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The map label for this gene is 154246596

Identifier: 154246596

GI number: 154246596

Start: 2949847

End: 2950155

Strand: Reverse

Name: 154246596

Synonym: Xaut_2656

Alternate gene names: NA

Gene position: 2950155-2949847 (Counterclockwise)

Preceding gene: 154246598

Following gene: 154246593

Centisome position: 55.57

GC content: 63.43

Gene sequence:

>309_bases
GTGAGCCAGCGGCGGGCGTGTGAAGTCCTTGCGGTGGACCGCTCGAGCGTGCGCTACAGGTCCGTTCGCTCTGACGACGC
CAGTCTGCGGGAAGCGATGAAGATGATGGCGTCGGAACGCCGCCGCTTCGGCTACAGGCGCATCCATGTGATGCTCCAGC
GCCAGGGTATCTCGATGAACCTCAAGAAGCTCAGACGGCTCTATCGTGGGCTTTGGCGCCGCGACTTAATCGCGGAAGCG
GACGCCGCGCTGATCAAGGCGAGGACGCTTGGCCCATCGGTTTCGCGCATTTTGCCGGCCCAGTTGTAG

Upstream 100 bases:

>100_bases
CTCATCAGAATGAGGCGGGGAGACGGGGCGGACCATCCCATTAATGCTGACGCCCGCCGCGAAGCGGGAGGCCGTGGCGC
ATGCCTGCACGGAGCACGGT

Downstream 100 bases:

>100_bases
CGCACCTGGTGCTCGCGGCGGGGTCTGAAGGAACCGCCGCCCTGGGCAGCCGTTCTGTCGCTACGATCAGCTTCTGGAAC
TGCGCGACGACCTGATCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: Integrase Catalytic Subunit

Number of amino acids: Translated: 102; Mature: 101

Protein sequence:

>102_residues
MSQRRACEVLAVDRSSVRYRSVRSDDASLREAMKMMASERRRFGYRRIHVMLQRQGISMNLKKLRRLYRGLWRRDLIAEA
DAALIKARTLGPSVSRILPAQL

Sequences:

>Translated_102_residues
MSQRRACEVLAVDRSSVRYRSVRSDDASLREAMKMMASERRRFGYRRIHVMLQRQGISMNLKKLRRLYRGLWRRDLIAEA
DAALIKARTLGPSVSRILPAQL
>Mature_101_residues
SQRRACEVLAVDRSSVRYRSVRSDDASLREAMKMMASERRRFGYRRIHVMLQRQGISMNLKKLRRLYRGLWRRDLIAEAD
AALIKARTLGPSVSRILPAQL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11918; Mature: 11787

Theoretical pI: Translated: 12.15; Mature: 12.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQRRACEVLAVDRSSVRYRSVRSDDASLREAMKMMASERRRFGYRRIHVMLQRQGISMN
CCCCHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LKKLRRLYRGLWRRDLIAEADAALIKARTLGPSVSRILPAQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCC
>Mature Secondary Structure 
SQRRACEVLAVDRSSVRYRSVRSDDASLREAMKMMASERRRFGYRRIHVMLQRQGISMN
CCCHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LKKLRRLYRGLWRRDLIAEADAALIKARTLGPSVSRILPAQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA