Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154246649
Identifier: 154246649
GI number: 154246649
Start: 3000939
End: 3003779
Strand: Reverse
Name: 154246649
Synonym: Xaut_2710
Alternate gene names: NA
Gene position: 3003779-3000939 (Counterclockwise)
Preceding gene: 154246650
Following gene: 154246648
Centisome position: 56.58
GC content: 65.08
Gene sequence:
>2841_bases ATGACAGGCGAAATGGTGAGCTTCAGCAGGATGCGAGGCGGCCACCGCCGTCATCTTCTGGCATTTTGCGCGCTCGTCGC GGTGTCCGCCGCGGGGTGCCTGCCCTCCCGGGCCCAGGCGCCGGATCGTGTCGACATCGGCGATTTCGACGCCAGCAAGC TCCCCCGCCTTCCCGGCGCCAAGGACGTTTTCGCCAGCCCGTTCACAACGATCTTCGTCTCGCCCCAGGCGATCGGCCCG ACGGCTGACGCGGTGGAAAAGGCGCTGGTCGCTCTCGGCTGGCAAAAATATGCCGCCCCCAACACCGCGTCTGCCGAAAA TCCGACAATGAGGACACTGACGCTGAAAAAGGGACGGCAGGCCCTCAACGTCTTCATCACGGTCGCCCCGGCCCAGAACA ACGCCATCAGCGTGCAGTATTCCGCCGTGCCGCTGAAGGTGGACCTGCCGTTCACCGCCGATGCCGCCGATATCGAATAT TCGCCCGACCGGCCATCCCTGAGCCTGGTCAGTGGCGAGCCGGTGGAAAAGCTTCTCGACTTCTACCGCCAGGAACTCGC CAGCCGCGGCTGGGTCCTGTGGTCGGCAAAGGCCAATGGCAAGCAGGCGCCGGGAGGTCCTTCGGGAACGCTCCATGAGA GGGGCGGCTTCGCTTACTTCGTCAGCGACCAGGAGCCGAAGGCGACCCTGGCGCTGGTGCTGCAAAAGACCGATGCCGGA AAGGTCAGAGTCGAGATCAAGCCCCAGCCGATCAGCGTTCTTGCGAACGAGCGCCAAGTCTATCTGGGTCGCGACAATGT CGCGCCGCCGGTCGCCGTGTCCGATCTGCCGCGCCTCCCCGGCGCGCGCGACACCGGGAAGTCGACCGCCGAGCGTGTGT CCTATTCGGTTCCCGGCAATGTTCCCGCCACCACCGCGGCGATCAAGGCGCTGCTGGCCGCTCAGGGCTGGACTTTCTAT CTGGTTCCGCTGGATGACCGGCATTCGACCTGGCTGACCTTCATCAAAGGACAGCAGGGCCTTTCGGTTCGTTTCACCAT TTCGCCCGGCCGGAACGAGGAAAACACGGACCAGACCACAGTCGAATACATGGCCGATCGGCTGCAATTCGCTCCGCCGG TTGCGGAGGACGCCGCCGAGGTGATGTTCGACGAGCATCGGCCCTATCTCAGCCTGATCTCGGGCGGCACACCGCAGAGC CTGCGCGAATTCTATGCCCGCACGCTTGCCGCCAGCGACTGGGAGCCGCTCCCGGAAGCGGACATCGCCACCAAATGGCC GAATGCGAAGCTCGATCCCAAGCCCGCCAATGGCGACATCGCCTATTTCATGCGCGGCAATGTCCGGCCGCTCATGCTCG TCCTGCGGACCACCGGCCAGGGCAGGACGCAGGTCGAGCTGAAAGCGCCCGCCTTCGCGGAGCTACAGTCGCTCGAAGCC GATAATGACATTTTCGGCCTGCCGGTGCCCAAGCCGCGCAAGAACGCGGGTGGCACCAATGGCGGGACCGGGCGGGAAAT CCACGCCCAGGTCATGGCGAGCCTTGAGGCGGTGTTGTCGTTCTACCGGGGTGCCCTTTCCGCGCGCGGGTGGAAAGAAG ATGCGCGCGCCATGGTCGGGCCGGAGGACGCGGAGGTGAATTTCACCTTTCCCGAGGGCACGGCGTCTTTAAAGCTCGCC CGCCAGTACGGGCTGACGACTGTCAGCCTCATTGAGAAGATCACCAAGCCCAAGCCCCAGAGCGTGGCCGGCTCCGCCTC GGTCAACGACATGCTGCAGCAGGCCCAGCAGATGATGCGCGACGCCGAGGCGCAAGCCGGGGTCCCCATCCAGCCGCCGG CCGCCGCGCGCGGGGCCGACGACGCCGTCCAGCCCCTGCAGCCGCTTGCCGGCGGCAATGCCCCCATTCCGCTCCCCGAG ACGGCGCAGGATATCGATTTCGACGGAGAGGACGGCACCCTCCAGTTCGCGAGCGCCTCCAGCGTCAAGTCGATCGCCGA GTTTTTCCGGTCGGCCCTGCAGCGGTCCGGATGGCGCGCGAAGCCGAGCGTGATCAACAACGCCAACATGGCGCAGCTTC AATTCGCCAAGGGGAACAAGGATCTCTCCATCACAGTGATGAAGATGGGCCCCAGCACCAATGTGAATGCGCGCGGCTCG GGCCTGCAGGTGGCGGCCGCGAAGCCCGACGCGCCTGCCGCAGGAAACCGAAGCGCGGGCAGCGCGCCGACGCCGGCGCC GTCGGCGGACGATCTCATCGTCGAGGAAAGCGCGGGGCTGCCCGTTCCCAAGCGCCACACCATGTCAGAAGGAACGCAGA CACCGTTCCGGCGCGAGCTCAACGCCAATGTACCGCTCGATCTCTCCGTGGTGCTTGAATTCTATCGCCGTGAGCTCGGT ACTCGAAACTGGAAAGAGGACGCCAAAAGCGTGGTGGTTGCAGCCGACCGTGCGACGGTTCGCTTCGCCTCCCCGGACGG GCCGGCCGCGTTGAAGCTCGGCCGAAAGGGCAATGAGACGACCGTCAACCTCTCTGTGAAAAATCCCGAGGCGGCCCGCA AAGCGGGCATCCTGCCGCCGGCCGGAAAGGCCCACGTGATGTTCGGCAATATCATGCCCGAGGACGCCTCGCTCACCTTC AATAACCGCACGATCAAGGTCGCGGCCAACGCCGGAACCAAGGGTCCCGATGGGCCGGCCCTGGATCTCGCCCCCGGAAA ATACAAATATTCGATCAAGACAGGGGGAAAGATCGATGCTGACGAGGTGGAGATACGCTCCGACGAGACCTGGGGACTGA TGATCGGACCGGGTGGTGTGCTGGCGTTGCAGGCCTATTGA
Upstream 100 bases:
>100_bases TGCTGAAGCGGGGCCTTCACAATCTGCCGTATTCATGGGAAGCATCGGCGTCGAAGGTCGTTTTGCCTTTCGGCGCAAGG CCCTTCCCCTGGAGGCGAGA
Downstream 100 bases:
>100_bases ACCGGGAGCCCTGGTTTCATCCGGGCAACTTCAACGGTGATGCAGGCGGCGGCGAGGGTGCCGGAGCTGTGTCCGGGGAT CGCGTGATGTGAATGCGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 946; Mature: 945
Protein sequence:
>946_residues MTGEMVSFSRMRGGHRRHLLAFCALVAVSAAGCLPSRAQAPDRVDIGDFDASKLPRLPGAKDVFASPFTTIFVSPQAIGP TADAVEKALVALGWQKYAAPNTASAENPTMRTLTLKKGRQALNVFITVAPAQNNAISVQYSAVPLKVDLPFTADAADIEY SPDRPSLSLVSGEPVEKLLDFYRQELASRGWVLWSAKANGKQAPGGPSGTLHERGGFAYFVSDQEPKATLALVLQKTDAG KVRVEIKPQPISVLANERQVYLGRDNVAPPVAVSDLPRLPGARDTGKSTAERVSYSVPGNVPATTAAIKALLAAQGWTFY LVPLDDRHSTWLTFIKGQQGLSVRFTISPGRNEENTDQTTVEYMADRLQFAPPVAEDAAEVMFDEHRPYLSLISGGTPQS LREFYARTLAASDWEPLPEADIATKWPNAKLDPKPANGDIAYFMRGNVRPLMLVLRTTGQGRTQVELKAPAFAELQSLEA DNDIFGLPVPKPRKNAGGTNGGTGREIHAQVMASLEAVLSFYRGALSARGWKEDARAMVGPEDAEVNFTFPEGTASLKLA RQYGLTTVSLIEKITKPKPQSVAGSASVNDMLQQAQQMMRDAEAQAGVPIQPPAAARGADDAVQPLQPLAGGNAPIPLPE TAQDIDFDGEDGTLQFASASSVKSIAEFFRSALQRSGWRAKPSVINNANMAQLQFAKGNKDLSITVMKMGPSTNVNARGS GLQVAAAKPDAPAAGNRSAGSAPTPAPSADDLIVEESAGLPVPKRHTMSEGTQTPFRRELNANVPLDLSVVLEFYRRELG TRNWKEDAKSVVVAADRATVRFASPDGPAALKLGRKGNETTVNLSVKNPEAARKAGILPPAGKAHVMFGNIMPEDASLTF NNRTIKVAANAGTKGPDGPALDLAPGKYKYSIKTGGKIDADEVEIRSDETWGLMIGPGGVLALQAY
Sequences:
>Translated_946_residues MTGEMVSFSRMRGGHRRHLLAFCALVAVSAAGCLPSRAQAPDRVDIGDFDASKLPRLPGAKDVFASPFTTIFVSPQAIGP TADAVEKALVALGWQKYAAPNTASAENPTMRTLTLKKGRQALNVFITVAPAQNNAISVQYSAVPLKVDLPFTADAADIEY SPDRPSLSLVSGEPVEKLLDFYRQELASRGWVLWSAKANGKQAPGGPSGTLHERGGFAYFVSDQEPKATLALVLQKTDAG KVRVEIKPQPISVLANERQVYLGRDNVAPPVAVSDLPRLPGARDTGKSTAERVSYSVPGNVPATTAAIKALLAAQGWTFY LVPLDDRHSTWLTFIKGQQGLSVRFTISPGRNEENTDQTTVEYMADRLQFAPPVAEDAAEVMFDEHRPYLSLISGGTPQS LREFYARTLAASDWEPLPEADIATKWPNAKLDPKPANGDIAYFMRGNVRPLMLVLRTTGQGRTQVELKAPAFAELQSLEA DNDIFGLPVPKPRKNAGGTNGGTGREIHAQVMASLEAVLSFYRGALSARGWKEDARAMVGPEDAEVNFTFPEGTASLKLA RQYGLTTVSLIEKITKPKPQSVAGSASVNDMLQQAQQMMRDAEAQAGVPIQPPAAARGADDAVQPLQPLAGGNAPIPLPE TAQDIDFDGEDGTLQFASASSVKSIAEFFRSALQRSGWRAKPSVINNANMAQLQFAKGNKDLSITVMKMGPSTNVNARGS GLQVAAAKPDAPAAGNRSAGSAPTPAPSADDLIVEESAGLPVPKRHTMSEGTQTPFRRELNANVPLDLSVVLEFYRRELG TRNWKEDAKSVVVAADRATVRFASPDGPAALKLGRKGNETTVNLSVKNPEAARKAGILPPAGKAHVMFGNIMPEDASLTF NNRTIKVAANAGTKGPDGPALDLAPGKYKYSIKTGGKIDADEVEIRSDETWGLMIGPGGVLALQAY >Mature_945_residues TGEMVSFSRMRGGHRRHLLAFCALVAVSAAGCLPSRAQAPDRVDIGDFDASKLPRLPGAKDVFASPFTTIFVSPQAIGPT ADAVEKALVALGWQKYAAPNTASAENPTMRTLTLKKGRQALNVFITVAPAQNNAISVQYSAVPLKVDLPFTADAADIEYS PDRPSLSLVSGEPVEKLLDFYRQELASRGWVLWSAKANGKQAPGGPSGTLHERGGFAYFVSDQEPKATLALVLQKTDAGK VRVEIKPQPISVLANERQVYLGRDNVAPPVAVSDLPRLPGARDTGKSTAERVSYSVPGNVPATTAAIKALLAAQGWTFYL VPLDDRHSTWLTFIKGQQGLSVRFTISPGRNEENTDQTTVEYMADRLQFAPPVAEDAAEVMFDEHRPYLSLISGGTPQSL REFYARTLAASDWEPLPEADIATKWPNAKLDPKPANGDIAYFMRGNVRPLMLVLRTTGQGRTQVELKAPAFAELQSLEAD NDIFGLPVPKPRKNAGGTNGGTGREIHAQVMASLEAVLSFYRGALSARGWKEDARAMVGPEDAEVNFTFPEGTASLKLAR QYGLTTVSLIEKITKPKPQSVAGSASVNDMLQQAQQMMRDAEAQAGVPIQPPAAARGADDAVQPLQPLAGGNAPIPLPET AQDIDFDGEDGTLQFASASSVKSIAEFFRSALQRSGWRAKPSVINNANMAQLQFAKGNKDLSITVMKMGPSTNVNARGSG LQVAAAKPDAPAAGNRSAGSAPTPAPSADDLIVEESAGLPVPKRHTMSEGTQTPFRRELNANVPLDLSVVLEFYRRELGT RNWKEDAKSVVVAADRATVRFASPDGPAALKLGRKGNETTVNLSVKNPEAARKAGILPPAGKAHVMFGNIMPEDASLTFN NRTIKVAANAGTKGPDGPALDLAPGKYKYSIKTGGKIDADEVEIRSDETWGLMIGPGGVLALQAY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 100908; Mature: 100777
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGEMVSFSRMRGGHRRHLLAFCALVAVSAAGCLPSRAQAPDRVDIGDFDASKLPRLPGA CCCCCEEHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCC KDVFASPFTTIFVSPQAIGPTADAVEKALVALGWQKYAAPNTASAENPTMRTLTLKKGRQ HHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHCHHHHCCCCCCCCCCCCEEEEEHHCCCC ALNVFITVAPAQNNAISVQYSAVPLKVDLPFTADAADIEYSPDRPSLSLVSGEPVEKLLD EEEEEEEEEECCCCEEEEEEEEEEEEEECCCCCCCCCCEECCCCCCEEEECCCCHHHHHH FYRQELASRGWVLWSAKANGKQAPGGPSGTLHERGGFAYFVSDQEPKATLALVLQKTDAG HHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEEECCCC KVRVEIKPQPISVLANERQVYLGRDNVAPPVAVSDLPRLPGARDTGKSTAERVSYSVPGN EEEEEECCCCEEEEECCCEEEEECCCCCCCCCHHCCCCCCCCCCCCCHHHHHEEEECCCC VPATTAAIKALLAAQGWTFYLVPLDDRHSTWLTFIKGQQGLSVRFTISPGRNEENTDQTT CCHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCCCCCHHHH VEYMADRLQFAPPVAEDAAEVMFDEHRPYLSLISGGTPQSLREFYARTLAASDWEPLPEA HHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCC DIATKWPNAKLDPKPANGDIAYFMRGNVRPLMLVLRTTGQGRTQVELKAPAFAELQSLEA CCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCEEEEECCCCHHHHHHCCC DNDIFGLPVPKPRKNAGGTNGGTGREIHAQVMASLEAVLSFYRGALSARGWKEDARAMVG CCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCC PEDAEVNFTFPEGTASLKLARQYGLTTVSLIEKITKPKPQSVAGSASVNDMLQQAQQMMR CCCCEEEEECCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH DAEAQAGVPIQPPAAARGADDAVQPLQPLAGGNAPIPLPETAQDIDFDGEDGTLQFASAS HHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECHH SVKSIAEFFRSALQRSGWRAKPSVINNANMAQLQFAKGNKDLSITVMKMGPSTNVNARGS HHHHHHHHHHHHHHHCCCCCCCCEECCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCC GLQVAAAKPDAPAAGNRSAGSAPTPAPSADDLIVEESAGLPVPKRHTMSEGTQTPFRREL CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHC NANVPLDLSVVLEFYRRELGTRNWKEDAKSVVVAADRATVRFASPDGPAALKLGRKGNET CCCCCCHHHHHHHHHHHHHCCCCHHHHCCEEEEEECCEEEEEECCCCCEEEEECCCCCCE TVNLSVKNPEAARKAGILPPAGKAHVMFGNIMPEDASLTFNNRTIKVAANAGTKGPDGPA EEEEEECCCHHHHHCCCCCCCCCEEEEECCCCCCCCEEEECCEEEEEEECCCCCCCCCCE LDLAPGKYKYSIKTGGKIDADEVEIRSDETWGLMIGPGGVLALQAY EECCCCCEEEEECCCCCCCCCCEEEECCCCEEEEECCCCEEEEEEC >Mature Secondary Structure TGEMVSFSRMRGGHRRHLLAFCALVAVSAAGCLPSRAQAPDRVDIGDFDASKLPRLPGA CCCCEEHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCC KDVFASPFTTIFVSPQAIGPTADAVEKALVALGWQKYAAPNTASAENPTMRTLTLKKGRQ HHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHCHHHHCCCCCCCCCCCCEEEEEHHCCCC ALNVFITVAPAQNNAISVQYSAVPLKVDLPFTADAADIEYSPDRPSLSLVSGEPVEKLLD EEEEEEEEEECCCCEEEEEEEEEEEEEECCCCCCCCCCEECCCCCCEEEECCCCHHHHHH FYRQELASRGWVLWSAKANGKQAPGGPSGTLHERGGFAYFVSDQEPKATLALVLQKTDAG HHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEEECCCC KVRVEIKPQPISVLANERQVYLGRDNVAPPVAVSDLPRLPGARDTGKSTAERVSYSVPGN EEEEEECCCCEEEEECCCEEEEECCCCCCCCCHHCCCCCCCCCCCCCHHHHHEEEECCCC VPATTAAIKALLAAQGWTFYLVPLDDRHSTWLTFIKGQQGLSVRFTISPGRNEENTDQTT CCHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCCCCCHHHH VEYMADRLQFAPPVAEDAAEVMFDEHRPYLSLISGGTPQSLREFYARTLAASDWEPLPEA HHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCC DIATKWPNAKLDPKPANGDIAYFMRGNVRPLMLVLRTTGQGRTQVELKAPAFAELQSLEA CCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCEEEEECCCCHHHHHHCCC DNDIFGLPVPKPRKNAGGTNGGTGREIHAQVMASLEAVLSFYRGALSARGWKEDARAMVG CCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCC PEDAEVNFTFPEGTASLKLARQYGLTTVSLIEKITKPKPQSVAGSASVNDMLQQAQQMMR CCCCEEEEECCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH DAEAQAGVPIQPPAAARGADDAVQPLQPLAGGNAPIPLPETAQDIDFDGEDGTLQFASAS HHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECHH SVKSIAEFFRSALQRSGWRAKPSVINNANMAQLQFAKGNKDLSITVMKMGPSTNVNARGS HHHHHHHHHHHHHHHCCCCCCCCEECCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCC GLQVAAAKPDAPAAGNRSAGSAPTPAPSADDLIVEESAGLPVPKRHTMSEGTQTPFRREL CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHC NANVPLDLSVVLEFYRRELGTRNWKEDAKSVVVAADRATVRFASPDGPAALKLGRKGNET CCCCCCHHHHHHHHHHHHHCCCCHHHHCCEEEEEECCEEEEEECCCCCEEEEECCCCCCE TVNLSVKNPEAARKAGILPPAGKAHVMFGNIMPEDASLTFNNRTIKVAANAGTKGPDGPA EEEEEECCCHHHHHCCCCCCCCCEEEEECCCCCCCCEEEECCEEEEEEECCCCCCCCCCE LDLAPGKYKYSIKTGGKIDADEVEIRSDETWGLMIGPGGVLALQAY EECCCCCEEEEECCCCCCCCCCEEEECCCCEEEEECCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA