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The map label for this gene is omp31 [H]

Identifier: 154246284

GI number: 154246284

Start: 2616326

End: 2617024

Strand: Reverse

Name: omp31 [H]

Synonym: Xaut_2342

Alternate gene names: 154246284

Gene position: 2617024-2616326 (Counterclockwise)

Preceding gene: 154246285

Following gene: 154246283

Centisome position: 49.29

GC content: 62.52

Gene sequence:

>699_bases
ATGTTGAAGCGTGCACTTCTGGGCGCCACCGCCCTCGCCCTCCTCGCCGGCTCTGCGTCCGCGGCGGATCTCGCCACCCG
CTATCCCGTGAAGGCGGCGCCCATTCCGGTGCAGACGTTCTCCTGGACCGGCTTCTACATCGGCGGCAACGTCGGCTGGG
GCTGGGCTGACAACACCTATGACGTGACCCCGTTCGGCTCGCTCATCGGCTATTCCTACAGCCCCGGCACCGGTAACGGC
TTCATCGGCGGCTTGCAGACCGGCTACAATTACCAGTTCGCCAACAACGTCGTTATCGGCGTCGAAGCCGACTTCGATTG
GTCGGACATCGGCAGCTCCAGCCTTGTGGTGGGCGGCCCGTTCACCGGCGGCGCCATCTCGCAGAACATCGACTACTTCG
GCACCATCCGTGCCCGCCTCGGCTACGGCATCGACCGCTTCCTGCCCTACATCACGGGTGGCGCGGCCTGGGCCAAGCAG
AATTTCAGCGACTTCTACGGTAACACCTACAACGACACCAAGTGGGGTTGGACCGTCGGTGCCGGCGTCGAGTACGCCAT
CACCAACAACTGGACGGTCAAGGCCGAGTATCTCTATCTCGGCTTCAACAAGAACACCACCAACGACTACTTCGGCGACT
CCTACTCCGTCGGCTCGAACATCAGCACCGCCAAGCTGGGCGTGAACTACAAGTTCTGA

Upstream 100 bases:

>100_bases
GGCCCGTTCGCTACAGACGACCGCATCACCTGGCTGTATGACGTAACCACTCGTCGGCGAGGCCCCGGGCTGGACCGATT
GACCAACAAAGGTAATGAAC

Downstream 100 bases:

>100_bases
TCCCGCGCTACCCGAGACGTTTCTTCGGGTGAGAGAGGGGCTCCCGGCCGTGGCCGGGAGCCCTTTTGTTTGGCCGCCCC
GCTCATTGCGGACCCACGCA

Product: porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MLKRALLGATALALLAGSASAADLATRYPVKAAPIPVQTFSWTGFYIGGNVGWGWADNTYDVTPFGSLIGYSYSPGTGNG
FIGGLQTGYNYQFANNVVIGVEADFDWSDIGSSSLVVGGPFTGGAISQNIDYFGTIRARLGYGIDRFLPYITGGAAWAKQ
NFSDFYGNTYNDTKWGWTVGAGVEYAITNNWTVKAEYLYLGFNKNTTNDYFGDSYSVGSNISTAKLGVNYKF

Sequences:

>Translated_232_residues
MLKRALLGATALALLAGSASAADLATRYPVKAAPIPVQTFSWTGFYIGGNVGWGWADNTYDVTPFGSLIGYSYSPGTGNG
FIGGLQTGYNYQFANNVVIGVEADFDWSDIGSSSLVVGGPFTGGAISQNIDYFGTIRARLGYGIDRFLPYITGGAAWAKQ
NFSDFYGNTYNDTKWGWTVGAGVEYAITNNWTVKAEYLYLGFNKNTTNDYFGDSYSVGSNISTAKLGVNYKF
>Mature_232_residues
MLKRALLGATALALLAGSASAADLATRYPVKAAPIPVQTFSWTGFYIGGNVGWGWADNTYDVTPFGSLIGYSYSPGTGNG
FIGGLQTGYNYQFANNVVIGVEADFDWSDIGSSSLVVGGPFTGGAISQNIDYFGTIRARLGYGIDRFLPYITGGAAWAKQ
NFSDFYGNTYNDTKWGWTVGAGVEYAITNNWTVKAEYLYLGFNKNTTNDYFGDSYSVGSNISTAKLGVNYKF

Specific function: Major outer membrane protein associated with peptidoglycans. May function as a porin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the omp25/ropB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017690
- InterPro:   IPR011250
- InterPro:   IPR000498 [H]

Pfam domain/function: PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 24917; Mature: 24917

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKRALLGATALALLAGSASAADLATRYPVKAAPIPVQTFSWTGFYIGGNVGWGWADNTY
CCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCE
DVTPFGSLIGYSYSPGTGNGFIGGLQTGYNYQFANNVVIGVEADFDWSDIGSSSLVVGGP
EECCCHHHHCCCCCCCCCCCEEECCCCCCCEEEECCEEEEEECCCCHHHCCCCCEEEECC
FTGGAISQNIDYFGTIRARLGYGIDRFLPYITGGAAWAKQNFSDFYGNTYNDTKWGWTVG
CCCCHHHCCCCEEEEEEHHHCCCHHHHHHHHCCCHHHHHCCCHHHCCCCCCCCCCCEEEC
AGVEYAITNNWTVKAEYLYLGFNKNTTNDYFGDSYSVGSNISTAKLGVNYKF
CCEEEEEECCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MLKRALLGATALALLAGSASAADLATRYPVKAAPIPVQTFSWTGFYIGGNVGWGWADNTY
CCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCE
DVTPFGSLIGYSYSPGTGNGFIGGLQTGYNYQFANNVVIGVEADFDWSDIGSSSLVVGGP
EECCCHHHHCCCCCCCCCCCEEECCCCCCCEEEECCEEEEEECCCCHHHCCCCCEEEECC
FTGGAISQNIDYFGTIRARLGYGIDRFLPYITGGAAWAKQNFSDFYGNTYNDTKWGWTVG
CCCCHHHCCCCEEEEEEHHHCCCHHHHHHHHCCCHHHHHCCCHHHCCCCCCCCCCCEEEC
AGVEYAITNNWTVKAEYLYLGFNKNTTNDYFGDSYSVGSNISTAKLGVNYKF
CCEEEEEECCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8751924; 11756688 [H]