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The map label for this gene is ydhP [H]

Identifier: 154246250

GI number: 154246250

Start: 2576740

End: 2577978

Strand: Reverse

Name: ydhP [H]

Synonym: Xaut_2308

Alternate gene names: 154246250

Gene position: 2577978-2576740 (Counterclockwise)

Preceding gene: 154246251

Following gene: 154246246

Centisome position: 48.56

GC content: 69.98

Gene sequence:

>1239_bases
ATGGCCGCACAGCCTTCCGCTCCGTCGCCCGCTCCGGTGCGCGGCAATCCCCGCCTGCCCCTGCTTGCGCTGGGCGCTGC
CGCCTTCGGCATCGGCACCACCGAATTCGTCATCATGGGCCTCTTGCCCCAGGTGGCCGGCGACCTTCACGTCACCATTC
CGCAAGCCGGCCTGCTGGTGACGGGCTACGCCCTGTCGGTCACCTTCGGCTCGCCCTTCCTCGCGGTGGCGACGGCACGC
ATGGACCGGCGAAGGGCCCTTCTGGTGCTGATGGGCGTCTTCATCCTCGGCAATCTCATGTGCGCCCTCGCGCCATCCTA
CTGGCTGCTCATGGGCGCGCGGGTGCTCACCGCATTGTGCCACGGCGCCTTCTTCGGCCTCGGCGCGGTGGTGGCGTCCG
CCCTCGTGCTGCCGGGCCGCAAGGCGCAGGCCATCGCCATGATGTTCGCGGGGCTGACGCTGGCCAACGTGCTGGGGGTG
CCGGCGGGGACGGCGCTGGGCGAGGCCATGGGCTGGCGCAGCCCGTTCTTCGTGGTGGTCGGCATCGGCATCGCCGCCGC
GCTGGCGCTGGCCGCCTTCCTGCCGCGCACCATCGAGGTGCCGCCCATGAACCTCAAGCGGGAGGCGAAGTCGCTGGGCA
GCCCGCAGGTGATGTTCGCCATGGCCATGAGCATCGTGTCGTCGGCGAGCCTGTTCAGCGTGTTCACCTACATCACGCCG
ATCCTCCAGAACGTCACCGGCATCAGCACCCAGGGGGTGACGATGATGCTGCTGCTGTTCGGCGTCGGTCTCACCTGCGG
CAATTTCCTCGGCGGCTGGCTGGCCGACTGGCGTCTGATGCCCTCGGTGATCGGCATCATCGCAGTGATCATCCCGCTTT
TGGCATCGTTCGCGCTCACCAGCCACGCGGTGGTGCCGGCGGCGCTGACCCTGTTCGTCTGGGGCGTGCTCGCCTTCGCC
CTCATCGCGCCATTGCAGTCGCGGGTGGTGAGCGAGGCGGCGAAAGCGCCAAACCTTGCCTCCACCCTCAACCAGGGCGC
GTTCAACTTCGGCAACGCCATCGGCGCCTGGGCCGGGGGCCTCGCGCTCACCGCCGGACTGCCCTATGCGGACCTGCCCT
TCATGGGCGCCACCATCGCCACGGCGGGGCTTGCCCTCGCCATCGCGTCCTACGCCCTCGACCTGAAGACGCAGCGCGAA
GCCTCGGCGGATGCGGCGCCGGCCGCCGGCCGGCCCTGA

Upstream 100 bases:

>100_bases
TTAAATGCATTTGGTGATTTTGCTGCACTGCGGCATAAATTGACGCTCATCATCCGGCGCCCTGCGCCCGAACCGGCTTC
CGCCCCATCCGGTGATCGTC

Downstream 100 bases:

>100_bases
CACCCGCCGCCGGGCGAAAGCTCAGAACCGCTCCGGCACCCGGTGGCGAGCGTAGTCCGCCTCCACATAGTCGTGGGACT
TCTGGCGCTTGGGCAGCTTG

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 411

Protein sequence:

>412_residues
MAAQPSAPSPAPVRGNPRLPLLALGAAAFGIGTTEFVIMGLLPQVAGDLHVTIPQAGLLVTGYALSVTFGSPFLAVATAR
MDRRRALLVLMGVFILGNLMCALAPSYWLLMGARVLTALCHGAFFGLGAVVASALVLPGRKAQAIAMMFAGLTLANVLGV
PAGTALGEAMGWRSPFFVVVGIGIAAALALAAFLPRTIEVPPMNLKREAKSLGSPQVMFAMAMSIVSSASLFSVFTYITP
ILQNVTGISTQGVTMMLLLFGVGLTCGNFLGGWLADWRLMPSVIGIIAVIIPLLASFALTSHAVVPAALTLFVWGVLAFA
LIAPLQSRVVSEAAKAPNLASTLNQGAFNFGNAIGAWAGGLALTAGLPYADLPFMGATIATAGLALAIASYALDLKTQRE
ASADAAPAAGRP

Sequences:

>Translated_412_residues
MAAQPSAPSPAPVRGNPRLPLLALGAAAFGIGTTEFVIMGLLPQVAGDLHVTIPQAGLLVTGYALSVTFGSPFLAVATAR
MDRRRALLVLMGVFILGNLMCALAPSYWLLMGARVLTALCHGAFFGLGAVVASALVLPGRKAQAIAMMFAGLTLANVLGV
PAGTALGEAMGWRSPFFVVVGIGIAAALALAAFLPRTIEVPPMNLKREAKSLGSPQVMFAMAMSIVSSASLFSVFTYITP
ILQNVTGISTQGVTMMLLLFGVGLTCGNFLGGWLADWRLMPSVIGIIAVIIPLLASFALTSHAVVPAALTLFVWGVLAFA
LIAPLQSRVVSEAAKAPNLASTLNQGAFNFGNAIGAWAGGLALTAGLPYADLPFMGATIATAGLALAIASYALDLKTQRE
ASADAAPAAGRP
>Mature_411_residues
AAQPSAPSPAPVRGNPRLPLLALGAAAFGIGTTEFVIMGLLPQVAGDLHVTIPQAGLLVTGYALSVTFGSPFLAVATARM
DRRRALLVLMGVFILGNLMCALAPSYWLLMGARVLTALCHGAFFGLGAVVASALVLPGRKAQAIAMMFAGLTLANVLGVP
AGTALGEAMGWRSPFFVVVGIGIAAALALAAFLPRTIEVPPMNLKREAKSLGSPQVMFAMAMSIVSSASLFSVFTYITPI
LQNVTGISTQGVTMMLLLFGVGLTCGNFLGGWLADWRLMPSVIGIIAVIIPLLASFALTSHAVVPAALTLFVWGVLAFAL
IAPLQSRVVSEAAKAPNLASTLNQGAFNFGNAIGAWAGGLALTAGLPYADLPFMGATIATAGLALAIASYALDLKTQREA
SADAAPAAGRP

Specific function: Unknown

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787947, Length=367, Percent_Identity=45.2316076294278, Blast_Score=275, Evalue=5e-75,
Organism=Escherichia coli, GI1786595, Length=394, Percent_Identity=32.994923857868, Blast_Score=198, Evalue=5e-52,
Organism=Escherichia coli, GI1787808, Length=351, Percent_Identity=30.1994301994302, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI145693198, Length=336, Percent_Identity=27.6785714285714, Blast_Score=103, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42127; Mature: 41995

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAQPSAPSPAPVRGNPRLPLLALGAAAFGIGTTEFVIMGLLPQVAGDLHVTIPQAGLLV
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEECCCCCEEE
TGYALSVTFGSPFLAVATARMDRRRALLVLMGVFILGNLMCALAPSYWLLMGARVLTALC
EEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HGAFFGLGAVVASALVLPGRKAQAIAMMFAGLTLANVLGVPAGTALGEAMGWRSPFFVVV
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHH
GIGIAAALALAAFLPRTIEVPPMNLKREAKSLGSPQVMFAMAMSIVSSASLFSVFTYITP
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ILQNVTGISTQGVTMMLLLFGVGLTCGNFLGGWLADWRLMPSVIGIIAVIIPLLASFALT
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SHAVVPAALTLFVWGVLAFALIAPLQSRVVSEAAKAPNLASTLNQGAFNFGNAIGAWAGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHCCHHHHHHHH
LALTAGLPYADLPFMGATIATAGLALAIASYALDLKTQREASADAAPAAGRP
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
AAQPSAPSPAPVRGNPRLPLLALGAAAFGIGTTEFVIMGLLPQVAGDLHVTIPQAGLLV
CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEECCCCCEEE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HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]