Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
---|---|
Accession | NC_009720 |
Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is 154247651
Identifier: 154247651
GI number: 154247651
Start: 4130769
End: 4131950
Strand: Direct
Name: 154247651
Synonym: Xaut_3726
Alternate gene names: NA
Gene position: 4130769-4131950 (Clockwise)
Preceding gene: 154247650
Following gene: 154247652
Centisome position: 77.81
GC content: 68.7
Gene sequence:
>1182_bases ATGGCAAAACCCACGTATCCCATCGAGAAGGTGGCGCCCACCTATCGCCCGCTGTGGGACCGCGCCAAGATCAATGCGGC CGGCTCCCGTGTCACCGCCGCCGCGAATCTGGTGCTCGCCGGCAAGTCCCGTTACCTCGCTGTGGAGGCCGCTACCGGCG CGCCCTGGTGGTGGGTGGGTGTCATCCACTACCGCGAGAGCGCCTGTGATTTCGCCGGCGTCTTGCATAACGGCGAAGAG ATCATCGGGACCGGACGGAAGACGACGCTGGTGCCCGAGGGCCGAGGCCCCTTCAAGACCTGGCAGGCCGGGGCGATCGA CGCCCTCCTCATCAAGGGGATCAAGCCCGGCTCTCACGTCTGGACGCTCGGCACCGCCCTCTACAAGGGGGAGGAGTTCA ACGGCTTCGGTTACCGGGCGCGCCGGACGCCCAGCGCCTACCTGTGGAGCGGCACCACCATCTACATGGGCGGCAAGTAC ATCCGGGATCACGTCTGGTCTCCGACCGCCATGGACAAGCAGCTGGGGATCGTCCCCATCATCATGAAGCTGATGGAATT GGACGACAGCGTGCGCTTCGCGGATGAGGCGGAGGTCATCCCGGCTGGTCCGGCAGCGGCGTCGGCTACCGATGCTCCGG CGCCGGCGGAGATCAACCCTGATGACGGTCTATCCAAGGGCGAGATCGAGGCGCTCCAGCAGCGCCTGCGCGACCTCGGC TATTCCGAGGTGGGGCGGGTGGATGGCAAGTGGGGTCCGCGCACCATCGCGGCGGTGAGCGCCTTTCAGGCGACCTCGGG CCTGCCGGTCACCGGAGAGTTGGACAAGGCCACGGCCGCGGCGCTCACCACCTCCGGCCCGCGCCCCGTCTCGGCCGAGC GCAAGAGCACCACGGCGACGGACCTGCGCAAGGCGGGAGACCCGGTCGCCAAGGCCAGCTTCCTCAACAAGGTCTGTTCG GCGGTCGCGGGCTTCTTCGCGCTGATCTTCGGTGCGGCGCAGGAGAGCGGCACGGCGGTGGGCTACCTGTCGCCGGTGCG TGAGTTTGTCACCGACGTGCCGCCCATGGTCTGGTTCGGTGCCGTGGCGACTGTGGCGGCCGTCATCTGGTGGCAGGCCA ACCGAGCCGAGCGCGCCGCCGTCGCCGATGTGCGCAGCGGGCGGGATGCGGGGCCGGCATGA
Upstream 100 bases:
>100_bases AATGCAGAGCTAACCGCCCTCCGCCCATCCCCCATCACACTCTGCGCCGGCCCGCCTCTCGCCAGGGAGCGCGGCCGTGC GCGCATGCAAGGACCCATCC
Downstream 100 bases:
>100_bases GCGCGCTGATCGCTGCCGCGCTTGCCTCGGTCTGGATCATCCCGGCCGTCTCGGGCCTCGCCGCCGGCATCGTCGCCGGC TGCTTCGGTGGGGATTGGGG
Product: peptidoglycan binding domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MAKPTYPIEKVAPTYRPLWDRAKINAAGSRVTAAANLVLAGKSRYLAVEAATGAPWWWVGVIHYRESACDFAGVLHNGEE IIGTGRKTTLVPEGRGPFKTWQAGAIDALLIKGIKPGSHVWTLGTALYKGEEFNGFGYRARRTPSAYLWSGTTIYMGGKY IRDHVWSPTAMDKQLGIVPIIMKLMELDDSVRFADEAEVIPAGPAAASATDAPAPAEINPDDGLSKGEIEALQQRLRDLG YSEVGRVDGKWGPRTIAAVSAFQATSGLPVTGELDKATAAALTTSGPRPVSAERKSTTATDLRKAGDPVAKASFLNKVCS AVAGFFALIFGAAQESGTAVGYLSPVREFVTDVPPMVWFGAVATVAAVIWWQANRAERAAVADVRSGRDAGPA
Sequences:
>Translated_393_residues MAKPTYPIEKVAPTYRPLWDRAKINAAGSRVTAAANLVLAGKSRYLAVEAATGAPWWWVGVIHYRESACDFAGVLHNGEE IIGTGRKTTLVPEGRGPFKTWQAGAIDALLIKGIKPGSHVWTLGTALYKGEEFNGFGYRARRTPSAYLWSGTTIYMGGKY IRDHVWSPTAMDKQLGIVPIIMKLMELDDSVRFADEAEVIPAGPAAASATDAPAPAEINPDDGLSKGEIEALQQRLRDLG YSEVGRVDGKWGPRTIAAVSAFQATSGLPVTGELDKATAAALTTSGPRPVSAERKSTTATDLRKAGDPVAKASFLNKVCS AVAGFFALIFGAAQESGTAVGYLSPVREFVTDVPPMVWFGAVATVAAVIWWQANRAERAAVADVRSGRDAGPA >Mature_392_residues AKPTYPIEKVAPTYRPLWDRAKINAAGSRVTAAANLVLAGKSRYLAVEAATGAPWWWVGVIHYRESACDFAGVLHNGEEI IGTGRKTTLVPEGRGPFKTWQAGAIDALLIKGIKPGSHVWTLGTALYKGEEFNGFGYRARRTPSAYLWSGTTIYMGGKYI RDHVWSPTAMDKQLGIVPIIMKLMELDDSVRFADEAEVIPAGPAAASATDAPAPAEINPDDGLSKGEIEALQQRLRDLGY SEVGRVDGKWGPRTIAAVSAFQATSGLPVTGELDKATAAALTTSGPRPVSAERKSTTATDLRKAGDPVAKASFLNKVCSA VAGFFALIFGAAQESGTAVGYLSPVREFVTDVPPMVWFGAVATVAAVIWWQANRAERAAVADVRSGRDAGPA
Specific function: Unknown
COG id: COG5526
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41746; Mature: 41615
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKPTYPIEKVAPTYRPLWDRAKINAAGSRVTAAANLVLAGKSRYLAVEAATGAPWWWVG CCCCCCCHHHHCCCCCCCHHCCEECCCCCEEEHEEEEEEECCCEEEEEEECCCCCEEEEE VIHYRESACDFAGVLHNGEEIIGTGRKTTLVPEGRGPFKTWQAGAIDALLIKGIKPGSHV EEHHHHHHHHHHHHHCCCHHHEECCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCE WTLGTALYKGEEFNGFGYRARRTPSAYLWSGTTIYMGGKYIRDHVWSPTAMDKQLGIVPI EEHHHHHHCCCCCCCCCCEECCCCCEEEECCEEEEECCHHHHHHCCCCCCCCHHCCHHHH IMKLMELDDSVRFADEAEVIPAGPAAASATDAPAPAEINPDDGLSKGEIEALQQRLRDLG HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC YSEVGRVDGKWGPRTIAAVSAFQATSGLPVTGELDKATAAALTTSGPRPVSAERKSTTAT HHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHH DLRKAGDPVAKASFLNKVCSAVAGFFALIFGAAQESGTAVGYLSPVREFVTDVPPMVWFG HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCHHHHHH AVATVAAVIWWQANRAERAAVADVRSGRDAGPA HHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure AKPTYPIEKVAPTYRPLWDRAKINAAGSRVTAAANLVLAGKSRYLAVEAATGAPWWWVG CCCCCCHHHHCCCCCCCHHCCEECCCCCEEEHEEEEEEECCCEEEEEEECCCCCEEEEE VIHYRESACDFAGVLHNGEEIIGTGRKTTLVPEGRGPFKTWQAGAIDALLIKGIKPGSHV EEHHHHHHHHHHHHHCCCHHHEECCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCE WTLGTALYKGEEFNGFGYRARRTPSAYLWSGTTIYMGGKYIRDHVWSPTAMDKQLGIVPI EEHHHHHHCCCCCCCCCCEECCCCCEEEECCEEEEECCHHHHHHCCCCCCCCHHCCHHHH IMKLMELDDSVRFADEAEVIPAGPAAASATDAPAPAEINPDDGLSKGEIEALQQRLRDLG HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC YSEVGRVDGKWGPRTIAAVSAFQATSGLPVTGELDKATAAALTTSGPRPVSAERKSTTAT HHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHH DLRKAGDPVAKASFLNKVCSAVAGFFALIFGAAQESGTAVGYLSPVREFVTDVPPMVWFG HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCHHHHHH AVATVAAVIWWQANRAERAAVADVRSGRDAGPA HHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA