Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
---|---|
Accession | NC_009720 |
Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is 154247540
Identifier: 154247540
GI number: 154247540
Start: 4033983
End: 4034540
Strand: Direct
Name: 154247540
Synonym: Xaut_3613
Alternate gene names: NA
Gene position: 4033983-4034540 (Clockwise)
Preceding gene: 154247537
Following gene: 154247541
Centisome position: 75.98
GC content: 61.65
Gene sequence:
>558_bases ATGATGGAAATCGCCCGACCCCATCCTGATAAATCCGCCGCCGAAGAATTCAACGATGGATCCTTCGTGAGCTACTTCGA GCTTTGGGCCGACGACGTTACCCGGGGATCGCGGCAGCTTGGCTACTGGCGCGTGCCATTCGCCTTCGGGGTTCAGCTCC ATCGCATCCCAATAAGGGATGATGCCCGCGCCCTTTGGCCTGTCGATGCGCAGTTCCGTCATGGTGACACCCTCGTTGGA GCGCGACCGCAGGGTGACCCGGATCAAATGCCATGGGTGGGCGAAGCGCTCATCCTTGACGGTTTCGACCCCGACGATCG GCGAATGGATCGCCTGTTCACGTCTCCACGCCAGCCAGTGGAGAGCCAAGCTCCCGAAGCTGACCAGAAGGGCAAGCGAC GCAACAATCTCCGCATAGCCAATAGCCATGTCTTCACCATCGAATCGGTGTTGCAACCTTCGATGGTGGAGCATCCGCTG CCGGCCGGGCAATCCTGCCCTGACCTGTCCGTGCCGGCAGCGGGACGCGCCACATACGTCGGGCGGAGGGCTGCCTGA
Upstream 100 bases:
>100_bases TCTGGGAAATCAGGAAGGCGGTCAACCGGACGCTCGACGCGATCCGGCTGGTGGATGTCGAGGTCTGCCGGCTCTCGGGA AGCATCACGAGGAAATCCTC
Downstream 100 bases:
>100_bases TGTCCGAATTCACCCCCGTCACCACCATCGAAGACCTCATGTCACTCGACACCGTCGAGATGGTCGACGGCTATTGGGAT GGCTGGCACGGCGCTCCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MMEIARPHPDKSAAEEFNDGSFVSYFELWADDVTRGSRQLGYWRVPFAFGVQLHRIPIRDDARALWPVDAQFRHGDTLVG ARPQGDPDQMPWVGEALILDGFDPDDRRMDRLFTSPRQPVESQAPEADQKGKRRNNLRIANSHVFTIESVLQPSMVEHPL PAGQSCPDLSVPAAGRATYVGRRAA
Sequences:
>Translated_185_residues MMEIARPHPDKSAAEEFNDGSFVSYFELWADDVTRGSRQLGYWRVPFAFGVQLHRIPIRDDARALWPVDAQFRHGDTLVG ARPQGDPDQMPWVGEALILDGFDPDDRRMDRLFTSPRQPVESQAPEADQKGKRRNNLRIANSHVFTIESVLQPSMVEHPL PAGQSCPDLSVPAAGRATYVGRRAA >Mature_185_residues MMEIARPHPDKSAAEEFNDGSFVSYFELWADDVTRGSRQLGYWRVPFAFGVQLHRIPIRDDARALWPVDAQFRHGDTLVG ARPQGDPDQMPWVGEALILDGFDPDDRRMDRLFTSPRQPVESQAPEADQKGKRRNNLRIANSHVFTIESVLQPSMVEHPL PAGQSCPDLSVPAAGRATYVGRRAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20762; Mature: 20762
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMEIARPHPDKSAAEEFNDGSFVSYFELWADDVTRGSRQLGYWRVPFAFGVQLHRIPIRD CCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEECCHHHCEEEEEECCCC DARALWPVDAQFRHGDTLVGARPQGDPDQMPWVGEALILDGFDPDDRRMDRLFTSPRQPV CCCEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCC ESQAPEADQKGKRRNNLRIANSHVFTIESVLQPSMVEHPLPAGQSCPDLSVPAAGRATYV HHCCCCCHHHCCCCCCEEEECCEEEEHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCEECC GRRAA CCCCC >Mature Secondary Structure MMEIARPHPDKSAAEEFNDGSFVSYFELWADDVTRGSRQLGYWRVPFAFGVQLHRIPIRD CCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEECCHHHCEEEEEECCCC DARALWPVDAQFRHGDTLVGARPQGDPDQMPWVGEALILDGFDPDDRRMDRLFTSPRQPV CCCEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCC ESQAPEADQKGKRRNNLRIANSHVFTIESVLQPSMVEHPLPAGQSCPDLSVPAAGRATYV HHCCCCCHHHCCCCCCEEEECCEEEEHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCEECC GRRAA CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA