Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
---|---|
Accession | NC_009720 |
Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is 154246336
Identifier: 154246336
GI number: 154246336
Start: 2673104
End: 2673682
Strand: Direct
Name: 154246336
Synonym: Xaut_2395
Alternate gene names: NA
Gene position: 2673104-2673682 (Clockwise)
Preceding gene: 154246335
Following gene: 154246337
Centisome position: 50.35
GC content: 63.9
Gene sequence:
>579_bases ATGTCCTTCCCTCCGATCCGCCGTGTCGTCACCGGGCACGACGCGGAAGCCCAGGCGATTATCGTCACCGATGGCGCGCT GCCGCATGTGGTGGAATTGGCGCATATACCGGGCACGATTTTTCATGAGGTCTGGTCGACCGCCGGCAGCCCGGCGCCGG TGGGCAATGGCCCCGATCCGACCCTCGGGGCTCTGAGCCTGCCGCCACCGGAGAACGGCACCCGTATTCGTTTCGTGGAT ATTCCGCCGGATACGGACGAATTCATGCTGCACGGCGCCGCGCGCATGACGGCGGCGTTCGCTGAAATCGGTGATGCGTC TGCCTCCACGGTGAAGCTCCATTCGCCGCATCCGCTGATGCACCGGACGCAATCCATCGACTATGGCATTGTGATTTCAG GTGAGATGACGCTTGTGCTGGACAGGGGCGAGACCTTGCTGCGGCAGGGCGATGTGGTCATCCAGCGCGGCACCAATCAT GCGTGGGCCAACCGGTCGGGCCAGCCGTGCCGGATGCTGTTCATCCTGGTGGACGGACGCTACGACCCCGAAATCGCTCC TGACGGGAGACACCCATGA
Upstream 100 bases:
>100_bases GTCGCCATGGTCCTGTTCTCGCGCGTCCATGCCGCGCCTCGGGCCGTGCTCGCGGCCCCTCCCGCTCAAGCGTGAACCCT TACAGCAGCTGGAGATGATC
Downstream 100 bases:
>100_bases AATTCGCCACTTATGCTGATGGCTCCCTCGACGGGCGGCTCTTGATTGTCTCAAGGGACCAGTCCCGCGCCGTCGATGCC ACGGCGATCGCCCCCAACCT
Product: cupin 2 domain-containing protein
Products: NA
Alternate protein names: Cupin 2 Conserved Barrel Domain Protein; Cupin Superfamily Protein; Cupin 2 Barrel; Transcriptional Regulator Protein; Cupin Domain-Containing Protein
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MSFPPIRRVVTGHDAEAQAIIVTDGALPHVVELAHIPGTIFHEVWSTAGSPAPVGNGPDPTLGALSLPPPENGTRIRFVD IPPDTDEFMLHGAARMTAAFAEIGDASASTVKLHSPHPLMHRTQSIDYGIVISGEMTLVLDRGETLLRQGDVVIQRGTNH AWANRSGQPCRMLFILVDGRYDPEIAPDGRHP
Sequences:
>Translated_192_residues MSFPPIRRVVTGHDAEAQAIIVTDGALPHVVELAHIPGTIFHEVWSTAGSPAPVGNGPDPTLGALSLPPPENGTRIRFVD IPPDTDEFMLHGAARMTAAFAEIGDASASTVKLHSPHPLMHRTQSIDYGIVISGEMTLVLDRGETLLRQGDVVIQRGTNH AWANRSGQPCRMLFILVDGRYDPEIAPDGRHP >Mature_191_residues SFPPIRRVVTGHDAEAQAIIVTDGALPHVVELAHIPGTIFHEVWSTAGSPAPVGNGPDPTLGALSLPPPENGTRIRFVDI PPDTDEFMLHGAARMTAAFAEIGDASASTVKLHSPHPLMHRTQSIDYGIVISGEMTLVLDRGETLLRQGDVVIQRGTNHA WANRSGQPCRMLFILVDGRYDPEIAPDGRHP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20669; Mature: 20538
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFPPIRRVVTGHDAEAQAIIVTDGALPHVVELAHIPGTIFHEVWSTAGSPAPVGNGPDP CCCCCCCHHHCCCCCCCEEEEEECCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCC TLGALSLPPPENGTRIRFVDIPPDTDEFMLHGAARMTAAFAEIGDASASTVKLHSPHPLM CCCEEECCCCCCCCEEEEEECCCCCHHHEEHHHHHHHHHHHHHCCCCCCEEEEECCCCHH HRTQSIDYGIVISGEMTLVLDRGETLLRQGDVVIQRGTNHAWANRSGQPCRMLFILVDGR HHCCCCCEEEEECCCEEEEEECCCHHHHCCCEEEEECCCCCCCCCCCCCEEEEEEEECCC YDPEIAPDGRHP CCCCCCCCCCCC >Mature Secondary Structure SFPPIRRVVTGHDAEAQAIIVTDGALPHVVELAHIPGTIFHEVWSTAGSPAPVGNGPDP CCCCCCHHHCCCCCCCEEEEEECCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCC TLGALSLPPPENGTRIRFVDIPPDTDEFMLHGAARMTAAFAEIGDASASTVKLHSPHPLM CCCEEECCCCCCCCEEEEEECCCCCHHHEEHHHHHHHHHHHHHCCCCCCEEEEECCCCHH HRTQSIDYGIVISGEMTLVLDRGETLLRQGDVVIQRGTNHAWANRSGQPCRMLFILVDGR HHCCCCCEEEEECCCEEEEEECCCHHHHCCCEEEEECCCCCCCCCCCCCEEEEEEEECCC YDPEIAPDGRHP CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA