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The map label for this gene is 154246505

Identifier: 154246505

GI number: 154246505

Start: 2856119

End: 2857414

Strand: Reverse

Name: 154246505

Synonym: Xaut_2564

Alternate gene names: NA

Gene position: 2857414-2856119 (Counterclockwise)

Preceding gene: 154246506

Following gene: 154246504

Centisome position: 53.82

GC content: 71.91

Gene sequence:

>1296_bases
TTGCCGAGCGATTTGCCGGCCGCGCCCGACGCGACGGATGCGGCCGGCCGGGCGCTCGCCGCCATCGACAGCCGCGCCCC
GCTCCTCATGGTGCTGGGCGGCGCCGGCACCGGCAAGACCACCTTCCTGCACGCCTTGCGCAAGACCCCGCGCGGGCGGC
AGGTGTTCCTCGCCCCCACCGGCGTCGCGGCGCTCCAGGCCGGCGGGCAGACCATCCATTCCTTCTTCGGCATCCCGCCG
CGCCTGCTCAACCCCGACGAGGTGAAGCCGCGGGTGCAGGTGCGCCGCCTGCTCAAGAAACTCGACCGGGTGGTGATCGA
CGAAGTGTCCATGGTCCGCGCCGACCTCATGGACGCCATCGACATTTCGCTGCGCATCGCCCGCGACACCTCCGAGCCGT
TCGGCGGGGTGCAGATGGTGCTGGTGGGCGATTTCCTGCAACTGCCCCCGGTGGTGCCCATGGCCGAGCAGGAGATGCTG
GGCCGGATGGGCTATGAGGGCCCCTTCGCCTTCAATGCCAAGGCCCTGGCCGACCGCGAGCCGGTCGGCGTGCCGTTCAC
CCATGTGCACAGGCAGACCGACCGCGCCTTTATCGCCATGCTGGACGCCATCCGGCGCGGGCGCGGCGCGCGGGAGGCGG
CGGAGGCGCTGAACGAAGCCTGCGTGCGACCCCATCGCGACGGCGCCCTGCCGGTGCTGCTCACCCCCACCAACGCCCGC
GCCGACGCCTACAACGCCCGTGGCCTTGCCACCCTGTCCGACGCCGGCCGCGAATTCTCCGGCCTTTTGAAGGGCGAGTT
CGGGCTGGAGGGCGACCGCCTGCCGGTGGCGGAGCGGCTGGTGCTGAAGCGCGGCGCGCGGGTGATGGCCCTGCGCAACG
ATCCGGCCCGGCGCTGGGTCAACGGCTCAGTGGGCACGGTGGTGGGGCTGGGCGAGACCTCCGCCATGGTGAAGCTGGAT
GCCGGGCCGGTGGTGGAGATCGAATCCTTCACCTGGGAGCGCATCCGCTACGGCTGGGACGAGCCGGGGGGCCGCATCGA
GGCGCAGGTGGTGGGCACCTACACCCAGCTGCCGCTGGCCCCCGCCTGGGCGCTGACCATGCACAAGGCGCAGGGCCTGA
CGCTGGAAGACGTGCGCATCGATTTCGGCGACGGCGCCTTCGCCCCGGGCCAGGCCTATGTGGCCCTCTCGCGGGCGCGG
TCTCTGGAAGGGCTCTCGCTGGTGCGACCGATCCGCGGGCAGGATGTGCGCGTGGACCGCCGCGTGGTGGGGTTTATGGA
GCGGTTTGAGGGGTGA

Upstream 100 bases:

>100_bases
GCGCGCTGGCGGCGGGGGAGATCATCGGCCAGATGGGCGCACGGCCCCAGCGTCCCCTCCTCGACCTCGCCCGCGAGGCC
GGCCTCCTGTCGTGAGCGAA

Downstream 100 bases:

>100_bases
GGAGGGCAGAAATGCCCGGAGGGAGGTCGCCAGTGAGTACATTTTCCGACACAAAGGTGATCGGACGGGCTTATCTGATT
AGTTTCCTTTGGGTCCTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: Helicase; TPR Domain Protein; TPR Domain-Containing Protein; ATPase; Exonuclease V Subunit Alpha; 5-3' DNA Helicase; Helicase-Related Protein; Aaa ATPase; Glycosysltransferase; Hrdc Domain Protein; Helicase-Family Protein; Helicase Protein; HRDC Domain Protein; RecD-Like Exodeoxyribonuclease V Alpha Chain; RRM3/PIF1 Helicase-Like Protein; ATP-Dependent ExoDNAse Alpha Subunit; DNA Helicase AAA ATPase; DNA Helicase/AAA ATPase; Helicase RecD/TraA Family

Number of amino acids: Translated: 431; Mature: 430

Protein sequence:

>431_residues
MPSDLPAAPDATDAAGRALAAIDSRAPLLMVLGGAGTGKTTFLHALRKTPRGRQVFLAPTGVAALQAGGQTIHSFFGIPP
RLLNPDEVKPRVQVRRLLKKLDRVVIDEVSMVRADLMDAIDISLRIARDTSEPFGGVQMVLVGDFLQLPPVVPMAEQEML
GRMGYEGPFAFNAKALADREPVGVPFTHVHRQTDRAFIAMLDAIRRGRGAREAAEALNEACVRPHRDGALPVLLTPTNAR
ADAYNARGLATLSDAGREFSGLLKGEFGLEGDRLPVAERLVLKRGARVMALRNDPARRWVNGSVGTVVGLGETSAMVKLD
AGPVVEIESFTWERIRYGWDEPGGRIEAQVVGTYTQLPLAPAWALTMHKAQGLTLEDVRIDFGDGAFAPGQAYVALSRAR
SLEGLSLVRPIRGQDVRVDRRVVGFMERFEG

Sequences:

>Translated_431_residues
MPSDLPAAPDATDAAGRALAAIDSRAPLLMVLGGAGTGKTTFLHALRKTPRGRQVFLAPTGVAALQAGGQTIHSFFGIPP
RLLNPDEVKPRVQVRRLLKKLDRVVIDEVSMVRADLMDAIDISLRIARDTSEPFGGVQMVLVGDFLQLPPVVPMAEQEML
GRMGYEGPFAFNAKALADREPVGVPFTHVHRQTDRAFIAMLDAIRRGRGAREAAEALNEACVRPHRDGALPVLLTPTNAR
ADAYNARGLATLSDAGREFSGLLKGEFGLEGDRLPVAERLVLKRGARVMALRNDPARRWVNGSVGTVVGLGETSAMVKLD
AGPVVEIESFTWERIRYGWDEPGGRIEAQVVGTYTQLPLAPAWALTMHKAQGLTLEDVRIDFGDGAFAPGQAYVALSRAR
SLEGLSLVRPIRGQDVRVDRRVVGFMERFEG
>Mature_430_residues
PSDLPAAPDATDAAGRALAAIDSRAPLLMVLGGAGTGKTTFLHALRKTPRGRQVFLAPTGVAALQAGGQTIHSFFGIPPR
LLNPDEVKPRVQVRRLLKKLDRVVIDEVSMVRADLMDAIDISLRIARDTSEPFGGVQMVLVGDFLQLPPVVPMAEQEMLG
RMGYEGPFAFNAKALADREPVGVPFTHVHRQTDRAFIAMLDAIRRGRGAREAAEALNEACVRPHRDGALPVLLTPTNARA
DAYNARGLATLSDAGREFSGLLKGEFGLEGDRLPVAERLVLKRGARVMALRNDPARRWVNGSVGTVVGLGETSAMVKLDA
GPVVEIESFTWERIRYGWDEPGGRIEAQVVGTYTQLPLAPAWALTMHKAQGLTLEDVRIDFGDGAFAPGQAYVALSRARS
LEGLSLVRPIRGQDVRVDRRVVGFMERFEG

Specific function: Unknown

COG id: COG0507

COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI82546872, Length=437, Percent_Identity=36.3844393592677, Blast_Score=194, Evalue=1e-49,
Organism=Caenorhabditis elegans, GI25143421, Length=420, Percent_Identity=31.4285714285714, Blast_Score=191, Evalue=6e-49,
Organism=Saccharomyces cerevisiae, GI6321820, Length=316, Percent_Identity=30.0632911392405, Blast_Score=122, Evalue=1e-28,
Organism=Saccharomyces cerevisiae, GI6323579, Length=302, Percent_Identity=33.4437086092715, Blast_Score=112, Evalue=1e-25,
Organism=Drosophila melanogaster, GI19920652, Length=416, Percent_Identity=30.2884615384615, Blast_Score=143, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46658; Mature: 46527

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSDLPAAPDATDAAGRALAAIDSRAPLLMVLGGAGTGKTTFLHALRKTPRGRQVFLAPT
CCCCCCCCCCCCCHHCCEEEECCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCEEEEECC
GVAALQAGGQTIHSFFGIPPRLLNPDEVKPRVQVRRLLKKLDRVVIDEVSMVRADLMDAI
CHHHHHCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DISLRIARDTSEPFGGVQMVLVGDFLQLPPVVPMAEQEMLGRMGYEGPFAFNAKALADRE
CEEEEEEECCCCCCCCEEEEEEHHHHHCCCCCCCHHHHHHHHCCCCCCCEECCHHHCCCC
PVGVPFTHVHRQTDRAFIAMLDAIRRGRGAREAAEALNEACVRPHRDGALPVLLTPTNAR
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCC
ADAYNARGLATLSDAGREFSGLLKGEFGLEGDRLPVAERLVLKRGARVMALRNDPARRWV
CCCCCCCCCEEHHHCCHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCHHHHC
NGSVGTVVGLGETSAMVKLDAGPVVEIESFTWERIRYGWDEPGGRIEAQVVGTYTQLPLA
CCCCCEEEECCCCCEEEEECCCCEEEECCCCHHHHHCCCCCCCCEEEEEEEEEEECCCCC
PAWALTMHKAQGLTLEDVRIDFGDGAFAPGQAYVALSRARSLEGLSLVRPIRGQDVRVDR
CHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCHHHHCCCCCCCEEHHH
RVVGFMERFEG
HHHHHHHHHCC
>Mature Secondary Structure 
PSDLPAAPDATDAAGRALAAIDSRAPLLMVLGGAGTGKTTFLHALRKTPRGRQVFLAPT
CCCCCCCCCCCCHHCCEEEECCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCEEEEECC
GVAALQAGGQTIHSFFGIPPRLLNPDEVKPRVQVRRLLKKLDRVVIDEVSMVRADLMDAI
CHHHHHCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DISLRIARDTSEPFGGVQMVLVGDFLQLPPVVPMAEQEMLGRMGYEGPFAFNAKALADRE
CEEEEEEECCCCCCCCEEEEEEHHHHHCCCCCCCHHHHHHHHCCCCCCCEECCHHHCCCC
PVGVPFTHVHRQTDRAFIAMLDAIRRGRGAREAAEALNEACVRPHRDGALPVLLTPTNAR
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCC
ADAYNARGLATLSDAGREFSGLLKGEFGLEGDRLPVAERLVLKRGARVMALRNDPARRWV
CCCCCCCCCEEHHHCCHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCHHHHC
NGSVGTVVGLGETSAMVKLDAGPVVEIESFTWERIRYGWDEPGGRIEAQVVGTYTQLPLA
CCCCCEEEECCCCCEEEEECCCCEEEECCCCHHHHHCCCCCCCCEEEEEEEEEEECCCCC
PAWALTMHKAQGLTLEDVRIDFGDGAFAPGQAYVALSRARSLEGLSLVRPIRGQDVRVDR
CHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCHHHHCCCCCCCEEHHH
RVVGFMERFEG
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA