Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
---|---|
Accession | NC_009720 |
Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is 154246057
Identifier: 154246057
GI number: 154246057
Start: 2373168
End: 2374247
Strand: Direct
Name: 154246057
Synonym: Xaut_2114
Alternate gene names: NA
Gene position: 2373168-2374247 (Clockwise)
Preceding gene: 154246056
Following gene: 154246058
Centisome position: 44.7
GC content: 73.8
Gene sequence:
>1080_bases ATGACCCAGATGACGAAGCCATCTTCCTCTTCCGCCCTCTCGCTGGCGCGGTTCCTCGACGCCTTCTCCGCCTTCATCGA CCTTGCCGCCGGCTTCGTCGCCGACCTACGCGAGCAGCTCACGCGCGGGGCGGCGGTGCGTCTGGTGGAGAGGGAGGCGG GGGTGTTCACCCTGGCCCTGCCGGACGGGACGGCCCGCCTCCGGCTGGATGATCCCACCCCGTTTGCGCCGGAGATCGTG GCGGCGCTCAAGGGGCGGGAGGTGGAGCTGGCGCTCGATCCCGGCCGCTTCCTGTTCCGCCCACTGGAGCTGCCGCGCGG CGCCGCCGCGTTCCTCGACGGCATCGTGCGCTCGCAGATCGACCGCCTGACTCCCTGGAGCGCGAGTGAAGCGGCCTATG GCTTCACGGCGCCTGAGGACGCGCCCGACGAGCGCCTCGCCCTCACCGTGGCCGCCACCGCGCGGGCCCGCCTTTCGCCC CTCCTGGAGCGGCTGAAGGCACAGGGCGCGGGCGCCATCCTCGTCACCACGCAGGCGGAGGGCACGGGGTCGCCCATCCG CGTGCTCGATCATGCAGCATCCGGCGCGGTCTCGGGGATGGCCGGGGTGCGGCGTGTCCTGCTCGCGGTGCTCGGTGGCG CGGCGGCGGCGGCGCTGCTGGCGCTCGCCGTCTCCGGGCTGGTGGGTGGCAACCTCGATGCCGAACTGGACGACATCACC GAGCGCATCGGCGCCCAGCGCCGGGCGCTGGTGGCGGCGCGTGACGGGCAGGGCGGGACGGCCGTGCTCGCCGCCCTCGA ACGGCGCAAGCGCGAGGTGCCCGCCAGCGTGCTGGTGCTGGAGGCGCTGTCGCAGGCGCTGCCCGACGACACCTATGTCA CCGAGCTGCAGATGGAGGGCGACAGGGTGGAGGTGACGGGCGTCTCGCGGGAGGCGGCGGCGCTGATCCGCCTGCTGGAG CAGTCGCGCCAGTTCGCCGAGGCCACTTTCGTGGCACCCACCACCCGCGCGCCCGGCGAGGCCGGCGAGCGCTTCCAGAT CTCCGCGCGCGTCCTCCTGCCCATGGAGGCCCTGCGATGA
Upstream 100 bases:
>100_bases GCGACTTCGGCGATGACCCCTATCGGGTCTTGTCATGGCGCGAGGATGCCGACCTGCCGGCGGAGGCCCCGCCGCCGCGC CCGAAGGGGGAGCGCCGGCC
Downstream 100 bases:
>100_bases GCGTGCTGCCATCCGTCATCCCATCGCGCCGGCTGCCGCTGCTCGCGGCGCTGGGCTATCTGGCGCTTGTCCTGGTGCTG CTCGCGGTGACGGGGAGCGC
Product: fimbrial assembly family protein
Products: NA
Alternate protein names: General Secretion Pathway Protein L GspL; General Secretion Pathway Protein L; Fimbrial Assembly
Number of amino acids: Translated: 359; Mature: 358
Protein sequence:
>359_residues MTQMTKPSSSSALSLARFLDAFSAFIDLAAGFVADLREQLTRGAAVRLVEREAGVFTLALPDGTARLRLDDPTPFAPEIV AALKGREVELALDPGRFLFRPLELPRGAAAFLDGIVRSQIDRLTPWSASEAAYGFTAPEDAPDERLALTVAATARARLSP LLERLKAQGAGAILVTTQAEGTGSPIRVLDHAASGAVSGMAGVRRVLLAVLGGAAAAALLALAVSGLVGGNLDAELDDIT ERIGAQRRALVAARDGQGGTAVLAALERRKREVPASVLVLEALSQALPDDTYVTELQMEGDRVEVTGVSREAAALIRLLE QSRQFAEATFVAPTTRAPGEAGERFQISARVLLPMEALR
Sequences:
>Translated_359_residues MTQMTKPSSSSALSLARFLDAFSAFIDLAAGFVADLREQLTRGAAVRLVEREAGVFTLALPDGTARLRLDDPTPFAPEIV AALKGREVELALDPGRFLFRPLELPRGAAAFLDGIVRSQIDRLTPWSASEAAYGFTAPEDAPDERLALTVAATARARLSP LLERLKAQGAGAILVTTQAEGTGSPIRVLDHAASGAVSGMAGVRRVLLAVLGGAAAAALLALAVSGLVGGNLDAELDDIT ERIGAQRRALVAARDGQGGTAVLAALERRKREVPASVLVLEALSQALPDDTYVTELQMEGDRVEVTGVSREAAALIRLLE QSRQFAEATFVAPTTRAPGEAGERFQISARVLLPMEALR >Mature_358_residues TQMTKPSSSSALSLARFLDAFSAFIDLAAGFVADLREQLTRGAAVRLVEREAGVFTLALPDGTARLRLDDPTPFAPEIVA ALKGREVELALDPGRFLFRPLELPRGAAAFLDGIVRSQIDRLTPWSASEAAYGFTAPEDAPDERLALTVAATARARLSPL LERLKAQGAGAILVTTQAEGTGSPIRVLDHAASGAVSGMAGVRRVLLAVLGGAAAAALLALAVSGLVGGNLDAELDDITE RIGAQRRALVAARDGQGGTAVLAALERRKREVPASVLVLEALSQALPDDTYVTELQMEGDRVEVTGVSREAAALIRLLEQ SRQFAEATFVAPTTRAPGEAGERFQISARVLLPMEALR
Specific function: Unknown
COG id: COG3166
COG function: function code NU; Tfp pilus assembly protein PilN
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37750; Mature: 37618
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQMTKPSSSSALSLARFLDAFSAFIDLAAGFVADLREQLTRGAAVRLVEREAGVFTLAL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCEEEEEE PDGTARLRLDDPTPFAPEIVAALKGREVELALDPGRFLFRPLELPRGAAAFLDGIVRSQI CCCCEEEEECCCCCCHHHHHHHHCCCEEEEEECCCHHHEECCCCCCHHHHHHHHHHHHHH DRLTPWSASEAAYGFTAPEDAPDERLALTVAATARARLSPLLERLKAQGAGAILVTTQAE HHCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEEECC GTGSPIRVLDHAASGAVSGMAGVRRVLLAVLGGAAAAALLALAVSGLVGGNLDAELDDIT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH ERIGAQRRALVAARDGQGGTAVLAALERRKREVPASVLVLEALSQALPDDTYVTELQMEG HHHCCHHHEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEEECC DRVEVTGVSREAAALIRLLEQSRQFAEATFVAPTTRAPGEAGERFQISARVLLPMEALR CEEEEECCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCEEEEEEEEECCHHHCC >Mature Secondary Structure TQMTKPSSSSALSLARFLDAFSAFIDLAAGFVADLREQLTRGAAVRLVEREAGVFTLAL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCEEEEEE PDGTARLRLDDPTPFAPEIVAALKGREVELALDPGRFLFRPLELPRGAAAFLDGIVRSQI CCCCEEEEECCCCCCHHHHHHHHCCCEEEEEECCCHHHEECCCCCCHHHHHHHHHHHHHH DRLTPWSASEAAYGFTAPEDAPDERLALTVAATARARLSPLLERLKAQGAGAILVTTQAE HHCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEEECC GTGSPIRVLDHAASGAVSGMAGVRRVLLAVLGGAAAAALLALAVSGLVGGNLDAELDDIT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH ERIGAQRRALVAARDGQGGTAVLAALERRKREVPASVLVLEALSQALPDDTYVTELQMEG HHHCCHHHEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEEECC DRVEVTGVSREAAALIRLLEQSRQFAEATFVAPTTRAPGEAGERFQISARVLLPMEALR CEEEEECCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCEEEEEEEEECCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA