Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154247578
Identifier: 154247578
GI number: 154247578
Start: 4068237
End: 4069406
Strand: Direct
Name: 154247578
Synonym: Xaut_3651
Alternate gene names: NA
Gene position: 4068237-4069406 (Clockwise)
Preceding gene: 154247577
Following gene: 154247579
Centisome position: 76.63
GC content: 60.0
Gene sequence:
>1170_bases ATGGCGATTACATGCACCATCGACGCGACTGGCATTACGGCTCCCTCTCTGGACGATGTCCGGACGTGGCTCGTTGGGCA GTACCAGTCGATCTATGGGTCAGATGTTTATCTTGAGCCCGACAGCCAAGACGGTCAGTGGATCGGCATTCTAGCAACGG CACTTCATGACGCCAACTCCATGTGCGTCTCGACCTACAACGCGTTCTCCCCTGCTACGGCACAGGGGGAGGGCCTGTCC CGAATGGTGAAGATCAACGGGCTTTCCCGGCATGTCGCATCTAAGTCCCAGGTTGACCTCCTTCTCGGCGGCACGGCGGG GACGACCATCGCCGGGGGCTACGCCACGGATGATACCGGCAACAAGTGGATGCTGCCGGATAGCGTCGTCATTGGAATGG CAGGGCAGATCACAGTAACCGCAACCGCAGCCGATGCCGGCGCGGTCACTGCAACTGCTGGCTCGGTTACGACCATAGGA ACCCCGACGCGGGGCTGGCAGACGGTCACGAACCTTCTTGCTGCGGTTGAGGGCGACCCAATCGAGACGGATCTGGAACT GCGCCAGCGGCAGGCGGTCTCGACTGAGATCCCGTCGCAGACGATCTTTGAAGGACTTGTCGGCGCCGTGGCGGCTGTGG CTGGGGTGACCCGCTATGGCGGTGTGGACAACGACACGGACGCCACGGACGAAAACGGCATTCCGGGGCATTCGTTCTCT CTTGTGATCGAGGGCGGGGATGCGGCGACCATCGCTCAGACGATCTACACCAAGAAGGGGCCGGGGGCTGGGACGTGGGG CACGACTTCTGAAGTTGTAGTGGACAGCTATGGCGTACCGCACACCATCAAGTTCATGCGCCCGACAAACATCCCGGTTG TCGTCGCACTTACGCTCAAGGCTCTCACTGGATACACATCGAACATTGGGGCCAAGATCAAGACGGCCGTGGCCGAATAT ATCAATGATCTGGCGATTGGTGATGAGGTTTACCTCACCCGCCTCTTCGTTCCGGCAAACCTGTCTGGAAGTGCCGATAG TGTGACCTTCGATATCACCGGCCTCCTCATCGCACGGGGCACGGACAGTCCCGGCTCGGCTAATCTGACGTTCGCCTATC ATGAGGCCCCGGCCTGTTCCGTCGATGACATCACAATCACGGTGATCTGA
Upstream 100 bases:
>100_bases CTGACCAGTTGGCTCAGGAAGCCGAAACCGCGACCGACGTGATTGACGCGGTCTATGGGCAACTCGACTTCTCCAACCCC TTCCAGTCCGGGTGGCTCTG
Downstream 100 bases:
>100_bases TGGCCGATGCTCCCTTCACCGTAGACGACTATGTCGGCCTTATCACCTCGGAGCACCGAGGGAAGGCGCGGTTCACAGCT ACGGTTCGTGCGACCGTGCA
Product: putative bacteriophage protein
Products: NA
Alternate protein names: Baseplate J Family Protein
Number of amino acids: Translated: 389; Mature: 388
Protein sequence:
>389_residues MAITCTIDATGITAPSLDDVRTWLVGQYQSIYGSDVYLEPDSQDGQWIGILATALHDANSMCVSTYNAFSPATAQGEGLS RMVKINGLSRHVASKSQVDLLLGGTAGTTIAGGYATDDTGNKWMLPDSVVIGMAGQITVTATAADAGAVTATAGSVTTIG TPTRGWQTVTNLLAAVEGDPIETDLELRQRQAVSTEIPSQTIFEGLVGAVAAVAGVTRYGGVDNDTDATDENGIPGHSFS LVIEGGDAATIAQTIYTKKGPGAGTWGTTSEVVVDSYGVPHTIKFMRPTNIPVVVALTLKALTGYTSNIGAKIKTAVAEY INDLAIGDEVYLTRLFVPANLSGSADSVTFDITGLLIARGTDSPGSANLTFAYHEAPACSVDDITITVI
Sequences:
>Translated_389_residues MAITCTIDATGITAPSLDDVRTWLVGQYQSIYGSDVYLEPDSQDGQWIGILATALHDANSMCVSTYNAFSPATAQGEGLS RMVKINGLSRHVASKSQVDLLLGGTAGTTIAGGYATDDTGNKWMLPDSVVIGMAGQITVTATAADAGAVTATAGSVTTIG TPTRGWQTVTNLLAAVEGDPIETDLELRQRQAVSTEIPSQTIFEGLVGAVAAVAGVTRYGGVDNDTDATDENGIPGHSFS LVIEGGDAATIAQTIYTKKGPGAGTWGTTSEVVVDSYGVPHTIKFMRPTNIPVVVALTLKALTGYTSNIGAKIKTAVAEY INDLAIGDEVYLTRLFVPANLSGSADSVTFDITGLLIARGTDSPGSANLTFAYHEAPACSVDDITITVI >Mature_388_residues AITCTIDATGITAPSLDDVRTWLVGQYQSIYGSDVYLEPDSQDGQWIGILATALHDANSMCVSTYNAFSPATAQGEGLSR MVKINGLSRHVASKSQVDLLLGGTAGTTIAGGYATDDTGNKWMLPDSVVIGMAGQITVTATAADAGAVTATAGSVTTIGT PTRGWQTVTNLLAAVEGDPIETDLELRQRQAVSTEIPSQTIFEGLVGAVAAVAGVTRYGGVDNDTDATDENGIPGHSFSL VIEGGDAATIAQTIYTKKGPGAGTWGTTSEVVVDSYGVPHTIKFMRPTNIPVVVALTLKALTGYTSNIGAKIKTAVAEYI NDLAIGDEVYLTRLFVPANLSGSADSVTFDITGLLIARGTDSPGSANLTFAYHEAPACSVDDITITVI
Specific function: Unknown
COG id: COG3299
COG function: function code S; Uncharacterized homolog of phage Mu protein gp47
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40176; Mature: 40045
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAITCTIDATGITAPSLDDVRTWLVGQYQSIYGSDVYLEPDSQDGQWIGILATALHDANS CEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEEHHHCCCC MCVSTYNAFSPATAQGEGLSRMVKINGLSRHVASKSQVDLLLGGTAGTTIAGGYATDDTG EEEEECCCCCCCCCCCCCCEEEEEECCHHHHHCCCCCEEEEEECCCCCEEECCEEECCCC NKWMLPDSVVIGMAGQITVTATAADAGAVTATAGSVTTIGTPTRGWQTVTNLLAAVEGDP CEEECCCCEEEECCCEEEEEEECCCCCCEEECCCCEEECCCCCCCHHHHHHHHHHCCCCC IETDLELRQRQAVSTEIPSQTIFEGLVGAVAAVAGVTRYGGVDNDTDATDENGIPGHSFS CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEE LVIEGGDAATIAQTIYTKKGPGAGTWGTTSEVVVDSYGVPHTIKFMRPTNIPVVVALTLK EEEECCCCHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCEEEEEEHH ALTGYTSNIGAKIKTAVAEYINDLAIGDEVYLTRLFVPANLSGSADSVTFDITGLLIARG HHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCEEEEEEEEEEEEEC TDSPGSANLTFAYHEAPACSVDDITITVI CCCCCCCEEEEEEECCCCCCCCCEEEEEC >Mature Secondary Structure AITCTIDATGITAPSLDDVRTWLVGQYQSIYGSDVYLEPDSQDGQWIGILATALHDANS EEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEEHHHCCCC MCVSTYNAFSPATAQGEGLSRMVKINGLSRHVASKSQVDLLLGGTAGTTIAGGYATDDTG EEEEECCCCCCCCCCCCCCEEEEEECCHHHHHCCCCCEEEEEECCCCCEEECCEEECCCC NKWMLPDSVVIGMAGQITVTATAADAGAVTATAGSVTTIGTPTRGWQTVTNLLAAVEGDP CEEECCCCEEEECCCEEEEEEECCCCCCEEECCCCEEECCCCCCCHHHHHHHHHHCCCCC IETDLELRQRQAVSTEIPSQTIFEGLVGAVAAVAGVTRYGGVDNDTDATDENGIPGHSFS CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEE LVIEGGDAATIAQTIYTKKGPGAGTWGTTSEVVVDSYGVPHTIKFMRPTNIPVVVALTLK EEEECCCCHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCEEEEEEHH ALTGYTSNIGAKIKTAVAEYINDLAIGDEVYLTRLFVPANLSGSADSVTFDITGLLIARG HHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCEEEEEEEEEEEEEC TDSPGSANLTFAYHEAPACSVDDITITVI CCCCCCCEEEEEEECCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA