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The map label for this gene is ssb [H]

Identifier: 154247549

GI number: 154247549

Start: 4040807

End: 4041283

Strand: Direct

Name: ssb [H]

Synonym: Xaut_3622

Alternate gene names: 154247549

Gene position: 4040807-4041283 (Clockwise)

Preceding gene: 154247548

Following gene: 154247550

Centisome position: 76.11

GC content: 56.39

Gene sequence:

>477_bases
ATGGCTGGATCTGTGAATAAGTGCATTATTGTCGGCCACTTGGGCCGTGATCCAGAGCTGAAAAGCTTTCAATCTGGTGG
TCGGGCCTGTAATCTGAGTGTCGCGACTTCCGAACACTGGCGTGACAAGGCGTCGGGGGACCGGAAAGAGCGGACTGAGT
GGCATTCTGTTGTGATCTACAACGAAAACTTGATTGGAGTAGCCGAGCGCTACCTCAAGAAGGGATCGAAAGTCTACCTC
GAAGGCCAGATCGAAACCCGGAAGTACGAGAAGGACGGCCGCGAGGTGTACACGACCGAAATAGTCCTCCGGCCCTATCG
CGGCGAGCTTGTATTGCTCGATAGCGCGCCAGATGAGCTGGGATCATCACAGGCGGTCGAATTTGGCTCCGGGGCTATCG
GAGGGCGGCGCGGCGCTGAACGGGCGCCAGCGGCTTCTGGAAGCGATTTTGACGATAGCTCCGATATCCCATTTTGA

Upstream 100 bases:

>100_bases
GCCCGCCCGGAAGGCGAGAAGGTCCGGCGCCGTCATCCCCCGAACCCTTCCGGCGTCGATCACTCGGAGCCGTACCACTT
CTCGGTCAAAGGTGAATGAC

Downstream 100 bases:

>100_bases
GGAGGCGGGAATGCAGCGGTTTATCGAGGCAGCTACGCCCTACCTCATGGGCGCGCTAATCGCGCTGACAGTGTGGGCAA
TGGCAGGGCGCGAAAAGTTG

Product: single-strand binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MAGSVNKCIIVGHLGRDPELKSFQSGGRACNLSVATSEHWRDKASGDRKERTEWHSVVIYNENLIGVAERYLKKGSKVYL
EGQIETRKYEKDGREVYTTEIVLRPYRGELVLLDSAPDELGSSQAVEFGSGAIGGRRGAERAPAASGSDFDDSSDIPF

Sequences:

>Translated_158_residues
MAGSVNKCIIVGHLGRDPELKSFQSGGRACNLSVATSEHWRDKASGDRKERTEWHSVVIYNENLIGVAERYLKKGSKVYL
EGQIETRKYEKDGREVYTTEIVLRPYRGELVLLDSAPDELGSSQAVEFGSGAIGGRRGAERAPAASGSDFDDSSDIPF
>Mature_157_residues
AGSVNKCIIVGHLGRDPELKSFQSGGRACNLSVATSEHWRDKASGDRKERTEWHSVVIYNENLIGVAERYLKKGSKVYLE
GQIETRKYEKDGREVYTTEIVLRPYRGELVLLDSAPDELGSSQAVEFGSGAIGGRRGAERAPAASGSDFDDSSDIPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Homo sapiens, GI4507231, Length=91, Percent_Identity=36.2637362637363, Blast_Score=67, Evalue=5e-12,
Organism=Escherichia coli, GI1790494, Length=100, Percent_Identity=54, Blast_Score=118, Evalue=2e-28,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 17324; Mature: 17193

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGSVNKCIIVGHLGRDPELKSFQSGGRACNLSVATSEHWRDKASGDRKERTEWHSVVIY
CCCCCCEEEEEEECCCCCCCHHHHCCCCEEEEEEECCHHHCCCCCCCCCCCCCEEEEEEE
NENLIGVAERYLKKGSKVYLEGQIETRKYEKDGREVYTTEIVLRPYRGELVLLDSAPDEL
CCCCHHHHHHHHHCCCEEEEEECCCCEEECCCCCEEEEEEEEEECCCCCEEEEECCCHHC
GSSQAVEFGSGAIGGRRGAERAPAASGSDFDDSSDIPF
CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AGSVNKCIIVGHLGRDPELKSFQSGGRACNLSVATSEHWRDKASGDRKERTEWHSVVIY
CCCCCEEEEEEECCCCCCCHHHHCCCCEEEEEEECCHHHCCCCCCCCCCCCCEEEEEEE
NENLIGVAERYLKKGSKVYLEGQIETRKYEKDGREVYTTEIVLRPYRGELVLLDSAPDEL
CCCCHHHHHHHHHCCCEEEEEECCCCEEECCCCCEEEEEEEEEECCCCCEEEEECCCHHC
GSSQAVEFGSGAIGGRRGAERAPAASGSDFDDSSDIPF
CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA