHDHGSHDHGTAGQSVAAPHDHADAWAPSDGA ERLLYTALANVVGAAGFALLLLAVSEVAGGLAGWRDGLAWGVAAFAAVTLAPSLSLPPELPAMPAADLFARQAWWIGTAV ATAAGIALLVYKRSLPLAALAVGLIVLPHLIGAPQPDSHDSPVPAGLAHGFVVAVVVTSFVFWAVLGALAGLLRQRFTRS AA >Mature_241_residues AIFRALVFAAALSGLLAGLLMTGLQHAATTPLILKAETYEEAAPAPASHDHGSHDHGTAGQSVAAPHDHADAWAPSDGAE RLLYTALANVVGAAGFALLLLAVSEVAGGLAGWRDGLAWGVAAFAAVTLAPSLSLPPELPAMPAADLFARQAWWIGTAVA TAAGIALLVYKRSLPLAALAVGLIVLPHLIGAPQPDSHDSPVPAGLAHGFVVAVVVTSFVFWAVLGALAGLLRQRFTRSA A
Specific function: Unknown
COG id: COG5446
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24555; Mature: 24423
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIFRALVFAAALSGLLAGLLMTGLQHAATTPLILKAETYEEAAPAPASHDHGSHDHGTA CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHCCCCCCCCCCCCCCCCC GQSVAAPHDHADAWAPSDGAERLLYTALANVVGAAGFALLLLAVSEVAGGLAGWRDGLAW CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVAAFAAVTLAPSLSLPPELPAMPAADLFARQAWWIGTAVATAAGIALLVYKRSLPLAAL HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH AVGLIVLPHLIGAPQPDSHDSPVPAGLAHGFVVAVVVTSFVFWAVLGALAGLLRQRFTRS HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC AA CC >Mature Secondary Structure AIFRALVFAAALSGLLAGLLMTGLQHAATTPLILKAETYEEAAPAPASHDHGSHDHGTA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHCCCCCCCCCCCCCCCCC GQSVAAPHDHADAWAPSDGAERLLYTALANVVGAAGFALLLLAVSEVAGGLAGWRDGLAW CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVAAFAAVTLAPSLSLPPELPAMPAADLFARQAWWIGTAVATAAGIALLVYKRSLPLAAL HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH AVGLIVLPHLIGAPQPDSHDSPVPAGLAHGFVVAVVVTSFVFWAVLGALAGLLRQRFTRS HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC AA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA