Click here to switch to the map view.

The map label for this gene is 154246074

Identifier: 154246074

GI number: 154246074

Start: 2392346

End: 2393377

Strand: Direct

Name: 154246074

Synonym: Xaut_2131

Alternate gene names: NA

Gene position: 2392346-2393377 (Clockwise)

Preceding gene: 154246071

Following gene: 154246075

Centisome position: 45.06

GC content: 70.74

Gene sequence:

>1032_bases
ATGAGGCGCGTCGATGCCGTAACCGGGAACGCCGCCTTCATGTCCACCGCCCCGTCCAGCCTCACCAGCAAGGTTCAGCC
CCTCGCCTTCGATACCGGGATCTTCGCCCTCGCCTTTCTCGATGCGGCGGTGGCCTTCGTTGGCACGGAGGGCGTGGTGC
ATCTGGTGGGGGGCGAGCCGAAGGCGGTCAAGATCCACGACGGCGCTGTGCTCGACGCCGCCTCCGACGGCAAGCGCCTC
GTCACCGGCGGCGACGACGGGCAGGTGATGGAGACCCGTTCGGACGGCTCCACCCGCGTCCTCGCCGGCCAGAAGGGCCG
CTGGATCGACCGGGTGGCGCTGGGGCCGGACGGCGTCGTCGCCTGGTCCGCCGGCAAGACCGCCCATGTGCTGCCGGCGA
AGGGCGAGTCGAAAAGCCTCGACGTGCCCTCCACCGTGGGTGGCCTCGCCTTCGCCCCCAAGGGCCTGCGCCTCGCTGTG
GCCCATTATGGCGGCGTCACCCTGTGGTTTCCCAATGCCGCCGCCGCCAAGCCGGAGCTGTTCGGCTGGAAGGGTTCCCA
CCTCGGCGTTGTCTTCTCGCCGGACGGCCGCTTCCTGGTCACCACCATGCAGGAGCCGGCGCTCCACGGCTGGCGGGTGG
TGGACGGCGCGCACATGCGCATGACCGGCTATCCCTCGCGGGTGAAGTCGTTCGCCTTCACGGCGGACGGCAAGTGGCTC
GCCACCTCCGGCTCGGGCGAGGCCATCCTGTGGCCGTTCCAGGCCAAGGACGGCCCCATGGGCAAGGAGCCGTCCATGCT
CGCCCCGTCCCCCACCACCCGCGTCACCGTGGTGTCGCCCCATCCCAAGGATCCGGTGGTCGGCATCGGCTACGAGGACG
GGATGGTGATGATGGTGCGCATCACCGACGCCGCCGAGATCCTGCTGCGCGCCCCGGATTCCGATGCGGTGAGCGCCATG
GCCTGGCATCCCTCCGGCGGGGCGGTGGCCTTCGGCACGCAGGGCGGCAAGGGCGGCCTGCTGGCTTTCTGA

Upstream 100 bases:

>100_bases
ATAGGTCATGGAACCGGCGTGGCAAAGAGCCGTAGGGCAAACGCGGCCGGCCTCTCCGGCGCCTGCATCCAGCCTTGCGG
TCGGGCACGTTCGGTGCCTT

Downstream 100 bases:

>100_bases
ATCCGCAGGGCCGGAGCGGGAGCTCTTTTGAGGCCGCAGGGTGGTCGTGCTTGCAGCTTGACCCCTTCCAGCGCGGCGCG
CCCGGCTCTCGTCGCAGCCC

Product: WD-40 repeat-containing protein

Products: NA

Alternate protein names: WD-40 Repeat Protein; WD Repeat-Containing Protein; WD-40 Repeat-Containing G-Protein; WD-Repeat Family Protein; G- Repeat Protein; WD40 Domain-Containing Protein; Beta WD-40 Repeat-Containing G-Protein; WD40 Repeat Subgroup; Vegetatible Incompatibility; Wd-40 Repeat Protein

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MRRVDAVTGNAAFMSTAPSSLTSKVQPLAFDTGIFALAFLDAAVAFVGTEGVVHLVGGEPKAVKIHDGAVLDAASDGKRL
VTGGDDGQVMETRSDGSTRVLAGQKGRWIDRVALGPDGVVAWSAGKTAHVLPAKGESKSLDVPSTVGGLAFAPKGLRLAV
AHYGGVTLWFPNAAAAKPELFGWKGSHLGVVFSPDGRFLVTTMQEPALHGWRVVDGAHMRMTGYPSRVKSFAFTADGKWL
ATSGSGEAILWPFQAKDGPMGKEPSMLAPSPTTRVTVVSPHPKDPVVGIGYEDGMVMMVRITDAAEILLRAPDSDAVSAM
AWHPSGGAVAFGTQGGKGGLLAF

Sequences:

>Translated_343_residues
MRRVDAVTGNAAFMSTAPSSLTSKVQPLAFDTGIFALAFLDAAVAFVGTEGVVHLVGGEPKAVKIHDGAVLDAASDGKRL
VTGGDDGQVMETRSDGSTRVLAGQKGRWIDRVALGPDGVVAWSAGKTAHVLPAKGESKSLDVPSTVGGLAFAPKGLRLAV
AHYGGVTLWFPNAAAAKPELFGWKGSHLGVVFSPDGRFLVTTMQEPALHGWRVVDGAHMRMTGYPSRVKSFAFTADGKWL
ATSGSGEAILWPFQAKDGPMGKEPSMLAPSPTTRVTVVSPHPKDPVVGIGYEDGMVMMVRITDAAEILLRAPDSDAVSAM
AWHPSGGAVAFGTQGGKGGLLAF
>Mature_343_residues
MRRVDAVTGNAAFMSTAPSSLTSKVQPLAFDTGIFALAFLDAAVAFVGTEGVVHLVGGEPKAVKIHDGAVLDAASDGKRL
VTGGDDGQVMETRSDGSTRVLAGQKGRWIDRVALGPDGVVAWSAGKTAHVLPAKGESKSLDVPSTVGGLAFAPKGLRLAV
AHYGGVTLWFPNAAAAKPELFGWKGSHLGVVFSPDGRFLVTTMQEPALHGWRVVDGAHMRMTGYPSRVKSFAFTADGKWL
ATSGSGEAILWPFQAKDGPMGKEPSMLAPSPTTRVTVVSPHPKDPVVGIGYEDGMVMMVRITDAAEILLRAPDSDAVSAM
AWHPSGGAVAFGTQGGKGGLLAF

Specific function: Unknown

COG id: COG2319

COG function: function code R; FOG: WD40 repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35572; Mature: 35572

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: PS00277 STAPH_STREP_TOXIN_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRVDAVTGNAAFMSTAPSSLTSKVQPLAFDTGIFALAFLDAAVAFVGTEGVVHLVGGEP
CCCEEEECCCEEEEECCCHHHHHCCCCEEECHHHHHHHHHHHHHEEECCCCEEEEECCCC
KAVKIHDGAVLDAASDGKRLVTGGDDGQVMETRSDGSTRVLAGQKGRWIDRVALGPDGVV
CEEEEECCEEEECCCCCCEEEECCCCCCEEEECCCCCEEEEECCCCCEEEEEEECCCCEE
AWSAGKTAHVLPAKGESKSLDVPSTVGGLAFAPKGLRLAVAHYGGVTLWFPNAAAAKPEL
EECCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCEEEECCCCCCCCCCC
FGWKGSHLGVVFSPDGRFLVTTMQEPALHGWRVVDGAHMRMTGYPSRVKSFAFTADGKWL
CCCCCCEEEEEECCCCCEEEEECCCCCCCCEEEECCCEEEEECCHHHHHEEEEECCCCEE
ATSGSGEAILWPFQAKDGPMGKEPSMLAPSPTTRVTVVSPHPKDPVVGIGYEDGMVMMVR
EECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCEEEEEE
ITDAAEILLRAPDSDAVSAMAWHPSGGAVAFGTQGGKGGLLAF
ECCCEEEEEECCCCCCEEEEEECCCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure
MRRVDAVTGNAAFMSTAPSSLTSKVQPLAFDTGIFALAFLDAAVAFVGTEGVVHLVGGEP
CCCEEEECCCEEEEECCCHHHHHCCCCEEECHHHHHHHHHHHHHEEECCCCEEEEECCCC
KAVKIHDGAVLDAASDGKRLVTGGDDGQVMETRSDGSTRVLAGQKGRWIDRVALGPDGVV
CEEEEECCEEEECCCCCCEEEECCCCCCEEEECCCCCEEEEECCCCCEEEEEEECCCCEE
AWSAGKTAHVLPAKGESKSLDVPSTVGGLAFAPKGLRLAVAHYGGVTLWFPNAAAAKPEL
EECCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCEEEECCCCCCCCCCC
FGWKGSHLGVVFSPDGRFLVTTMQEPALHGWRVVDGAHMRMTGYPSRVKSFAFTADGKWL
CCCCCCEEEEEECCCCCEEEEECCCCCCCCEEEECCCEEEEECCHHHHHEEEEECCCCEE
ATSGSGEAILWPFQAKDGPMGKEPSMLAPSPTTRVTVVSPHPKDPVVGIGYEDGMVMMVR
EECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCEEEEEE
ITDAAEILLRAPDSDAVSAMAWHPSGGAVAFGTQGGKGGLLAF
ECCCEEEEEECCCCCCEEEEEECCCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA