Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154247579
Identifier: 154247579
GI number: 154247579
Start: 4069406
End: 4070110
Strand: Direct
Name: 154247579
Synonym: Xaut_3652
Alternate gene names: NA
Gene position: 4069406-4070110 (Clockwise)
Preceding gene: 154247578
Following gene: 154247580
Centisome position: 76.65
GC content: 59.43
Gene sequence:
>705_bases ATGGCCGATGCTCCCTTCACCGTAGACGACTATGTCGGCCTTATCACCTCGGAGCACCGAGGGAAGGCGCGGTTCACAGC TACGGTTCGTGCGACCGTGCAGCCGGCGGCGGACACGCAGGCGTTTCTTGATGACCTGCCCGGCGCCTTCGATCTGGATA GCGCGATTGGCGTCCAGCTTGATGCGGTGGGAGCATGGGTCGGCATCTCCCGGCTCATCTCCATTCCCCTCATCACGGTC TGGTTCTCATGGGGTATCGTCGGGCGGGGATGGGGTGAAGGCATCTGGAAAGGACCTTACGACCCCGAGACCGGCATCTA TGCCCTTGATGACGACACGTACCGCAAGCTCATCCGCCTCAAGATCCTGGTGAACAACTGGGATGGATTGACGGGCTCTG CGGCCAGCGCGTTTGAAGACTTCTATGCCTCGGACGGCAGCTATCCGTTCATCCTCGATAATGAGGACATGAGCATGACG GCCTGCATCTCTGGTGCCCGCCCTCCTGCGATCATGTTCGCCATTTTTGCCGGGCGTTACGTTGAGTTCAAGCCGGCGTC TGTCCGCATCCTGAATGTCGTCCCGTCTGTCCCAAATACGCCAGCATTCGGGTTCGGCGTTGACAACGAATACATCGCGG GATGGGGAACGGGCTCTTGGGTCCGCGACGCTGAAGAAGCGATGATCGAAGAGCTTTCAGTCTAA
Upstream 100 bases:
>100_bases TCGCACGGGGCACGGACAGTCCCGGCTCGGCTAATCTGACGTTCGCCTATCATGAGGCCCCGGCCTGTTCCGTCGATGAC ATCACAATCACGGTGATCTG
Downstream 100 bases:
>100_bases GCCCAACAACACCGACACGCAACGAACCGTCACGCACGCGAAAGCGGGCGCTGGCGGCGCTTTGTCTTGGAGCCCTCATG GCAACGAATGATTTTCTTCC
Product: putative bacteriophage protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MADAPFTVDDYVGLITSEHRGKARFTATVRATVQPAADTQAFLDDLPGAFDLDSAIGVQLDAVGAWVGISRLISIPLITV WFSWGIVGRGWGEGIWKGPYDPETGIYALDDDTYRKLIRLKILVNNWDGLTGSAASAFEDFYASDGSYPFILDNEDMSMT ACISGARPPAIMFAIFAGRYVEFKPASVRILNVVPSVPNTPAFGFGVDNEYIAGWGTGSWVRDAEEAMIEELSV
Sequences:
>Translated_234_residues MADAPFTVDDYVGLITSEHRGKARFTATVRATVQPAADTQAFLDDLPGAFDLDSAIGVQLDAVGAWVGISRLISIPLITV WFSWGIVGRGWGEGIWKGPYDPETGIYALDDDTYRKLIRLKILVNNWDGLTGSAASAFEDFYASDGSYPFILDNEDMSMT ACISGARPPAIMFAIFAGRYVEFKPASVRILNVVPSVPNTPAFGFGVDNEYIAGWGTGSWVRDAEEAMIEELSV >Mature_233_residues ADAPFTVDDYVGLITSEHRGKARFTATVRATVQPAADTQAFLDDLPGAFDLDSAIGVQLDAVGAWVGISRLISIPLITVW FSWGIVGRGWGEGIWKGPYDPETGIYALDDDTYRKLIRLKILVNNWDGLTGSAASAFEDFYASDGSYPFILDNEDMSMTA CISGARPPAIMFAIFAGRYVEFKPASVRILNVVPSVPNTPAFGFGVDNEYIAGWGTGSWVRDAEEAMIEELSV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25406; Mature: 25275
Theoretical pI: Translated: 4.07; Mature: 4.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADAPFTVDDYVGLITSEHRGKARFTATVRATVQPAADTQAFLDDLPGAFDLDSAIGVQL CCCCCCCHHHHHHEEECCCCCCEEEEEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCEEE DAVGAWVGISRLISIPLITVWFSWGIVGRGWGEGIWKGPYDPETGIYALDDDTYRKLIRL EHHHHHHHHHHHHHHHHHEEHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHEEE KILVNNWDGLTGSAASAFEDFYASDGSYPFILDNEDMSMTACISGARPPAIMFAIFAGRY EEEEECCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCEEEEEECCCCCHHHHHEEHHCCE VEFKPASVRILNVVPSVPNTPAFGFGVDNEYIAGWGTGSWVRDAEEAMIEELSV EEECCCCEEEEEEECCCCCCCCEECCCCCCEEEECCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure ADAPFTVDDYVGLITSEHRGKARFTATVRATVQPAADTQAFLDDLPGAFDLDSAIGVQL CCCCCCHHHHHHEEECCCCCCEEEEEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCEEE DAVGAWVGISRLISIPLITVWFSWGIVGRGWGEGIWKGPYDPETGIYALDDDTYRKLIRL EHHHHHHHHHHHHHHHHHEEHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHEEE KILVNNWDGLTGSAASAFEDFYASDGSYPFILDNEDMSMTACISGARPPAIMFAIFAGRY EEEEECCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCEEEEEECCCCCHHHHHEEHHCCE VEFKPASVRILNVVPSVPNTPAFGFGVDNEYIAGWGTGSWVRDAEEAMIEELSV EEECCCCEEEEEEECCCCCCCCEECCCCCCEEEECCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA