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The map label for this gene is omp31 [H]

Identifier: 154246283

GI number: 154246283

Start: 2615405

End: 2616115

Strand: Reverse

Name: omp31 [H]

Synonym: Xaut_2341

Alternate gene names: 154246283

Gene position: 2616115-2615405 (Counterclockwise)

Preceding gene: 154246284

Following gene: 154246281

Centisome position: 49.28

GC content: 65.96

Gene sequence:

>711_bases
ATGGAACGGACGGTATTGGGCGGATCAGGCAGCATCCCTCGTGGCGCCTCCCTTGCCATGCCTGCGATCCTGCTCGCAGC
CCTGCTGTCGGCCGGACCTGCAGCAGCAGCGGATCTTGGACGCCCGACGCAGCCGGCAATCCCGGCGGCGGTGCCCGCTC
CGGTGTTTTCGTGGACCGGCTTTTATATCGGCGGCAATGCCGGCTATGGCTGGGGGTCGGGCCAGGACGAGCTTGGTGTG
GCCGGTGTCGATCCCAAAGGATGGTTCGGCGGCGGTCAGGCCGGCTACAATTACCAGTTCAGCAACAACATCGTGGCCGG
CATCGAGGCGGACATCCAGGGCGGCGACATCGGCGCCAGCGCATCCGGTCCGCTGGGTGGGCAGCTGGGTGTCCTGGGCC
TGTCGAGCACCCTCGATTCGTTCGGAACCGTGCGCGGCCGGCTCGGCTACGCCTTCGGCCCGATCTTGCCCTATGTCACC
GGCGGCTTCGCCTGGGGCAACAATTCCATCGATTATCTGGGCGCGAGCCAGTCGCAGACCCACACCGGATGGACCGCCGG
CGCCGGCATCGAATATGCGCTGACCGACCATTGGACTGCGAAGACCGAGTATCTCTACACGGACCTCGGCTCCAAGTTCT
ACGACACCCTCGGCGCCAGCGCCGGCGTGACCGCGCAGACCGCCAGGATCGGCATCAACTACAAGTTCTGA

Upstream 100 bases:

>100_bases
AATGCGAATCGGCGCTCGCCATCGCTTTGCCGCCGAGCCGCCCTTGCCCCGCCCGCGCAACGGACCAAGTTGGAAGGCGG
ACAGACGCGGGAGCGCGGCC

Downstream 100 bases:

>100_bases
TCCCGCGCGCGCCAGCCGCGCCGCACATCAGGACGCCTCGACCCGGAGCGGGATCGGCTTCTCGTCGCCGCGTTCGTCGC
GCACGGCGAAGTGGTAGGCG

Product: porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MERTVLGGSGSIPRGASLAMPAILLAALLSAGPAAAADLGRPTQPAIPAAVPAPVFSWTGFYIGGNAGYGWGSGQDELGV
AGVDPKGWFGGGQAGYNYQFSNNIVAGIEADIQGGDIGASASGPLGGQLGVLGLSSTLDSFGTVRGRLGYAFGPILPYVT
GGFAWGNNSIDYLGASQSQTHTGWTAGAGIEYALTDHWTAKTEYLYTDLGSKFYDTLGASAGVTAQTARIGINYKF

Sequences:

>Translated_236_residues
MERTVLGGSGSIPRGASLAMPAILLAALLSAGPAAAADLGRPTQPAIPAAVPAPVFSWTGFYIGGNAGYGWGSGQDELGV
AGVDPKGWFGGGQAGYNYQFSNNIVAGIEADIQGGDIGASASGPLGGQLGVLGLSSTLDSFGTVRGRLGYAFGPILPYVT
GGFAWGNNSIDYLGASQSQTHTGWTAGAGIEYALTDHWTAKTEYLYTDLGSKFYDTLGASAGVTAQTARIGINYKF
>Mature_236_residues
MERTVLGGSGSIPRGASLAMPAILLAALLSAGPAAAADLGRPTQPAIPAAVPAPVFSWTGFYIGGNAGYGWGSGQDELGV
AGVDPKGWFGGGQAGYNYQFSNNIVAGIEADIQGGDIGASASGPLGGQLGVLGLSSTLDSFGTVRGRLGYAFGPILPYVT
GGFAWGNNSIDYLGASQSQTHTGWTAGAGIEYALTDHWTAKTEYLYTDLGSKFYDTLGASAGVTAQTARIGINYKF

Specific function: Major outer membrane protein associated with peptidoglycans. May function as a porin [H]

COG id: COG3637

COG function: function code M; Opacity protein and related surface antigens

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the omp25/ropB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017690
- InterPro:   IPR011250
- InterPro:   IPR000498 [H]

Pfam domain/function: PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 23927; Mature: 23927

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERTVLGGSGSIPRGASLAMPAILLAALLSAGPAAAADLGRPTQPAIPAAVPAPVFSWTG
CCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCEECCC
FYIGGNAGYGWGSGQDELGVAGVDPKGWFGGGQAGYNYQFSNNIVAGIEADIQGGDIGAS
EEEECCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCEEEECCCEEEEEEEECCCCCCCCC
ASGPLGGQLGVLGLSSTLDSFGTVRGRLGYAFGPILPYVTGGFAWGNNSIDYLGASQSQT
CCCCCCCCEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEECCCCEEEECCCCCCC
HTGWTAGAGIEYALTDHWTAKTEYLYTDLGSKFYDTLGASAGVTAQTARIGINYKF
CCCEECCCCEEEEECCCCCCCCEEEEHHHHHHHHHHHCCCCCCEEEEEEEEEEECC
>Mature Secondary Structure
MERTVLGGSGSIPRGASLAMPAILLAALLSAGPAAAADLGRPTQPAIPAAVPAPVFSWTG
CCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCEECCC
FYIGGNAGYGWGSGQDELGVAGVDPKGWFGGGQAGYNYQFSNNIVAGIEADIQGGDIGAS
EEEECCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCEEEECCCEEEEEEEECCCCCCCCC
ASGPLGGQLGVLGLSSTLDSFGTVRGRLGYAFGPILPYVTGGFAWGNNSIDYLGASQSQT
CCCCCCCCEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEECCCCEEEECCCCCCC
HTGWTAGAGIEYALTDHWTAKTEYLYTDLGSKFYDTLGASAGVTAQTARIGINYKF
CCCEECCCCEEEEECCCCCCCCEEEEHHHHHHHHHHHCCCCCCEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8751924; 11756688 [H]