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The map label for this gene is ycbK [H]

Identifier: 154246010

GI number: 154246010

Start: 2323938

End: 2325446

Strand: Reverse

Name: ycbK [H]

Synonym: Xaut_2067

Alternate gene names: 154246010

Gene position: 2325446-2323938 (Counterclockwise)

Preceding gene: 154246011

Following gene: 154246008

Centisome position: 43.8

GC content: 70.51

Gene sequence:

>1509_bases
TTGGCCATACGTTCCGCGATCACTGCCGTCCGATCCCTGCGCGCAAAAACCTTGCGCATCAAGGGGCTGCCCGCGCTCCG
GGCCGTCGCCATCGGGTCGAGCCTTCTGATTGCCGGCACCTCCTCGCTGCAGAACGCGGTGGCCAACGGCGACACCCGCA
CCATCACCCTGCACCACACCCATTCCGGCGAGAGCGGCAGCTTCACCTTCAAGAAGAACGGCCGCTACGACGCCGAGGTG
CTGGCCCAGCTCAATCATTTCCTGCGGGACTGGCGCAACCAGAAGTCCACGCAGATGGATCCGGGCCTGTTCGACATCGT
GTGGGAGGTCTATCGCGAGACCGACGCCACGGCGCCGATCCAGATCGTCTCGTCCTACCGCTCGCCCGAGACCAATTCCA
TGCTGCGCGCGCGCTCCAGCGGCGTGGCGAAATTCTCCCAGCACATGCTGGGCCGGGCCATGGACTTCTACATTCCGGGC
GTGAACCTCACCGACCTGCGCGTCGCCGGCCTTCGGCTCCAGCGCGGCGGCGTGGGCTTCTATCCCACCTCCGGCTCGCC
CTTCGTCCACATGGACACCGGTAACGTGCGCCACTGGCCGCGCATGACCCACGACCAGCTCGCCCGCGTCTTCCCCGATG
GCAAGACCGTGCACGTGCCCACCGACGGGCGGCCCCTCTCCGGCTATAATACCGCCCTCGCCGAAATCCAGGCCCGAGGC
TCCAAGGCCGGCGTCACCGTGGCCTCGGCCGACAGTGGCAAGGGCGTGAAGAAGTTCTTCTCCGGCCTGTTCGGCAAGAA
GGATGCGGACGACGACGAGGGCGGCGAGACCACCACGGTCGCCGCCGCCGAAACCACAACCGAGGACGCCGCGCCCACCC
GCGCCAGCGGCAAGGGCGCTCCGGCCGCTGTCCAGGTGGCGACCGCGCCCGTGCCCCCGTCCCGCCCGGCCGAGATCGCC
GCAGGGGCGCTGGTGGCCGCCAATGCCAGCCTGTTCGCCCCCCTGCCCCAGCGCCGCCCGGCCGAAGCCGGCGGCCGCGA
CGCGCGGGTGGCGAGCCTGACCGCACCCGGCTCCAACGCCGGCTCGGTGCCACTGCCCGCCGTCATCACCCGCGGCGAGG
CGTCGGAAGAGGGTCCGGCCCTGGGCTATGCCTCGCCGGGCCCCTTGAGCGAGCAGCGCAGCACCCTCTCGGGCGGAATG
ATGCCCAACGCCGCCGCCCCCACCGTGGCCCATGCGCCGGCTTCCGCCGGAAAGCCGCGCGCCCGCGTCGCCGAGGTCAC
GTTCGGCCGGCTGTTCCTGTCGCCGAGCCTCTCCACGGAATTGTATCTGCGCACGCCGGAGCTGCGGCAGCTCGCCACCT
TCATGGCGCCGCCCCACGAAGTGGTGGCCTCCGCCTTCTCGCGGGATGGCTCGTTCGGCCTGAAATCCCGCTTTTCCGGC
ACGGCGGTGGCGGACCTGCCCACCTATGTGTTCCGCGCCCCGGCCATCGCCTACACCCAGCGCATGTGA

Upstream 100 bases:

>100_bases
GTGTCAACTCACCCTTAACCGAACCCGACAAGACTCTCATCCCATAGCGTCGCGGCAACAGTCGCGGCGTCCTTGACATC
TGAGCCTCGGGTTCGAGACA

Downstream 100 bases:

>100_bases
GCGCACCGGTCCATTCGGGCTAGCTTCTGCCTAAGCGGCGGCGTGACGCGGCGGGGCCGCCCCCGCCGCCCTAAACTTGC
CTAAACGAAGATGCCCAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 502; Mature: 501

Protein sequence:

>502_residues
MAIRSAITAVRSLRAKTLRIKGLPALRAVAIGSSLLIAGTSSLQNAVANGDTRTITLHHTHSGESGSFTFKKNGRYDAEV
LAQLNHFLRDWRNQKSTQMDPGLFDIVWEVYRETDATAPIQIVSSYRSPETNSMLRARSSGVAKFSQHMLGRAMDFYIPG
VNLTDLRVAGLRLQRGGVGFYPTSGSPFVHMDTGNVRHWPRMTHDQLARVFPDGKTVHVPTDGRPLSGYNTALAEIQARG
SKAGVTVASADSGKGVKKFFSGLFGKKDADDDEGGETTTVAAAETTTEDAAPTRASGKGAPAAVQVATAPVPPSRPAEIA
AGALVAANASLFAPLPQRRPAEAGGRDARVASLTAPGSNAGSVPLPAVITRGEASEEGPALGYASPGPLSEQRSTLSGGM
MPNAAAPTVAHAPASAGKPRARVAEVTFGRLFLSPSLSTELYLRTPELRQLATFMAPPHEVVASAFSRDGSFGLKSRFSG
TAVADLPTYVFRAPAIAYTQRM

Sequences:

>Translated_502_residues
MAIRSAITAVRSLRAKTLRIKGLPALRAVAIGSSLLIAGTSSLQNAVANGDTRTITLHHTHSGESGSFTFKKNGRYDAEV
LAQLNHFLRDWRNQKSTQMDPGLFDIVWEVYRETDATAPIQIVSSYRSPETNSMLRARSSGVAKFSQHMLGRAMDFYIPG
VNLTDLRVAGLRLQRGGVGFYPTSGSPFVHMDTGNVRHWPRMTHDQLARVFPDGKTVHVPTDGRPLSGYNTALAEIQARG
SKAGVTVASADSGKGVKKFFSGLFGKKDADDDEGGETTTVAAAETTTEDAAPTRASGKGAPAAVQVATAPVPPSRPAEIA
AGALVAANASLFAPLPQRRPAEAGGRDARVASLTAPGSNAGSVPLPAVITRGEASEEGPALGYASPGPLSEQRSTLSGGM
MPNAAAPTVAHAPASAGKPRARVAEVTFGRLFLSPSLSTELYLRTPELRQLATFMAPPHEVVASAFSRDGSFGLKSRFSG
TAVADLPTYVFRAPAIAYTQRM
>Mature_501_residues
AIRSAITAVRSLRAKTLRIKGLPALRAVAIGSSLLIAGTSSLQNAVANGDTRTITLHHTHSGESGSFTFKKNGRYDAEVL
AQLNHFLRDWRNQKSTQMDPGLFDIVWEVYRETDATAPIQIVSSYRSPETNSMLRARSSGVAKFSQHMLGRAMDFYIPGV
NLTDLRVAGLRLQRGGVGFYPTSGSPFVHMDTGNVRHWPRMTHDQLARVFPDGKTVHVPTDGRPLSGYNTALAEIQARGS
KAGVTVASADSGKGVKKFFSGLFGKKDADDDEGGETTTVAAAETTTEDAAPTRASGKGAPAAVQVATAPVPPSRPAEIAA
GALVAANASLFAPLPQRRPAEAGGRDARVASLTAPGSNAGSVPLPAVITRGEASEEGPALGYASPGPLSEQRSTLSGGMM
PNAAAPTVAHAPASAGKPRARVAEVTFGRLFLSPSLSTELYLRTPELRQLATFMAPPHEVVASAFSRDGSFGLKSRFSGT
AVADLPTYVFRAPAIAYTQRM

Specific function: Unknown

COG id: COG3108

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1666 [H]

Homologues:

Organism=Escherichia coli, GI1787157, Length=147, Percent_Identity=48.9795918367347, Blast_Score=145, Evalue=6e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010275
- InterPro:   IPR009045
- InterPro:   IPR006311 [H]

Pfam domain/function: PF05951 Peptidase_M15_2 [H]

EC number: NA

Molecular weight: Translated: 52860; Mature: 52729

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIRSAITAVRSLRAKTLRIKGLPALRAVAIGSSLLIAGTSSLQNAVANGDTRTITLHHT
CCHHHHHHHHHHHHHHEEEECCCCHHHHHHHCCEEEEECCHHHHHHHCCCCEEEEEEEEC
HSGESGSFTFKKNGRYDAEVLAQLNHFLRDWRNQKSTQMDPGLFDIVWEVYRETDATAPI
CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHH
QIVSSYRSPETNSMLRARSSGVAKFSQHMLGRAMDFYIPGVNLTDLRVAGLRLQRGGVGF
HHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHEEECCCCCCCEEEEEEEEECCCCEE
YPTSGSPFVHMDTGNVRHWPRMTHDQLARVFPDGKTVHVPTDGRPLSGYNTALAEIQARG
ECCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHCC
SKAGVTVASADSGKGVKKFFSGLFGKKDADDDEGGETTTVAAAETTTEDAAPTRASGKGA
CCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCC
PAAVQVATAPVPPSRPAEIAAGALVAANASLFAPLPQRRPAEAGGRDARVASLTAPGSNA
CCEEEEEECCCCCCCCHHHHHCCCEECCCHHCCCCCCCCCCCCCCCCCEEEEEECCCCCC
GSVPLPAVITRGEASEEGPALGYASPGPLSEQRSTLSGGMMPNAAAPTVAHAPASAGKPR
CCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCEECCCCCCCCCC
ARVAEVTFGRLFLSPSLSTELYLRTPELRQLATFMAPPHEVVASAFSRDGSFGLKSRFSG
CEEEHEEEEEEEECCCCCCEEEEECHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHCCCC
TAVADLPTYVFRAPAIAYTQRM
CCHHHHHHHHHHCCHHHHHCCC
>Mature Secondary Structure 
AIRSAITAVRSLRAKTLRIKGLPALRAVAIGSSLLIAGTSSLQNAVANGDTRTITLHHT
CHHHHHHHHHHHHHHEEEECCCCHHHHHHHCCEEEEECCHHHHHHHCCCCEEEEEEEEC
HSGESGSFTFKKNGRYDAEVLAQLNHFLRDWRNQKSTQMDPGLFDIVWEVYRETDATAPI
CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHH
QIVSSYRSPETNSMLRARSSGVAKFSQHMLGRAMDFYIPGVNLTDLRVAGLRLQRGGVGF
HHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHEEECCCCCCCEEEEEEEEECCCCEE
YPTSGSPFVHMDTGNVRHWPRMTHDQLARVFPDGKTVHVPTDGRPLSGYNTALAEIQARG
ECCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHCC
SKAGVTVASADSGKGVKKFFSGLFGKKDADDDEGGETTTVAAAETTTEDAAPTRASGKGA
CCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCC
PAAVQVATAPVPPSRPAEIAAGALVAANASLFAPLPQRRPAEAGGRDARVASLTAPGSNA
CCEEEEEECCCCCCCCHHHHHCCCEECCCHHCCCCCCCCCCCCCCCCCEEEEEECCCCCC
GSVPLPAVITRGEASEEGPALGYASPGPLSEQRSTLSGGMMPNAAAPTVAHAPASAGKPR
CCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCEECCCCCCCCCC
ARVAEVTFGRLFLSPSLSTELYLRTPELRQLATFMAPPHEVVASAFSRDGSFGLKSRFSG
CEEEHEEEEEEEECCCCCCEEEEECHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHCCCC
TAVADLPTYVFRAPAIAYTQRM
CCHHHHHHHHHHCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]