Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154246184
Identifier: 154246184
GI number: 154246184
Start: 2502557
End: 2503372
Strand: Direct
Name: 154246184
Synonym: Xaut_2242
Alternate gene names: NA
Gene position: 2502557-2503372 (Clockwise)
Preceding gene: 154246183
Following gene: 154246185
Centisome position: 47.14
GC content: 60.17
Gene sequence:
>816_bases GTGTCGCGACGCAATAGGCGCAGACGCAGCACAGAAATCGGCAAGCTCGTTGCCGCAGCGCTACTGCTGCTGCTGTGCGC TATCATTGTCGCCGGCGTTGCGGTGTGGCGCTGGAATGCGCCCGCCCCTGTCGAACTGACCAAGGACACACTCTGCCCTG TGGGCGGACCCTGGGCGATCACGGTCGTTTTGCTGGATGCATCCGACGACATCCCCCCCGTTACGAAAGCGGAAATCCAG ACCGTGCTTCGCGACGCTGCGCGGACCATCCAGAAGGGAGAACTGCTGGAACTCCGGGCGCTGGATCCGCGCACTCCCGG CGGCCGCATTTTGTTTGAAAAGTGCAACCCCGGCGACGGGACCGATCTCAGCACCCTGTCCGCCAATCCCGATGCGGCGA AGCGGCGCTGGTTGAGCGAGTTCGATCGCCCGCTTACCGAAACGCTTGCGCACCTGGATGCGTCGTCTTCCGCCACGTCG CCGCTCCTAGCGACCATTCAGGCGATTGCCGTGCAGCGCTTCGGCGGCGCGGCCGCCCGTGAGCTTCGGAAGCGTCTGAT TGTGGTGTCCGACATGATCGAACATGGCCCTGAATATTCGCAATATAAGGGGGACCTATCTTACGGGCGCTTCAAAAAAA CCGCCACTTACAAGGCGACGCATACCAACCTGAACGGGGCGAGTGTCGATTTTTATTACATTCAAAGGATCAAGCCAATA CTGGACTCGGGAGCCCACATTCAATTTTGGCTTGATTGGATTGCAGACAGCAGCGGAACGCTTGGCGTAGCCAAAAAACT GCAGGGAGGCGGCTGA
Upstream 100 bases:
>100_bases CGGACGCTACTCGGCGGCCAGCTCGAAGAGTTGCACGCGGAGTACGAGCAGGCGATCGGCAAATATCACCAGCTGGACCA ACTCTTGCCGGAGACTGCTC
Downstream 100 bases:
>100_bases TGGCTCGTGTCGTTGCTAATGGACGGCGGGTTATTGCTCCCGCGCTTTTTATCCTGTTTGTCGTTATTGGCTGCTCGTTT ATCGTTACTGCGAAGATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MSRRNRRRRSTEIGKLVAAALLLLLCAIIVAGVAVWRWNAPAPVELTKDTLCPVGGPWAITVVLLDASDDIPPVTKAEIQ TVLRDAARTIQKGELLELRALDPRTPGGRILFEKCNPGDGTDLSTLSANPDAAKRRWLSEFDRPLTETLAHLDASSSATS PLLATIQAIAVQRFGGAAARELRKRLIVVSDMIEHGPEYSQYKGDLSYGRFKKTATYKATHTNLNGASVDFYYIQRIKPI LDSGAHIQFWLDWIADSSGTLGVAKKLQGGG
Sequences:
>Translated_271_residues MSRRNRRRRSTEIGKLVAAALLLLLCAIIVAGVAVWRWNAPAPVELTKDTLCPVGGPWAITVVLLDASDDIPPVTKAEIQ TVLRDAARTIQKGELLELRALDPRTPGGRILFEKCNPGDGTDLSTLSANPDAAKRRWLSEFDRPLTETLAHLDASSSATS PLLATIQAIAVQRFGGAAARELRKRLIVVSDMIEHGPEYSQYKGDLSYGRFKKTATYKATHTNLNGASVDFYYIQRIKPI LDSGAHIQFWLDWIADSSGTLGVAKKLQGGG >Mature_270_residues SRRNRRRRSTEIGKLVAAALLLLLCAIIVAGVAVWRWNAPAPVELTKDTLCPVGGPWAITVVLLDASDDIPPVTKAEIQT VLRDAARTIQKGELLELRALDPRTPGGRILFEKCNPGDGTDLSTLSANPDAAKRRWLSEFDRPLTETLAHLDASSSATSP LLATIQAIAVQRFGGAAARELRKRLIVVSDMIEHGPEYSQYKGDLSYGRFKKTATYKATHTNLNGASVDFYYIQRIKPIL DSGAHIQFWLDWIADSSGTLGVAKKLQGGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29544; Mature: 29413
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRNRRRRSTEIGKLVAAALLLLLCAIIVAGVAVWRWNAPAPVELTKDTLCPVGGPWAI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEECCCCCCCCCCCEEE TVVLLDASDDIPPVTKAEIQTVLRDAARTIQKGELLELRALDPRTPGGRILFEKCNPGDG EEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEECCCCCC TDLSTLSANPDAAKRRWLSEFDRPLTETLAHLDASSSATSPLLATIQAIAVQRFGGAAAR CCCCEECCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHH ELRKRLIVVSDMIEHGPEYSQYKGDLSYGRFKKTATYKATHTNLNGASVDFYYIQRIKPI HHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHCEEEEEEECCCCCCEEHHHHHHHHHHH LDSGAHIQFWLDWIADSSGTLGVAKKLQGGG HCCCCEEEEEEEEHHCCCCCHHHHHHCCCCC >Mature Secondary Structure SRRNRRRRSTEIGKLVAAALLLLLCAIIVAGVAVWRWNAPAPVELTKDTLCPVGGPWAI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEECCCCCCCCCCCEEE TVVLLDASDDIPPVTKAEIQTVLRDAARTIQKGELLELRALDPRTPGGRILFEKCNPGDG EEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEECCCCCC TDLSTLSANPDAAKRRWLSEFDRPLTETLAHLDASSSATSPLLATIQAIAVQRFGGAAAR CCCCEECCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHH ELRKRLIVVSDMIEHGPEYSQYKGDLSYGRFKKTATYKATHTNLNGASVDFYYIQRIKPI HHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHCEEEEEEECCCCCCEEHHHHHHHHHHH LDSGAHIQFWLDWIADSSGTLGVAKKLQGGG HCCCCEEEEEEEEHHCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA