Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154246395
Identifier: 154246395
GI number: 154246395
Start: 2742550
End: 2743278
Strand: Direct
Name: 154246395
Synonym: Xaut_2454
Alternate gene names: NA
Gene position: 2742550-2743278 (Clockwise)
Preceding gene: 154246394
Following gene: 154246396
Centisome position: 51.66
GC content: 71.33
Gene sequence:
>729_bases ATGACCCAACCCTGCGCCAGAACCGCCGCCGCCCCCGTTGTGGCCCCCGCCAGCCGTGAGGCCGACACGCGCAGTGCCGA CCGCGCGCGCTCCGGCCGCGCGCGCTGGCGGCTGTGGCTGATGCGGGCGCTGGCGGTGGGCGGCATCGTCGGCCTGTGCC TCGTCTTGTGGAATCGCATCCCCCTGCACACCCGCATGATCTGGAAAAGCTACCGCGTGGCGCTGATGACGGGCGCGCCG GTGCTGGCCCTCGGCGACAGCATCACCTTTCAGGCCGCGCCTTCCCACCTGTGCGGGACCAAGGTGCTGAATTCCGGCAT CCCGGGCGACCGGATCGACGATCTTCTCGCCCGCGCGCCCATGTTCAGCCGGCTGGCGACGCCCCGGCAGGTGGTGGTGG CCATCGGCGTCAACGACGCCCGCACCGGCCACATGGACATCGGGACCTGGGCCGCCAAGTACCGCACCCTGCTGGGCTAT TTCCCCAAGAGCGCGCTGGTGCTGGTGGAGGTCAATCCGGTCGACCTCGGCAATCCGCACTATCTGCCGGTGCATGACCG GGACTTCATCGCCAGCCAGAACGCCGCCATTCGCGTGCTGGCGGGCGAGACCGGCGCCCGCGTGGTGACAGCGCCGGCCG CCTCTCCCACCATGGATGGGCTCCACCCCGACAAGACCGGCGTGGTCCTGTGGCAGCAGCGGCTGGCGGCGGTCGCCTGC GCGGGGTGA
Upstream 100 bases:
>100_bases CGGCGCTGGCGCGGGACTAGAGCGGTTTCGAGGACCGGGCGGGCCTCACATCCATTGGGCGGCACAGCAGTTGCTTTATA GAATTGAAAGGCGAACCGTC
Downstream 100 bases:
>100_bases CGCTTGTGGGTTGATCGGGGTGGCCGTGGCAGGCCGCCCGGCCGCTGCGACATGGCGCGCCGGATCAAGCCCGGCGGCAG GTGGGGTTCCGCTTTCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MTQPCARTAAAPVVAPASREADTRSADRARSGRARWRLWLMRALAVGGIVGLCLVLWNRIPLHTRMIWKSYRVALMTGAP VLALGDSITFQAAPSHLCGTKVLNSGIPGDRIDDLLARAPMFSRLATPRQVVVAIGVNDARTGHMDIGTWAAKYRTLLGY FPKSALVLVEVNPVDLGNPHYLPVHDRDFIASQNAAIRVLAGETGARVVTAPAASPTMDGLHPDKTGVVLWQQRLAAVAC AG
Sequences:
>Translated_242_residues MTQPCARTAAAPVVAPASREADTRSADRARSGRARWRLWLMRALAVGGIVGLCLVLWNRIPLHTRMIWKSYRVALMTGAP VLALGDSITFQAAPSHLCGTKVLNSGIPGDRIDDLLARAPMFSRLATPRQVVVAIGVNDARTGHMDIGTWAAKYRTLLGY FPKSALVLVEVNPVDLGNPHYLPVHDRDFIASQNAAIRVLAGETGARVVTAPAASPTMDGLHPDKTGVVLWQQRLAAVAC AG >Mature_241_residues TQPCARTAAAPVVAPASREADTRSADRARSGRARWRLWLMRALAVGGIVGLCLVLWNRIPLHTRMIWKSYRVALMTGAPV LALGDSITFQAAPSHLCGTKVLNSGIPGDRIDDLLARAPMFSRLATPRQVVVAIGVNDARTGHMDIGTWAAKYRTLLGYF PKSALVLVEVNPVDLGNPHYLPVHDRDFIASQNAAIRVLAGETGARVVTAPAASPTMDGLHPDKTGVVLWQQRLAAVACA G
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25927; Mature: 25796
Theoretical pI: Translated: 10.75; Mature: 10.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQPCARTAAAPVVAPASREADTRSADRARSGRARWRLWLMRALAVGGIVGLCLVLWNRI CCCCHHHHCCCCEECCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC PLHTRMIWKSYRVALMTGAPVLALGDSITFQAAPSHLCGTKVLNSGIPGDRIDDLLARAP CHHHHHHHHHHEEEEEECCCEEEECCCEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHCH MFSRLATPRQVVVAIGVNDARTGHMDIGTWAAKYRTLLGYFPKSALVLVEVNPVDLGNPH HHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCC YLPVHDRDFIASQNAAIRVLAGETGARVVTAPAASPTMDGLHPDKTGVVLWQQRLAAVAC EECCCCCHHHCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHC AG CC >Mature Secondary Structure TQPCARTAAAPVVAPASREADTRSADRARSGRARWRLWLMRALAVGGIVGLCLVLWNRI CCCHHHHCCCCEECCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC PLHTRMIWKSYRVALMTGAPVLALGDSITFQAAPSHLCGTKVLNSGIPGDRIDDLLARAP CHHHHHHHHHHEEEEEECCCEEEECCCEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHCH MFSRLATPRQVVVAIGVNDARTGHMDIGTWAAKYRTLLGYFPKSALVLVEVNPVDLGNPH HHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCC YLPVHDRDFIASQNAAIRVLAGETGARVVTAPAASPTMDGLHPDKTGVVLWQQRLAAVAC EECCCCCHHHCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHC AG CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA