Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154247693
Identifier: 154247693
GI number: 154247693
Start: 4176784
End: 4177305
Strand: Direct
Name: 154247693
Synonym: Xaut_3769
Alternate gene names: NA
Gene position: 4176784-4177305 (Clockwise)
Preceding gene: 154247692
Following gene: 154247694
Centisome position: 78.67
GC content: 61.69
Gene sequence:
>522_bases TTGTGCCTCGGCGCACGGACCTTAGCTGCCCGTTTTACCGAGGATGACATGAACGACACCTTCATCAAGGCCTATCAGGA TCAAGTCGAAGCCGCGAAAAAGGCGTTCTCGAGCCATGCCGTTCCCGGCGTGGAAGTGCCGGCCGGCGTGCGCGAGATTG CCGAAAAGGGTCTCGCCACCTTCCGCGAGAACTATACCAAGCTCAAGGGTTCCGCCGATCAGGTGAATGCGGCGTTCGAA GACACCTATACCAGCGCCAGCAAGGGCGTGGCGGAATACAACGCCAAGGTGCTCGAGGCTGTTCAATCGAACGTGAACGC GGCGCTCGACTATTTCAATTCTCTGCTCGGCACCAAGACGGTGAGCGAGGCCGTGGAGCTGTCCACCGGCCACGCCCGCA AGCAGTTCGAAGTGCTCACCTCCCAGGCGAAGGACCTGTCCGCGCTCGCCCAGAAGGTGGCCGCCGACTCGTCCGAGCCG CTGAAGGCTTCGGTCGAGAAGACCTTCCGTACCGCCGCGTGA
Upstream 100 bases:
>100_bases TTAGGATACAGTCACAAAGTCGAGGTTTCACAGCCGTTACCGCTCTTGTTCGAAGGTCTGATGCTGGCGCTCCGCCATCG TCCTCCTCGCAGGTGCGGGT
Downstream 100 bases:
>100_bases GATGACGTTCGGTCCGGCCCTGCCGGACCGTCCGATCCCGGCCGCTTGCCCGCCGCGTGCGTTGCTTGACGCTTGACGCG GCGGGTCCGCCTTGCAATGA
Product: phasin
Products: NA
Alternate protein names: Phasin 2 Protein
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MCLGARTLAARFTEDDMNDTFIKAYQDQVEAAKKAFSSHAVPGVEVPAGVREIAEKGLATFRENYTKLKGSADQVNAAFE DTYTSASKGVAEYNAKVLEAVQSNVNAALDYFNSLLGTKTVSEAVELSTGHARKQFEVLTSQAKDLSALAQKVAADSSEP LKASVEKTFRTAA
Sequences:
>Translated_173_residues MCLGARTLAARFTEDDMNDTFIKAYQDQVEAAKKAFSSHAVPGVEVPAGVREIAEKGLATFRENYTKLKGSADQVNAAFE DTYTSASKGVAEYNAKVLEAVQSNVNAALDYFNSLLGTKTVSEAVELSTGHARKQFEVLTSQAKDLSALAQKVAADSSEP LKASVEKTFRTAA >Mature_173_residues MCLGARTLAARFTEDDMNDTFIKAYQDQVEAAKKAFSSHAVPGVEVPAGVREIAEKGLATFRENYTKLKGSADQVNAAFE DTYTSASKGVAEYNAKVLEAVQSNVNAALDYFNSLLGTKTVSEAVELSTGHARKQFEVLTSQAKDLSALAQKVAADSSEP LKASVEKTFRTAA
Specific function: Unknown
COG id: COG5490
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18520; Mature: 18520
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCLGARTLAARFTEDDMNDTFIKAYQDQVEAAKKAFSSHAVPGVEVPAGVREIAEKGLAT CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH FRENYTKLKGSADQVNAAFEDTYTSASKGVAEYNAKVLEAVQSNVNAALDYFNSLLGTKT HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSEAVELSTGHARKQFEVLTSQAKDLSALAQKVAADSSEPLKASVEKTFRTAA HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MCLGARTLAARFTEDDMNDTFIKAYQDQVEAAKKAFSSHAVPGVEVPAGVREIAEKGLAT CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH FRENYTKLKGSADQVNAAFEDTYTSASKGVAEYNAKVLEAVQSNVNAALDYFNSLLGTKT HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSEAVELSTGHARKQFEVLTSQAKDLSALAQKVAADSSEPLKASVEKTFRTAA HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA