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The map label for this gene is cbpA [C]

Identifier: 154246421

GI number: 154246421

Start: 2771152

End: 2772105

Strand: Direct

Name: cbpA [C]

Synonym: Xaut_2480

Alternate gene names: 154246421

Gene position: 2771152-2772105 (Clockwise)

Preceding gene: 154246420

Following gene: 154246422

Centisome position: 52.2

GC content: 69.29

Gene sequence:

>954_bases
ATGCGTGATCCTTACGACGTCCTCGGCGTCTCCAAGACCGCCGACGAGGCCGAGATCAAGCGCGCCTATCGCAAGCTTGC
GAAGAAGCTGCATCCCGACGCCAATGCGTCCGATCCCAAGGCCCAGGACCGCTTTGCGGAGCTGAATACCGCGCACGAAA
TCCTTGAGGACAAGGAGAAGCGCGCCCAGTACGACCGCGGCGAGATCGACGCCGAGGGCAAGCCGAAAGCCCCCGAATTC
ACCGGATTTCGCGGTGGCGGCCCGCGGCGCGGGCCCGGCGGCTTCTCCGGCTACGACGGCGACACGATTTTCGAGAGCTT
CTCCTTCGGTCCCGAGGGGGCACGCCGCTCGTCCGGGCGCGGCGGCGGTGGCGGCTTCGAGGACATCGGCGACATTTTCG
GCTTCGGCCGCCAGCGCCGCTCCGCCGGCGGTGGCTTTGCGCCCCAGCCCGGCGCGGACATGGAAATAACGCTCCCGGTC
TCCTTCGAGGAGGCGGCCGAAGGGGCCTCCAAGCGCGTCGGCCTGCCCAACGGCAAGCAGATCGACATCAAGATCGCCGC
CGGCACCCGCGAGGGGCATCGCATGCGCCTGAAGGGGCAGGGCGAGCCCAGCGCCATGGGCGGCCCGCCGGGCGATGCCT
ATGTCACCATCTCCTATGCGCCCCATCCGATCTTCGAGCGGGACGGCGACGACCTGCGCCAGAACGTGGACGTGGCACTC
GCCGATGCGGTGCTGGGGGCCAAGGTTCGCGTGCCCACCCTCAAGGGGGCGGTGGAGCTTGCCATTCCCGCCTGGACCTC
CGGCGGGCGCACCTTCCGCCTGCGCGGCAAGGGCCTGCCCACGGCGAGCGGAGGCCACGGCGATCTGCTGGTGCGCACCA
ACCTCGTCCTGCCCAAGGACAAGGACGGCGACCTGGAAGCCCTCATGAAGAAGCTGCGCGAGCAGGCGGACTGA

Upstream 100 bases:

>100_bases
TGAGCCGCTGGCCAGCGCGGCCGTTGCATTTTTCGCGCCGCGAACCACATCCTGAGATGCGGCTGGCCGCCTGAGTGCCG
GCCGGCGAGGTGATTGACCC

Downstream 100 bases:

>100_bases
GCACGGAGGCAGATGCGTTATCGGCCGCCAGTGCCGGGGTGAGCACCGGCCTGCGCTGTGCAGGCCCTACCATATTTGGG
GGATGCCCGGCCGCTGCGCC

Product: chaperone DnaJ domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MRDPYDVLGVSKTADEAEIKRAYRKLAKKLHPDANASDPKAQDRFAELNTAHEILEDKEKRAQYDRGEIDAEGKPKAPEF
TGFRGGGPRRGPGGFSGYDGDTIFESFSFGPEGARRSSGRGGGGGFEDIGDIFGFGRQRRSAGGGFAPQPGADMEITLPV
SFEEAAEGASKRVGLPNGKQIDIKIAAGTREGHRMRLKGQGEPSAMGGPPGDAYVTISYAPHPIFERDGDDLRQNVDVAL
ADAVLGAKVRVPTLKGAVELAIPAWTSGGRTFRLRGKGLPTASGGHGDLLVRTNLVLPKDKDGDLEALMKKLREQAD

Sequences:

>Translated_317_residues
MRDPYDVLGVSKTADEAEIKRAYRKLAKKLHPDANASDPKAQDRFAELNTAHEILEDKEKRAQYDRGEIDAEGKPKAPEF
TGFRGGGPRRGPGGFSGYDGDTIFESFSFGPEGARRSSGRGGGGGFEDIGDIFGFGRQRRSAGGGFAPQPGADMEITLPV
SFEEAAEGASKRVGLPNGKQIDIKIAAGTREGHRMRLKGQGEPSAMGGPPGDAYVTISYAPHPIFERDGDDLRQNVDVAL
ADAVLGAKVRVPTLKGAVELAIPAWTSGGRTFRLRGKGLPTASGGHGDLLVRTNLVLPKDKDGDLEALMKKLREQAD
>Mature_317_residues
MRDPYDVLGVSKTADEAEIKRAYRKLAKKLHPDANASDPKAQDRFAELNTAHEILEDKEKRAQYDRGEIDAEGKPKAPEF
TGFRGGGPRRGPGGFSGYDGDTIFESFSFGPEGARRSSGRGGGGGFEDIGDIFGFGRQRRSAGGGFAPQPGADMEITLPV
SFEEAAEGASKRVGLPNGKQIDIKIAAGTREGHRMRLKGQGEPSAMGGPPGDAYVTISYAPHPIFERDGDDLRQNVDVAL
ADAVLGAKVRVPTLKGAVELAIPAWTSGGRTFRLRGKGLPTASGGHGDLLVRTNLVLPKDKDGDLEALMKKLREQAD

Specific function: DNA-Binding Protein That Preferentially Recognizes A Curved DNA Sequence. It Is Probably A Functional Analog Of Dnaj; Displays Overlapping Activities With Dnaj, But Functions Under Different Conditions, Probably Acting As A Molecular Chaperone In An Adapt

COG id: COG2214

COG function: function code O; DnaJ-class molecular chaperone

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

Organism=Homo sapiens, GI7706495, Length=334, Percent_Identity=30.8383233532934, Blast_Score=119, Evalue=3e-27,
Organism=Homo sapiens, GI205360838, Length=362, Percent_Identity=27.6243093922652, Blast_Score=112, Evalue=4e-25,
Organism=Homo sapiens, GI205360840, Length=362, Percent_Identity=27.6243093922652, Blast_Score=112, Evalue=5e-25,
Organism=Homo sapiens, GI6631085, Length=341, Percent_Identity=30.4985337243402, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI5453690, Length=344, Percent_Identity=29.3604651162791, Blast_Score=104, Evalue=8e-23,
Organism=Homo sapiens, GI201862587, Length=345, Percent_Identity=28.695652173913, Blast_Score=102, Evalue=5e-22,
Organism=Homo sapiens, GI56549115, Length=345, Percent_Identity=28.4057971014493, Blast_Score=102, Evalue=6e-22,
Organism=Homo sapiens, GI201862518, Length=345, Percent_Identity=28.695652173913, Blast_Score=101, Evalue=7e-22,
Organism=Homo sapiens, GI4504511, Length=283, Percent_Identity=31.095406360424, Blast_Score=93, Evalue=3e-19,
Organism=Homo sapiens, GI194328760, Length=344, Percent_Identity=26.7441860465116, Blast_Score=85, Evalue=8e-17,
Organism=Homo sapiens, GI194328758, Length=344, Percent_Identity=26.7441860465116, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI56687498, Length=64, Percent_Identity=56.25, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI39204547, Length=324, Percent_Identity=26.2345679012346, Blast_Score=78, Evalue=8e-15,
Organism=Homo sapiens, GI24308127, Length=65, Percent_Identity=49.2307692307692, Blast_Score=73, Evalue=4e-13,
Organism=Homo sapiens, GI29126218, Length=62, Percent_Identity=53.2258064516129, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI45504382, Length=62, Percent_Identity=53.2258064516129, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI5031741, Length=62, Percent_Identity=54.8387096774194, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI9558755, Length=169, Percent_Identity=33.1360946745562, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI23503241, Length=96, Percent_Identity=39.5833333333333, Blast_Score=65, Evalue=7e-11,
Organism=Escherichia coli, GI1787235, Length=326, Percent_Identity=35.8895705521472, Blast_Score=158, Evalue=5e-40,
Organism=Escherichia coli, GI1786197, Length=137, Percent_Identity=42.3357664233577, Blast_Score=112, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI17534355, Length=322, Percent_Identity=31.9875776397516, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI212645553, Length=65, Percent_Identity=58.4615384615385, Blast_Score=84, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI17554644, Length=76, Percent_Identity=50, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI115532378, Length=104, Percent_Identity=39.4230769230769, Blast_Score=71, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI86563276, Length=68, Percent_Identity=51.4705882352941, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17553096, Length=132, Percent_Identity=31.0606060606061, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17553098, Length=132, Percent_Identity=31.0606060606061, Blast_Score=67, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6323813, Length=106, Percent_Identity=46.2264150943396, Blast_Score=71, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6324265, Length=185, Percent_Identity=35.6756756756757, Blast_Score=68, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6322194, Length=62, Percent_Identity=50, Blast_Score=67, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6323870, Length=70, Percent_Identity=45.7142857142857, Blast_Score=66, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24658562, Length=351, Percent_Identity=31.6239316239316, Blast_Score=116, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24658555, Length=351, Percent_Identity=31.6239316239316, Blast_Score=116, Evalue=2e-26,
Organism=Drosophila melanogaster, GI85726398, Length=350, Percent_Identity=30.2857142857143, Blast_Score=115, Evalue=5e-26,
Organism=Drosophila melanogaster, GI18858081, Length=362, Percent_Identity=26.5193370165746, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI19920464, Length=66, Percent_Identity=50, Blast_Score=74, Evalue=9e-14,
Organism=Drosophila melanogaster, GI45552813, Length=64, Percent_Identity=50, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI45549272, Length=64, Percent_Identity=50, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI45552811, Length=64, Percent_Identity=50, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI17737735, Length=62, Percent_Identity=51.6129032258064, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24668523, Length=62, Percent_Identity=51.6129032258064, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24645889, Length=62, Percent_Identity=53.2258064516129, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI28574723, Length=62, Percent_Identity=51.6129032258064, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI20129487, Length=81, Percent_Identity=49.3827160493827, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24584014, Length=81, Percent_Identity=49.3827160493827, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24654066, Length=66, Percent_Identity=50, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24654070, Length=66, Percent_Identity=50, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24654068, Length=66, Percent_Identity=50, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24654072, Length=66, Percent_Identity=50, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI161077138, Length=66, Percent_Identity=50, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI21358273, Length=65, Percent_Identity=53.8461538461538, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002939
- InterPro:   IPR001623
- InterPro:   IPR018253
- InterPro:   IPR008971
- InterPro:   IPR015609
- InterPro:   IPR003095 [H]

Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C [H]

EC number: NA

Molecular weight: Translated: 33799; Mature: 33799

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: PS00636 DNAJ_1 ; PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDPYDVLGVSKTADEAEIKRAYRKLAKKLHPDANASDPKAQDRFAELNTAHEILEDKEK
CCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RAQYDRGEIDAEGKPKAPEFTGFRGGGPRRGPGGFSGYDGDTIFESFSFGPEGARRSSGR
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCC
GGGGGFEDIGDIFGFGRQRRSAGGGFAPQPGADMEITLPVSFEEAAEGASKRVGLPNGKQ
CCCCCHHHHHHHHHCCHHHHCCCCCCCCCCCCCEEEEEECCHHHHHCCHHHCCCCCCCCE
IDIKIAAGTREGHRMRLKGQGEPSAMGGPPGDAYVTISYAPHPIFERDGDDLRQNVDVAL
EEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHCCCHHH
ADAVLGAKVRVPTLKGAVELAIPAWTSGGRTFRLRGKGLPTASGGHGDLLVRTNLVLPKD
HHHHHCCEEECCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEECCCC
KDGDLEALMKKLREQAD
CCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MRDPYDVLGVSKTADEAEIKRAYRKLAKKLHPDANASDPKAQDRFAELNTAHEILEDKEK
CCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RAQYDRGEIDAEGKPKAPEFTGFRGGGPRRGPGGFSGYDGDTIFESFSFGPEGARRSSGR
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCC
GGGGGFEDIGDIFGFGRQRRSAGGGFAPQPGADMEITLPVSFEEAAEGASKRVGLPNGKQ
CCCCCHHHHHHHHHCCHHHHCCCCCCCCCCCCCEEEEEECCHHHHHCCHHHCCCCCCCCE
IDIKIAAGTREGHRMRLKGQGEPSAMGGPPGDAYVTISYAPHPIFERDGDDLRQNVDVAL
EEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHCCCHHH
ADAVLGAKVRVPTLKGAVELAIPAWTSGGRTFRLRGKGLPTASGGHGDLLVRTNLVLPKD
HHHHHCCEEECCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEECCCC
KDGDLEALMKKLREQAD
CCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]