Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154247672
Identifier: 154247672
GI number: 154247672
Start: 4151692
End: 4152594
Strand: Direct
Name: 154247672
Synonym: Xaut_3748
Alternate gene names: NA
Gene position: 4151692-4152594 (Clockwise)
Preceding gene: 154247671
Following gene: 154247675
Centisome position: 78.2
GC content: 71.43
Gene sequence:
>903_bases TTGGGCCTGTTTGCCGATAACCTCCGATCCATGACCCTTCCCAGCCCTTCATCCCGTCTCTTCCGGTCGGGCATGGTGCG CCGCTTCGCTGTCGGCGTGCTTGGCCTGCTGATGGTCGGCGCCCCCTTCGTCTCCGGTCCCGCCTTGGCCTGTCCCAGTG ACGTGCGTCCCGCGCCGCCCCTGGTGCTGGCGCAGGCCGCCAGGGTGCGGGCCGAGGGACGGCCGCTGCGCATCCTCGCC ATCGGCTCCTCCACCACCGCCGGGGCGGGGGCCTCCAGCACGGCTGCCAACTACCCGAGCCAACTGGCCCTGAGGCTGGA GGCGGCGCTGGGGGAGGGGAGCGTCGAGATCACCAATGCCGGCGTCAACGGCGAGAGCGCGCCCGCCACACTGCGCCGGC TGGAACTGTTCCTGAAGACGCCGCCGGTGCCGGACCTGGTGCTTTGGCAGGTGGGCACCAACGATGTCATCTTCGGCGGC GATCCTGTGCGGCTGAAGCAGCTGGTGGGGGCTGGGCTCGATGCCATTGCGGCGGCGGGCGCGGCGGTGCTGGTGATCGA CCAGCAATACTACCCGGCCATCATGAACCTCGACCGCTACGAAAGCTTCGTGGCCGCCGTAGGCGCGGCCGCTTCCGAGC GGGGGGCGCCGCTGCTCCCGCGCTACCTGATGATGAAGCAATGGGCGGCACAGGATCCGGCAGGGCTGCGCGCCACGCTA GCCTGGGACAGCTTCCATTCCAACGACAAGGGCTATGCCTGCCTTGCCGACCTGCTGGCGCCGGCCATCGTGTCGGCCAT GGCGGCGCCCGCCACGGCGCCACAGGGCCCGCCGCAGGCCAAGGGGACCCCGCCCAAGGGGGCCAACGCCAGGCAGCCGC CGGCCGCTCCGGCCCTGCGCTGA
Upstream 100 bases:
>100_bases TTTCGTGCAAGTTTCGTCCCTGACCTTCGCGCTTGCGGCCTTGCGTTGTATCGCTATCGCTTTGGCGGGGCCTTGCGTTC CGCCGGTGAGACGACGCACT
Downstream 100 bases:
>100_bases GGCCCGTCGGAAGGTCTGGGGCGGCTGCCGTTCCCAGGCACTCACGGCTACCGCTCCAAACTCCTGCCTTGACGCGTGTT CTTCACGCGAACCGGTATCC
Product: GDSL family lipase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MGLFADNLRSMTLPSPSSRLFRSGMVRRFAVGVLGLLMVGAPFVSGPALACPSDVRPAPPLVLAQAARVRAEGRPLRILA IGSSTTAGAGASSTAANYPSQLALRLEAALGEGSVEITNAGVNGESAPATLRRLELFLKTPPVPDLVLWQVGTNDVIFGG DPVRLKQLVGAGLDAIAAAGAAVLVIDQQYYPAIMNLDRYESFVAAVGAAASERGAPLLPRYLMMKQWAAQDPAGLRATL AWDSFHSNDKGYACLADLLAPAIVSAMAAPATAPQGPPQAKGTPPKGANARQPPAAPALR
Sequences:
>Translated_300_residues MGLFADNLRSMTLPSPSSRLFRSGMVRRFAVGVLGLLMVGAPFVSGPALACPSDVRPAPPLVLAQAARVRAEGRPLRILA IGSSTTAGAGASSTAANYPSQLALRLEAALGEGSVEITNAGVNGESAPATLRRLELFLKTPPVPDLVLWQVGTNDVIFGG DPVRLKQLVGAGLDAIAAAGAAVLVIDQQYYPAIMNLDRYESFVAAVGAAASERGAPLLPRYLMMKQWAAQDPAGLRATL AWDSFHSNDKGYACLADLLAPAIVSAMAAPATAPQGPPQAKGTPPKGANARQPPAAPALR >Mature_299_residues GLFADNLRSMTLPSPSSRLFRSGMVRRFAVGVLGLLMVGAPFVSGPALACPSDVRPAPPLVLAQAARVRAEGRPLRILAI GSSTTAGAGASSTAANYPSQLALRLEAALGEGSVEITNAGVNGESAPATLRRLELFLKTPPVPDLVLWQVGTNDVIFGGD PVRLKQLVGAGLDAIAAAGAAVLVIDQQYYPAIMNLDRYESFVAAVGAAASERGAPLLPRYLMMKQWAAQDPAGLRATLA WDSFHSNDKGYACLADLLAPAIVSAMAAPATAPQGPPQAKGTPPKGANARQPPAAPALR
Specific function: Unknown
COG id: COG2755
COG function: function code E; Lysophospholipase L1 and related esterases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30920; Mature: 30789
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLFADNLRSMTLPSPSSRLFRSGMVRRFAVGVLGLLMVGAPFVSGPALACPSDVRPAPP CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC LVLAQAARVRAEGRPLRILAIGSSTTAGAGASSTAANYPSQLALRLEAALGEGSVEITNA HHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEC GVNGESAPATLRRLELFLKTPPVPDLVLWQVGTNDVIFGGDPVRLKQLVGAGLDAIAAAG CCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCEEECCCHHHHHHHHCCCHHHHHHCC AAVLVIDQQYYPAIMNLDRYESFVAAVGAAASERGAPLLPRYLMMKQWAAQDPAGLRATL EEEEEECCCHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEE AWDSFHSNDKGYACLADLLAPAIVSAMAAPATAPQGPPQAKGTPPKGANARQPPAAPALR EECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GLFADNLRSMTLPSPSSRLFRSGMVRRFAVGVLGLLMVGAPFVSGPALACPSDVRPAPP CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC LVLAQAARVRAEGRPLRILAIGSSTTAGAGASSTAANYPSQLALRLEAALGEGSVEITNA HHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEC GVNGESAPATLRRLELFLKTPPVPDLVLWQVGTNDVIFGGDPVRLKQLVGAGLDAIAAAG CCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCEEECCCHHHHHHHHCCCHHHHHHCC AAVLVIDQQYYPAIMNLDRYESFVAAVGAAASERGAPLLPRYLMMKQWAAQDPAGLRATL EEEEEECCCHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEE AWDSFHSNDKGYACLADLLAPAIVSAMAAPATAPQGPPQAKGTPPKGANARQPPAAPALR EECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA