Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
---|---|
Accession | NC_009720 |
Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is yegV [C]
Identifier: 154246506
GI number: 154246506
Start: 2857420
End: 2858421
Strand: Reverse
Name: yegV [C]
Synonym: Xaut_2565
Alternate gene names: 154246506
Gene position: 2858421-2857420 (Counterclockwise)
Preceding gene: 154246509
Following gene: 154246505
Centisome position: 53.84
GC content: 71.66
Gene sequence:
>1002_bases GTGACCTCAAGCGCCCTCGACGTTCTCGCCATCGGCAACGCCATCGTCGATGTCCTCTCCCGCGCCGAGGAGGATGTCCT GGCCCGCCACGGCATGGTCAAGGGCGGCATGGCCCTCATCGACGAGGCGCGGGCGGAACAGGTCTACGCCGCCATGGGGC CGGGCACCGAAGCCTCAGGCGGCTCGGCGGCCAACACGGCGGCGGGCATCGCCTCCCTCGGCGGACGCGCCGGCTTCGTC GGCCGGGTGAAGGCGGACACGCTGGGCACCGTCTTTGGCCACGATATCCGCGCGGCCGGGGTCGCCTATGCCACGACGGC CGCCACCGACGGCCCCGCCACCGCGCGCTGCCTGATCCTGGTGACGCCGGACGGCGAGCGCACCATGAACACCTATCTCG GTGCCGCCCAGCACCTCACCACCGCCGACATCCACGCGGGCGAGGTGGAAAGCGCCGCCGTCACCTATCTGGAAGGCTAT CTGTGGGACCCGCCGCCCGCCAAGAACGCCTTCCTCGCCGCCGCCCAGATCGCCCACGGCGCCGGGCGCAAGGTGGCCCT CACCCTTTCCGACGCCTTCTGCGTGGACCGCTATCGCGGTGAGTTCGTAGACCTGATCCGGGGCGGCACGGTCGACCTCG TCTTCTGCAACGAGGGCGAGCTGAAGTCGCTCTACGAGACCGCCGATTTCGATGCCGCCATCGTCGCCCTGCGCCGTGAC GCGAAGGAAGCGGTGGTGACGCGCTCGGAGAAGGGCGCCTCCTTCGTCACCTCCGGCGCGGTGGTCAGCGTGCCGGCCCA TCCGGTGGCAAAGGTGGTGGACACTACCGGCGCCGGCGACCTGTTCGCCGCCGGCTTCCTCACCGGCTATACGCGCGGGC TGGACCCGGCCACCTCGCTTCGCCTCGGCGCGCTGGCGGCGGGGGAGATCATCGGCCAGATGGGCGCACGGCCCCAGCGT CCCCTCCTCGACCTCGCCCGCGAGGCCGGCCTCCTGTCGTGA
Upstream 100 bases:
>100_bases AGCCTAGCCGCCAGGGACGAACACAGGGTTAAGGCGAAGATTGCGCCGGCCCCTCGCCCAATGCTACGGCTCCGCCGATT CTTTGCGGAGATTGCCCCTC
Downstream 100 bases:
>100_bases GCGAATTGCCGAGCGATTTGCCGGCCGCGCCCGACGCGACGGATGCGGCCGGCCGGGCGCTCGCCGCCATCGACAGCCGC GCCCCGCTCCTCATGGTGCT
Product: ribokinase-like domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MTSSALDVLAIGNAIVDVLSRAEEDVLARHGMVKGGMALIDEARAEQVYAAMGPGTEASGGSAANTAAGIASLGGRAGFV GRVKADTLGTVFGHDIRAAGVAYATTAATDGPATARCLILVTPDGERTMNTYLGAAQHLTTADIHAGEVESAAVTYLEGY LWDPPPAKNAFLAAAQIAHGAGRKVALTLSDAFCVDRYRGEFVDLIRGGTVDLVFCNEGELKSLYETADFDAAIVALRRD AKEAVVTRSEKGASFVTSGAVVSVPAHPVAKVVDTTGAGDLFAAGFLTGYTRGLDPATSLRLGALAAGEIIGQMGARPQR PLLDLAREAGLLS
Sequences:
>Translated_333_residues MTSSALDVLAIGNAIVDVLSRAEEDVLARHGMVKGGMALIDEARAEQVYAAMGPGTEASGGSAANTAAGIASLGGRAGFV GRVKADTLGTVFGHDIRAAGVAYATTAATDGPATARCLILVTPDGERTMNTYLGAAQHLTTADIHAGEVESAAVTYLEGY LWDPPPAKNAFLAAAQIAHGAGRKVALTLSDAFCVDRYRGEFVDLIRGGTVDLVFCNEGELKSLYETADFDAAIVALRRD AKEAVVTRSEKGASFVTSGAVVSVPAHPVAKVVDTTGAGDLFAAGFLTGYTRGLDPATSLRLGALAAGEIIGQMGARPQR PLLDLAREAGLLS >Mature_332_residues TSSALDVLAIGNAIVDVLSRAEEDVLARHGMVKGGMALIDEARAEQVYAAMGPGTEASGGSAANTAAGIASLGGRAGFVG RVKADTLGTVFGHDIRAAGVAYATTAATDGPATARCLILVTPDGERTMNTYLGAAQHLTTADIHAGEVESAAVTYLEGYL WDPPPAKNAFLAAAQIAHGAGRKVALTLSDAFCVDRYRGEFVDLIRGGTVDLVFCNEGELKSLYETADFDAAIVALRRDA KEAVVTRSEKGASFVTSGAVVSVPAHPVAKVVDTTGAGDLFAAGFLTGYTRGLDPATSLRLGALAAGEIIGQMGARPQRP LLDLAREAGLLS
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
Organism=Caenorhabditis elegans, GI17541820, Length=332, Percent_Identity=23.7951807228916, Blast_Score=69, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6322565, Length=336, Percent_Identity=26.7857142857143, Blast_Score=88, Evalue=2e-18, Organism=Drosophila melanogaster, GI21355521, Length=339, Percent_Identity=26.8436578171091, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI21356339, Length=342, Percent_Identity=24.8538011695906, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24663633, Length=333, Percent_Identity=24.6246246246246, Blast_Score=77, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: NA
Molecular weight: Translated: 34091; Mature: 33960
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSALDVLAIGNAIVDVLSRAEEDVLARHGMVKGGMALIDEARAEQVYAAMGPGTEASG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC GSAANTAAGIASLGGRAGFVGRVKADTLGTVFGHDIRAAGVAYATTAATDGPATARCLIL CCCCHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCHHHCCEEEEEECCCCCCCCEEEEEE VTPDGERTMNTYLGAAQHLTTADIHAGEVESAAVTYLEGYLWDPPPAKNAFLAAAQIAHG ECCCCCHHHHHHHHHHHHCEECCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCC AGRKVALTLSDAFCVDRYRGEFVDLIRGGTVDLVFCNEGELKSLYETADFDAAIVALRRD CCCEEEEEECCHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHCCCHHHHHHHHHH AKEAVVTRSEKGASFVTSGAVVSVPAHPVAKVVDTTGAGDLFAAGFLTGYTRGLDPATSL HHHHHHCCCCCCCEEEECCEEEEECCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHH RLGALAAGEIIGQMGARPQRPLLDLAREAGLLS HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCC >Mature Secondary Structure TSSALDVLAIGNAIVDVLSRAEEDVLARHGMVKGGMALIDEARAEQVYAAMGPGTEASG CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC GSAANTAAGIASLGGRAGFVGRVKADTLGTVFGHDIRAAGVAYATTAATDGPATARCLIL CCCCHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCHHHCCEEEEEECCCCCCCCEEEEEE VTPDGERTMNTYLGAAQHLTTADIHAGEVESAAVTYLEGYLWDPPPAKNAFLAAAQIAHG ECCCCCHHHHHHHHHHHHCEECCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCC AGRKVALTLSDAFCVDRYRGEFVDLIRGGTVDLVFCNEGELKSLYETADFDAAIVALRRD CCCEEEEEECCHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHCCCHHHHHHHHHH AKEAVVTRSEKGASFVTSGAVVSVPAHPVAKVVDTTGAGDLFAAGFLTGYTRGLDPATSL HHHHHHCCCCCCCEEEECCEEEEECCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHH RLGALAAGEIIGQMGARPQRPLLDLAREAGLLS HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]