Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154247671
Identifier: 154247671
GI number: 154247671
Start: 4149835
End: 4151274
Strand: Direct
Name: 154247671
Synonym: Xaut_3747
Alternate gene names: NA
Gene position: 4149835-4151274 (Clockwise)
Preceding gene: 154247669
Following gene: 154247672
Centisome position: 78.17
GC content: 66.6
Gene sequence:
>1440_bases ATGCTTTCAAAGCGTCATTTCCTGAAGATCCTCGCCGCCGGCGGGCTCACCGCGCCGGCCCTCGTGCCCGGCCTGTCCCG GGCGGCGTCAGCTCCCGATCGCCCCGGCTTCTTCAAGGCGAAGGAAATCGCCGAGGCCGGCTTCATCTACGGCCTGCCGC TGGTGATGAACTATGGGGTGATGTACGAATACGTGGTCGACAAGACCTCGGGCCAGTTCAAGGCCCCGTTCAACCAGATC TACAACGAAGCCCGCGTCTTCACCTATCAGGACACCTCGGTCCCCACGCCCAACAGCGACACGCCCTATTCGCTGGGCTG GCTGGACCTGCGCGCCGAGCCGCAGGTCATCTCGGTGCCGGCGGTGGATCCCAAGCGCTATTATTCGGTCCAGCTGGTGG ACGGCAACACCTTCAACTACGGCTATATCGGCAGCCGTTCCACGGGCAACGACGCCGGCGACTTCCTGGTCGTCGGGCCG CGCTGGACCGGCGAGACGCCGCCCGGAATCCGCAAGGTCTTCCGCGCCAGCACCGACTTTGCCCTGACCATCTTCCGCAC CCAGCTGTTCGATGCCGCCGACATCGACAACGTGAAGAAGGTGCAGGCGGGCTACCAGCTGCGGCCGCTCTCCGCCTTCC TTGGCAAGGCGGCGCCGCCGGCCGCGCCGGTGCCGGACTTCCCCAAGTTCACCAAGGACCTCGCGCGCACGGACTTCTTC GAGTTCCTCGACTTCGCGCTGCAATTCTCCCCCGCCCTGCCGGAGGAGCGCGAGATCCGCGCGCAGCTGGCCACCATCGG CGTCGGGGCCGGCAAGAGCTTCGATTTCAAGACCCTCTCGCTGGAGGACAAGGCCGAGATCCTGCTCGGCCTCAAGGAGG GCCAGCGCAAGGTGACCGAGGCGGTGGCGGCCTTCGGCACGAACTTCAACGGTTGGCGGGTGGGCTCGCCCGCGGGCGAC GCCGCCTTCTTCAATGGCGACTGGCTGCTGCGGGCGGTGGGGGCCCAGGCCGGCATCTATGGCAATGACGCCGTGGAAGC CACCTACCCGATGACGCGCCTGGATGCCGACGGCCAGACCCTCGACGGCTCCAAGCACAATTACACCCTGACCTTCCCGG CCGATGGCCTGCCGCCGGTCAACGCCTTCTGGTCGGTGACCATGTATGATGGCGTGAACCAGCTGCTCATCAAGAACCCC ATCGACCGCTACCTCATCAACTCGCCCATGCTGCCGAACCTGAAGCGCAACGCCGACGGGTCGGTCACCCTCCTCATCCA GAACAAGTCCCCCGGCCCGGACAAGGAGAGCAACTGGCTGCCCGCGCCGGACGGCCCCATCTACCTGGTGATGCGCCTCT ACTGGCCCAAGGAAACGCCCCCCTCCATCCTCCCCGCCGGCAAGGGCACCTGGCAGCCGCCGGGCATCCGGAAGGCCTGA
Upstream 100 bases:
>100_bases TTCCTGGGTGAAATTCGGACGGGACGAATGGCTGTGGCCAAGCTAAGGTCCCGCCGGTGTCAAGAGTGACGACACCCTTC CCAATAAAAGAAGGTCGCCC
Downstream 100 bases:
>100_bases TCTAAGGACGAGTCACTCCCTGCAAATGAGTGGTTCCGGCCCCGTGGGCGGGGTGGTGTCTCGCCACCCCAGCCAAGGGG GCACCTCAGCCCGAACGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 479; Mature: 479
Protein sequence:
>479_residues MLSKRHFLKILAAGGLTAPALVPGLSRAASAPDRPGFFKAKEIAEAGFIYGLPLVMNYGVMYEYVVDKTSGQFKAPFNQI YNEARVFTYQDTSVPTPNSDTPYSLGWLDLRAEPQVISVPAVDPKRYYSVQLVDGNTFNYGYIGSRSTGNDAGDFLVVGP RWTGETPPGIRKVFRASTDFALTIFRTQLFDAADIDNVKKVQAGYQLRPLSAFLGKAAPPAAPVPDFPKFTKDLARTDFF EFLDFALQFSPALPEEREIRAQLATIGVGAGKSFDFKTLSLEDKAEILLGLKEGQRKVTEAVAAFGTNFNGWRVGSPAGD AAFFNGDWLLRAVGAQAGIYGNDAVEATYPMTRLDADGQTLDGSKHNYTLTFPADGLPPVNAFWSVTMYDGVNQLLIKNP IDRYLINSPMLPNLKRNADGSVTLLIQNKSPGPDKESNWLPAPDGPIYLVMRLYWPKETPPSILPAGKGTWQPPGIRKA
Sequences:
>Translated_479_residues MLSKRHFLKILAAGGLTAPALVPGLSRAASAPDRPGFFKAKEIAEAGFIYGLPLVMNYGVMYEYVVDKTSGQFKAPFNQI YNEARVFTYQDTSVPTPNSDTPYSLGWLDLRAEPQVISVPAVDPKRYYSVQLVDGNTFNYGYIGSRSTGNDAGDFLVVGP RWTGETPPGIRKVFRASTDFALTIFRTQLFDAADIDNVKKVQAGYQLRPLSAFLGKAAPPAAPVPDFPKFTKDLARTDFF EFLDFALQFSPALPEEREIRAQLATIGVGAGKSFDFKTLSLEDKAEILLGLKEGQRKVTEAVAAFGTNFNGWRVGSPAGD AAFFNGDWLLRAVGAQAGIYGNDAVEATYPMTRLDADGQTLDGSKHNYTLTFPADGLPPVNAFWSVTMYDGVNQLLIKNP IDRYLINSPMLPNLKRNADGSVTLLIQNKSPGPDKESNWLPAPDGPIYLVMRLYWPKETPPSILPAGKGTWQPPGIRKA >Mature_479_residues MLSKRHFLKILAAGGLTAPALVPGLSRAASAPDRPGFFKAKEIAEAGFIYGLPLVMNYGVMYEYVVDKTSGQFKAPFNQI YNEARVFTYQDTSVPTPNSDTPYSLGWLDLRAEPQVISVPAVDPKRYYSVQLVDGNTFNYGYIGSRSTGNDAGDFLVVGP RWTGETPPGIRKVFRASTDFALTIFRTQLFDAADIDNVKKVQAGYQLRPLSAFLGKAAPPAAPVPDFPKFTKDLARTDFF EFLDFALQFSPALPEEREIRAQLATIGVGAGKSFDFKTLSLEDKAEILLGLKEGQRKVTEAVAAFGTNFNGWRVGSPAGD AAFFNGDWLLRAVGAQAGIYGNDAVEATYPMTRLDADGQTLDGSKHNYTLTFPADGLPPVNAFWSVTMYDGVNQLLIKNP IDRYLINSPMLPNLKRNADGSVTLLIQNKSPGPDKESNWLPAPDGPIYLVMRLYWPKETPPSILPAGKGTWQPPGIRKA
Specific function: Unknown
COG id: COG5361
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52383; Mature: 52383
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSKRHFLKILAAGGLTAPALVPGLSRAASAPDRPGFFKAKEIAEAGFIYGLPLVMNYGV CCCHHHHHHHHHCCCCCCHHHHHCHHHHCCCCCCCCCCHHHHHHHCCCEECCHHHHCCCE MYEYVVDKTSGQFKAPFNQIYNEARVFTYQDTSVPTPNSDTPYSLGWLDLRAEPQVISVP EEEEEEECCCCCEECCHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEEEECCCCCEEEEC AVDPKRYYSVQLVDGNTFNYGYIGSRSTGNDAGDFLVVGPRWTGETPPGIRKVFRASTDF CCCCCCEEEEEEECCCEECCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHCCCCE ALTIFRTQLFDAADIDNVKKVQAGYQLRPLSAFLGKAAPPAAPVPDFPKFTKDLARTDFF EEEEEHHHHCCCCCCCCHHHHHCCCEEEHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH EFLDFALQFSPALPEEREIRAQLATIGVGAGKSFDFKTLSLEDKAEILLGLKEGQRKVTE HHHHHHHHCCCCCCHHHHHHHHHHEEECCCCCCCCEEEECCCCCCCEEEEHHHHHHHHHH AVAAFGTNFNGWRVGSPAGDAAFFNGDWLLRAVGAQAGIYGNDAVEATYPMTRLDADGQT HHHHHCCCCCCEECCCCCCCCEEECCCEEEEECCCCCCCCCCCCCEECCCCEEECCCCCC LDGSKHNYTLTFPADGLPPVNAFWSVTMYDGVNQLLIKNPIDRYLINSPMLPNLKRNADG CCCCCCEEEEEECCCCCCCCCCEEEEEECCCCHHHHHCCCHHHHHCCCCCCCCCCCCCCC SVTLLIQNKSPGPDKESNWLPAPDGPIYLVMRLYWPKETPPSILPAGKGTWQPPGIRKA CEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLSKRHFLKILAAGGLTAPALVPGLSRAASAPDRPGFFKAKEIAEAGFIYGLPLVMNYGV CCCHHHHHHHHHCCCCCCHHHHHCHHHHCCCCCCCCCCHHHHHHHCCCEECCHHHHCCCE MYEYVVDKTSGQFKAPFNQIYNEARVFTYQDTSVPTPNSDTPYSLGWLDLRAEPQVISVP EEEEEEECCCCCEECCHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEEEECCCCCEEEEC AVDPKRYYSVQLVDGNTFNYGYIGSRSTGNDAGDFLVVGPRWTGETPPGIRKVFRASTDF CCCCCCEEEEEEECCCEECCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHCCCCE ALTIFRTQLFDAADIDNVKKVQAGYQLRPLSAFLGKAAPPAAPVPDFPKFTKDLARTDFF EEEEEHHHHCCCCCCCCHHHHHCCCEEEHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH EFLDFALQFSPALPEEREIRAQLATIGVGAGKSFDFKTLSLEDKAEILLGLKEGQRKVTE HHHHHHHHCCCCCCHHHHHHHHHHEEECCCCCCCCEEEECCCCCCCEEEEHHHHHHHHHH AVAAFGTNFNGWRVGSPAGDAAFFNGDWLLRAVGAQAGIYGNDAVEATYPMTRLDADGQT HHHHHCCCCCCEECCCCCCCCEEECCCEEEEECCCCCCCCCCCCCEECCCCEEECCCCCC LDGSKHNYTLTFPADGLPPVNAFWSVTMYDGVNQLLIKNPIDRYLINSPMLPNLKRNADG CCCCCCEEEEEECCCCCCCCCCEEEEEECCCCHHHHHCCCHHHHHCCCCCCCCCCCCCCC SVTLLIQNKSPGPDKESNWLPAPDGPIYLVMRLYWPKETPPSILPAGKGTWQPPGIRKA CEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA