Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154246058
Identifier: 154246058
GI number: 154246058
Start: 2374244
End: 2374816
Strand: Direct
Name: 154246058
Synonym: Xaut_2115
Alternate gene names: NA
Gene position: 2374244-2374816 (Clockwise)
Preceding gene: 154246057
Following gene: 154246059
Centisome position: 44.72
GC content: 73.82
Gene sequence:
>573_bases ATGAGCGTGCTGCCATCCGTCATCCCATCGCGCCGGCTGCCGCTGCTCGCGGCGCTGGGCTATCTGGCGCTTGTCCTGGT GCTGCTCGCGGTGACGGGGAGCGCCATCGGCGACCTGATGGACAAGCGCGCCGCCGTGGCCGAGGCGTCCGATGCGCTGG ACCGGCTGCAGGGACGCAAGCCTCCCCGTGCCGGCGACCCGGCGGAGCCGTGGGCCGGCGCGCCGGTGCTGGAAGGACCC ACGGTGACGGTGGCGGGCGCCGCGCTCATGCAGCGCATCGCCGCCGCCGTGGAGCGCGCGGGCGGGCGCATCACCTCGTC CCGGCCGGAGCTTCAGGGCACGCCCGCCGGGCCGGGCTTCGTCGCCGTGGCCGCGAGCCTCGACATCGGCGAGGATGCGC TGCAGAAGCTGCTCTACGACATCGAGGCAGGACAGCCGTTCCTGTTCGTGGACCAGCTGGCGATCCAGAGCGAGGCGACG ACCTCGGGCGCGCGGACGGTGGACGGGGGCGGCCAGCCCATGGCGCTGAAAGTGACCTTCACCGCCTACGGCCAGTGGCA GGGCGCGCGATGA
Upstream 100 bases:
>100_bases CCGAGGCCACTTTCGTGGCACCCACCACCCGCGCGCCCGGCGAGGCCGGCGAGCGCTTCCAGATCTCCGCGCGCGTCCTC CTGCCCATGGAGGCCCTGCG
Downstream 100 bases:
>100_bases TCGATTTTGCGCGGGCTTCGGGCTTTTCCCTGTTGGCGATGGTCCTCGTGGTGTCGGCCACGCCTGTGGGCGCCTCCGAG CTCGACGCGCCGATCCCGCC
Product: putative general secretion pathway protein M
Products: NA
Alternate protein names: General Secretion Pathway Protein M GspM
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MSVLPSVIPSRRLPLLAALGYLALVLVLLAVTGSAIGDLMDKRAAVAEASDALDRLQGRKPPRAGDPAEPWAGAPVLEGP TVTVAGAALMQRIAAAVERAGGRITSSRPELQGTPAGPGFVAVAASLDIGEDALQKLLYDIEAGQPFLFVDQLAIQSEAT TSGARTVDGGGQPMALKVTFTAYGQWQGAR
Sequences:
>Translated_190_residues MSVLPSVIPSRRLPLLAALGYLALVLVLLAVTGSAIGDLMDKRAAVAEASDALDRLQGRKPPRAGDPAEPWAGAPVLEGP TVTVAGAALMQRIAAAVERAGGRITSSRPELQGTPAGPGFVAVAASLDIGEDALQKLLYDIEAGQPFLFVDQLAIQSEAT TSGARTVDGGGQPMALKVTFTAYGQWQGAR >Mature_189_residues SVLPSVIPSRRLPLLAALGYLALVLVLLAVTGSAIGDLMDKRAAVAEASDALDRLQGRKPPRAGDPAEPWAGAPVLEGPT VTVAGAALMQRIAAAVERAGGRITSSRPELQGTPAGPGFVAVAASLDIGEDALQKLLYDIEAGQPFLFVDQLAIQSEATT SGARTVDGGGQPMALKVTFTAYGQWQGAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19513; Mature: 19381
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVLPSVIPSRRLPLLAALGYLALVLVLLAVTGSAIGDLMDKRAAVAEASDALDRLQGRK CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PPRAGDPAEPWAGAPVLEGPTVTVAGAALMQRIAAAVERAGGRITSSRPELQGTPAGPGF CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC VAVAASLDIGEDALQKLLYDIEAGQPFLFVDQLAIQSEATTSGARTVDGGGQPMALKVTF EEEEECCCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCCEEECCCCCCEEEEEEE TAYGQWQGAR EEECCCCCCC >Mature Secondary Structure SVLPSVIPSRRLPLLAALGYLALVLVLLAVTGSAIGDLMDKRAAVAEASDALDRLQGRK CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PPRAGDPAEPWAGAPVLEGPTVTVAGAALMQRIAAAVERAGGRITSSRPELQGTPAGPGF CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC VAVAASLDIGEDALQKLLYDIEAGQPFLFVDQLAIQSEATTSGARTVDGGGQPMALKVTF EEEEECCCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCCEEECCCCCCEEEEEEE TAYGQWQGAR EEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA