Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154246196
Identifier: 154246196
GI number: 154246196
Start: 2514453
End: 2516069
Strand: Direct
Name: 154246196
Synonym: Xaut_2254
Alternate gene names: NA
Gene position: 2514453-2516069 (Clockwise)
Preceding gene: 154246195
Following gene: 154246197
Centisome position: 47.36
GC content: 69.39
Gene sequence:
>1617_bases ATGAGCCCGCCCGCCGCATCGCCCGTTCTGCCTGCCGATCTGGCGGCGGCGCATGCGATGATCCTGGCCGAGCGCGCCAG GCGGATCGAGGCCGAGGCCGCAGCCTCCGGCGTCGAGGCCATGATCGCCCACCTCAAGCTGACGATCGAGAAGCTCAGGC GCGAGCTTTACGGCCAGCGCTCCGAGCGCACGGTGCGGCTCATCGACCAGATGGAACTCCAGCTCGAGGAACTGGAGGCC AGGGCGAGCGAGGACGAGATCGCGGCACAGGAGAGTGCGCGCCTGGCGTCACTGCCGGCGCCCGCGCCACGCCGTCGGCC CGTGCGCAAGCCCTTCCCCGAGCACCTGCCGCGCGAGCGCGTCGTCGTGCCGGCGCCGACCAGCTGTCCCTGCTGCGGCT CGATGAAGCTGTCGAAGCTTGGAGAGGACGTCACCGAGACTCTGGAGATCGTGCCGCGCTCCTGGAAGGTGATCCAGACG GTCCGCGAGAAGTTCACCTGCCGCCAGTGCGAGGCGATCACCCAGCCGCCGGCGCCCTTCCATGTGACGCCGCGCGCCTT CATGGGACCGCACCTGCTGGCGACAATCCTCTTCGAGAAGTTCGGGCAGCATCAGCCCTTGAACCGCCAGAGCGAACGCT ACGGCCGCGAGGGTATCGACCTCTCCGTCTCGACGCTGGCCGATCAGGTCGGTACGGCGACTGCAGCTCTGAGGCCTCTG CATGATCTGATTGCCCGGCACGTCATGGCGGCAGAGCGGCTGCATGCCGACGACACCACCGTGCCGATCCTGGCCAAGGG GAAGACCGATACGGGCCGGATCTGGACCTATGTGCGCGACGACCGCCCCTTCGGCGGTGCCGACCCGCCGGCGGCCCTAT ACTTCGCCTCGCGCGACAGGCGGCAGGCGCATCCGGATGCGCACCTCGCGGGCTGGCGGGGCATCCTCCAGGCCGACGCC TATGGCGGGTACAACGGCCTGTATGATCCCGCGCGTCCGGGCGGACCGGTCACGTCGGCGCTTTGCTGGTCCCATGCCAG AAGAGGCTTCTTCGAACTCGCAGACATCGCCGCGAGCGCGCGGCGCGGGCCCGGCGCCGCACCGGTGTCGCCCATCGCCA TGGAGGCGGTGAAGCGCATCGACGCTCTTTTCGAGATCGAACGCGGGATCAACGGCTTGAGCGCTAAGGAACGCCGGGAC GCCCGGCAGGCGCAGAGCCGGCCGCTCGTCGATGACCTGCACGCCTGGCTCGGCGAGCAGCGCCTCAAGCTGACCCGCTC GGCCTCGGTTGCCAAGCCGATCGACTACATGCTCAGGCGCTGGGATGGCTTTGCAACCGTCCTCGATGACGGCCGTGCCT GCCTGTCGAACAATGCAGCGGAGCGCGCCCTGCGCGGCTTCGCTCTGGGACGGAAGGCATGGCTCTTCGCCGGCTCCGAC CGCGGCGCCGAGCGCGCCGCCGCCATGGCGACGCTGATCACCACGGCGAAGCTCAACACCGTCGATCCGCAAGCCTGGCT CGCCGATGTACTCGCCCGCATCGCGGGCACGCCGCAGAGCCGGCTCGCGGAACTGTTGCCATGGAGCTGGCAAATGCGAA GCTGCCGGACGCCATAG
Upstream 100 bases:
>100_bases GGGATCGACTGGCGCAATCCGGTGGAGGCCTGGCGCCCGACCTCGGTCGGCTGAAGCTTTTTGCCTTGCGTTTGGAACGG GCTGTGATTCCATCCTTGCC
Downstream 100 bases:
>100_bases CTGCGACCCCGCGGCCCTCGCCGGAGGCTTACCTTGAGTTGGATGCTGGCGAAAGCCTTTTGCTGGCCATTCTCATCGAA CGGCAGGCCGCACTGCTCCT
Product: transposase IS66
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 538; Mature: 537
Protein sequence:
>538_residues MSPPAASPVLPADLAAAHAMILAERARRIEAEAAASGVEAMIAHLKLTIEKLRRELYGQRSERTVRLIDQMELQLEELEA RASEDEIAAQESARLASLPAPAPRRRPVRKPFPEHLPRERVVVPAPTSCPCCGSMKLSKLGEDVTETLEIVPRSWKVIQT VREKFTCRQCEAITQPPAPFHVTPRAFMGPHLLATILFEKFGQHQPLNRQSERYGREGIDLSVSTLADQVGTATAALRPL HDLIARHVMAAERLHADDTTVPILAKGKTDTGRIWTYVRDDRPFGGADPPAALYFASRDRRQAHPDAHLAGWRGILQADA YGGYNGLYDPARPGGPVTSALCWSHARRGFFELADIAASARRGPGAAPVSPIAMEAVKRIDALFEIERGINGLSAKERRD ARQAQSRPLVDDLHAWLGEQRLKLTRSASVAKPIDYMLRRWDGFATVLDDGRACLSNNAAERALRGFALGRKAWLFAGSD RGAERAAAMATLITTAKLNTVDPQAWLADVLARIAGTPQSRLAELLPWSWQMRSCRTP
Sequences:
>Translated_538_residues MSPPAASPVLPADLAAAHAMILAERARRIEAEAAASGVEAMIAHLKLTIEKLRRELYGQRSERTVRLIDQMELQLEELEA RASEDEIAAQESARLASLPAPAPRRRPVRKPFPEHLPRERVVVPAPTSCPCCGSMKLSKLGEDVTETLEIVPRSWKVIQT VREKFTCRQCEAITQPPAPFHVTPRAFMGPHLLATILFEKFGQHQPLNRQSERYGREGIDLSVSTLADQVGTATAALRPL HDLIARHVMAAERLHADDTTVPILAKGKTDTGRIWTYVRDDRPFGGADPPAALYFASRDRRQAHPDAHLAGWRGILQADA YGGYNGLYDPARPGGPVTSALCWSHARRGFFELADIAASARRGPGAAPVSPIAMEAVKRIDALFEIERGINGLSAKERRD ARQAQSRPLVDDLHAWLGEQRLKLTRSASVAKPIDYMLRRWDGFATVLDDGRACLSNNAAERALRGFALGRKAWLFAGSD RGAERAAAMATLITTAKLNTVDPQAWLADVLARIAGTPQSRLAELLPWSWQMRSCRTP >Mature_537_residues SPPAASPVLPADLAAAHAMILAERARRIEAEAAASGVEAMIAHLKLTIEKLRRELYGQRSERTVRLIDQMELQLEELEAR ASEDEIAAQESARLASLPAPAPRRRPVRKPFPEHLPRERVVVPAPTSCPCCGSMKLSKLGEDVTETLEIVPRSWKVIQTV REKFTCRQCEAITQPPAPFHVTPRAFMGPHLLATILFEKFGQHQPLNRQSERYGREGIDLSVSTLADQVGTATAALRPLH DLIARHVMAAERLHADDTTVPILAKGKTDTGRIWTYVRDDRPFGGADPPAALYFASRDRRQAHPDAHLAGWRGILQADAY GGYNGLYDPARPGGPVTSALCWSHARRGFFELADIAASARRGPGAAPVSPIAMEAVKRIDALFEIERGINGLSAKERRDA RQAQSRPLVDDLHAWLGEQRLKLTRSASVAKPIDYMLRRWDGFATVLDDGRACLSNNAAERALRGFALGRKAWLFAGSDR GAERAAAMATLITTAKLNTVDPQAWLADVLARIAGTPQSRLAELLPWSWQMRSCRTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 25 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004291 [H]
Pfam domain/function: PF03050 Transposase_25 [H]
EC number: NA
Molecular weight: Translated: 59183; Mature: 59052
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPPAASPVLPADLAAAHAMILAERARRIEAEAAASGVEAMIAHLKLTIEKLRRELYGQR CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SERTVRLIDQMELQLEELEARASEDEIAAQESARLASLPAPAPRRRPVRKPFPEHLPRER CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCC VVVPAPTSCPCCGSMKLSKLGEDVTETLEIVPRSWKVIQTVREKFTCRQCEAITQPPAPF EEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC HVTPRAFMGPHLLATILFEKFGQHQPLNRQSERYGREGIDLSVSTLADQVGTATAALRPL EECCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH HDLIARHVMAAERLHADDTTVPILAKGKTDTGRIWTYVRDDRPFGGADPPAALYFASRDR HHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCH RQAHPDAHLAGWRGILQADAYGGYNGLYDPARPGGPVTSALCWSHARRGFFELADIAASA HHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RRGPGAAPVSPIAMEAVKRIDALFEIERGINGLSAKERRDARQAQSRPLVDDLHAWLGEQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH RLKLTRSASVAKPIDYMLRRWDGFATVLDDGRACLSNNAAERALRGFALGRKAWLFAGSD HHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHCCCHHHHHHHHHHCCCCEEEEECCC RGAERAAAMATLITTAKLNTVDPQAWLADVLARIAGTPQSRLAELLPWSWQMRSCRTP CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHCCCCC >Mature Secondary Structure SPPAASPVLPADLAAAHAMILAERARRIEAEAAASGVEAMIAHLKLTIEKLRRELYGQR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SERTVRLIDQMELQLEELEARASEDEIAAQESARLASLPAPAPRRRPVRKPFPEHLPRER CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCC VVVPAPTSCPCCGSMKLSKLGEDVTETLEIVPRSWKVIQTVREKFTCRQCEAITQPPAPF EEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC HVTPRAFMGPHLLATILFEKFGQHQPLNRQSERYGREGIDLSVSTLADQVGTATAALRPL EECCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH HDLIARHVMAAERLHADDTTVPILAKGKTDTGRIWTYVRDDRPFGGADPPAALYFASRDR HHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCH RQAHPDAHLAGWRGILQADAYGGYNGLYDPARPGGPVTSALCWSHARRGFFELADIAASA HHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RRGPGAAPVSPIAMEAVKRIDALFEIERGINGLSAKERRDARQAQSRPLVDDLHAWLGEQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH RLKLTRSASVAKPIDYMLRRWDGFATVLDDGRACLSNNAAERALRGFALGRKAWLFAGSD HHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHCCCHHHHHHHHHHCCCCEEEEECCC RGAERAAAMATLITTAKLNTVDPQAWLADVLARIAGTPQSRLAELLPWSWQMRSCRTP CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]