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The map label for this gene is cycA [H]

Identifier: 154246610

GI number: 154246610

Start: 2960787

End: 2961233

Strand: Reverse

Name: cycA [H]

Synonym: Xaut_2670

Alternate gene names: 154246610

Gene position: 2961233-2960787 (Counterclockwise)

Preceding gene: 154246611

Following gene: 154246603

Centisome position: 55.78

GC content: 57.27

Gene sequence:

>447_bases
ATGCTGTCCTGCGCGGCTTGCCGCGCAAGGCAACATCGAGGACGCTTAAATAAGGATGCTTTTGTGAAAACGATCTTGCT
CGTGCTTGCTGTGGCCGGTGTCGCGTCCGATGCTTACGCCCAGGATGCGGCCTCAGGTGAGAAAGTCTTCGCGCAATGCC
GCGCGTGTCATCAAGTTGGACCGAATGCCAAGAACGCCGTCGGTCCTGTGCTCAACGGCCTCATGGGTCGGAAGGCGGGG
ACTTACGAAGGGTACACCTACAGCCAGGCTATGAAGGATTCAGGGATCACCTGGACCGACGACAGCTTCTCTACCTACAT
CATGAACCCGAGGTCAAAAGTTCCTGGCACGAAGATGGCGTTTGCAGGCGTGAAGGATCCTGGCAAGGTGGCTGACCTGT
TAGCCTACTTGAAGCGGTTCGACGCGAACGGCAACAAGGTGCCCTGA

Upstream 100 bases:

>100_bases
GGGAAGCGGAGGTTCACAAGATGATCAAGGTCTACAAGGCTCCGATCGAAGAAAACGACGCCAAAGCCATTATAGAATAT
CTCTCAAATACATATTGAGA

Downstream 100 bases:

>100_bases
TGCTCTCGCCGCGTGGGGCTTGTTGGCTCGACGGCGCCGCAACAAGAGAAAAAAGTCCGAGGCGTCTCTATCCACCTTGA
TCCAATGCGAAGAGTCTCAA

Product: cytochrome c class I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MLSCAACRARQHRGRLNKDAFVKTILLVLAVAGVASDAYAQDAASGEKVFAQCRACHQVGPNAKNAVGPVLNGLMGRKAG
TYEGYTYSQAMKDSGITWTDDSFSTYIMNPRSKVPGTKMAFAGVKDPGKVADLLAYLKRFDANGNKVP

Sequences:

>Translated_148_residues
MLSCAACRARQHRGRLNKDAFVKTILLVLAVAGVASDAYAQDAASGEKVFAQCRACHQVGPNAKNAVGPVLNGLMGRKAG
TYEGYTYSQAMKDSGITWTDDSFSTYIMNPRSKVPGTKMAFAGVKDPGKVADLLAYLKRFDANGNKVP
>Mature_148_residues
MLSCAACRARQHRGRLNKDAFVKTILLVLAVAGVASDAYAQDAASGEKVFAQCRACHQVGPNAKNAVGPVLNGLMGRKAG
TYEGYTYSQAMKDSGITWTDDSFSTYIMNPRSKVPGTKMAFAGVKDPGKVADLLAYLKRFDANGNKVP

Specific function: Cytochrome c2 is found mainly in purple, non-sulfur, photosynthetic bacteria where it functions as the electron donor to the oxidized bacteriochlorophyll in the photophosphorylation pathway. However, it may also have a role in the respiratory chain and is

COG id: COG3474

COG function: function code C; Cytochrome c2

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c family [H]

Homologues:

Organism=Homo sapiens, GI11128019, Length=99, Percent_Identity=45.4545454545455, Blast_Score=100, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI17539604, Length=104, Percent_Identity=43.2692307692308, Blast_Score=94, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17566554, Length=98, Percent_Identity=38.7755102040816, Blast_Score=84, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6320796, Length=98, Percent_Identity=39.7959183673469, Blast_Score=89, Evalue=3e-19,
Organism=Saccharomyces cerevisiae, GI6322508, Length=101, Percent_Identity=39.6039603960396, Blast_Score=86, Evalue=3e-18,
Organism=Drosophila melanogaster, GI17137228, Length=100, Percent_Identity=49, Blast_Score=104, Evalue=3e-23,
Organism=Drosophila melanogaster, GI17137204, Length=98, Percent_Identity=45.9183673469388, Blast_Score=96, Evalue=9e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002327
- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 15793; Mature: 15793

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSCAACRARQHRGRLNKDAFVKTILLVLAVAGVASDAYAQDAASGEKVFAQCRACHQVG
CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
PNAKNAVGPVLNGLMGRKAGTYEGYTYSQAMKDSGITWTDDSFSTYIMNPRSKVPGTKMA
CCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCEECCCCCEEEEECCCCCCCCCCEE
FAGVKDPGKVADLLAYLKRFDANGNKVP
ECCCCCCHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLSCAACRARQHRGRLNKDAFVKTILLVLAVAGVASDAYAQDAASGEKVFAQCRACHQVG
CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
PNAKNAVGPVLNGLMGRKAGTYEGYTYSQAMKDSGITWTDDSFSTYIMNPRSKVPGTKMA
CCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCEECCCCCEEEEECCCCCCCCCCEE
FAGVKDPGKVADLLAYLKRFDANGNKVP
ECCCCCCHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1697576; 174109; 7674304 [H]