Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is obg
Identifier: 154245998
GI number: 154245998
Start: 2314070
End: 2315104
Strand: Direct
Name: obg
Synonym: Xaut_2055
Alternate gene names: 154245998
Gene position: 2314070-2315104 (Clockwise)
Preceding gene: 154245997
Following gene: 154245999
Centisome position: 43.59
GC content: 68.5
Gene sequence:
>1035_bases ATGAAATTCCTCGATCAGGCCAAGGTCTATGTGCGCTCCGGCGACGGGGGGGCGGGTTGCGTCTCCTTCCGGCGCGAGAA ATTCATCGAGTTCGGCGGTCCCGATGGCGGCGACGGCGGACGCGGCGGCGACGTGTGGATCGAGTGCGTGGATGGCCTCA ACACGCTCATCGACTATCGCTACCAGCAGCATTTCAAGGCCAAGAAGGGCGACCACGGCAAGGGCGCCAACCGCACCGGC GCCCGTGGCTCCGACGTGGTGCTGAGGGTGCCCGCCGGCACCCAGATCCTTGATGAGACGGAAGAGACGGTCCTTGCCGA CCTCACCGAGGTGGGCCAGCGCATCAAGCTCTTGGAAGGCGGCAACGGCGGCTTCGGCAACGCCCAGTTCAAGACCTCGA CCAACCAGGCCCCGCGCCGCGCCAATCCCGGCCTGGAAGGCCAGGAGCGGTGGATCTGGCTGCGCCTGAAGCTGATCGCC GACGCCGGCCTCGTGGGCCTGCCCAATGCCGGCAAGTCCACCTTCCTCGCCGCTACCACCGCGGCCAAGCCCAAGATCGC CGACTACCCCTTCACCACGCTGCATCCCGGCCTCGGGGTGGTGCGGGTGGACGGGCGCGAGTTCGTGCTCGCCGACATTC CCGGCCTCATCGAGGGCGCGCACGAGGGGGTGGGCATCGGCGACCGCTTCCTCGGCCATGTGGAGCGCTGCCGGGCGCTG CTGCATCTGGTGGACGGCACATCCGAGCACGCCGGCAAGGCCTACAAGACGGTGCGGGCCGAGCTTGCCGCCTATGGCAA CGGCCTCGACGAGAAACCGGAGATCGTGGCCCTGTCCAAGGTGGATGCGCTCTCCCCCGAGCTGCTCAAGCAGCAGAAGG AGCGCCTGAAGCGCGCCGCCAAGAAGACGCCGCTCTTGCTCTCGGCCCAGTCGGGGCAAGGGGTTCAGGAGGCGTTGCGC CTGCTGCTTTCCGTGGTGGAAGAGGAGCGCGGCGCCGAGAAGGCGGAGGAACCGCGGGACGCCTGGCGGCCCTGA
Upstream 100 bases:
>100_bases GTGCGCGCCAAGGTGTGCCACGCCAATGCCGAGCGCATCCTGAAGCTGTGAAGATGCGGCCGCCCTTGCGTTTGCGGCGC CTCCCGTCTACCTCCAAGCC
Downstream 100 bases:
>100_bases CGGGGTCGCGGCACCTCCCGGCGGGCTTGAACTTCGGCGACTCGATGGCCTATGCCGTCGCCGGGGCGCATGTCGCGCCG CTTCTCTTCAAGGGGGATGA
Product: GTP-binding protein Obg/CgtA
Products: NA
Alternate protein names: GTP-binding protein obg
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MKFLDQAKVYVRSGDGGAGCVSFRREKFIEFGGPDGGDGGRGGDVWIECVDGLNTLIDYRYQQHFKAKKGDHGKGANRTG ARGSDVVLRVPAGTQILDETEETVLADLTEVGQRIKLLEGGNGGFGNAQFKTSTNQAPRRANPGLEGQERWIWLRLKLIA DAGLVGLPNAGKSTFLAATTAAKPKIADYPFTTLHPGLGVVRVDGREFVLADIPGLIEGAHEGVGIGDRFLGHVERCRAL LHLVDGTSEHAGKAYKTVRAELAAYGNGLDEKPEIVALSKVDALSPELLKQQKERLKRAAKKTPLLLSAQSGQGVQEALR LLLSVVEEERGAEKAEEPRDAWRP
Sequences:
>Translated_344_residues MKFLDQAKVYVRSGDGGAGCVSFRREKFIEFGGPDGGDGGRGGDVWIECVDGLNTLIDYRYQQHFKAKKGDHGKGANRTG ARGSDVVLRVPAGTQILDETEETVLADLTEVGQRIKLLEGGNGGFGNAQFKTSTNQAPRRANPGLEGQERWIWLRLKLIA DAGLVGLPNAGKSTFLAATTAAKPKIADYPFTTLHPGLGVVRVDGREFVLADIPGLIEGAHEGVGIGDRFLGHVERCRAL LHLVDGTSEHAGKAYKTVRAELAAYGNGLDEKPEIVALSKVDALSPELLKQQKERLKRAAKKTPLLLSAQSGQGVQEALR LLLSVVEEERGAEKAEEPRDAWRP >Mature_344_residues MKFLDQAKVYVRSGDGGAGCVSFRREKFIEFGGPDGGDGGRGGDVWIECVDGLNTLIDYRYQQHFKAKKGDHGKGANRTG ARGSDVVLRVPAGTQILDETEETVLADLTEVGQRIKLLEGGNGGFGNAQFKTSTNQAPRRANPGLEGQERWIWLRLKLIA DAGLVGLPNAGKSTFLAATTAAKPKIADYPFTTLHPGLGVVRVDGREFVLADIPGLIEGAHEGVGIGDRFLGHVERCRAL LHLVDGTSEHAGKAYKTVRAELAAYGNGLDEKPEIVALSKVDALSPELLKQQKERLKRAAKKTPLLLSAQSGQGVQEALR LLLSVVEEERGAEKAEEPRDAWRP
Specific function: An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. It may play a role in control of the cell cycle, stress response, ribosome biogenesis and in t
COG id: COG0536
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain
Homologues:
Organism=Homo sapiens, GI24308117, Length=321, Percent_Identity=40.1869158878505, Blast_Score=171, Evalue=7e-43, Organism=Homo sapiens, GI111955139, Length=292, Percent_Identity=38.6986301369863, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI111955063, Length=126, Percent_Identity=45.2380952380952, Blast_Score=104, Evalue=1e-22, Organism=Homo sapiens, GI4758796, Length=123, Percent_Identity=35.7723577235772, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI58761500, Length=98, Percent_Identity=35.7142857142857, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI4557537, Length=117, Percent_Identity=34.1880341880342, Blast_Score=66, Evalue=5e-11, Organism=Escherichia coli, GI1789574, Length=346, Percent_Identity=47.6878612716763, Blast_Score=278, Evalue=4e-76, Organism=Escherichia coli, GI1787454, Length=102, Percent_Identity=39.2156862745098, Blast_Score=66, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17508313, Length=322, Percent_Identity=36.0248447204969, Blast_Score=145, Evalue=3e-35, Organism=Caenorhabditis elegans, GI17552324, Length=305, Percent_Identity=28.8524590163934, Blast_Score=109, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17509631, Length=99, Percent_Identity=37.3737373737374, Blast_Score=71, Evalue=9e-13, Organism=Caenorhabditis elegans, GI17555344, Length=114, Percent_Identity=35.9649122807018, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71981008, Length=114, Percent_Identity=35.0877192982456, Blast_Score=66, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6321962, Length=126, Percent_Identity=44.4444444444444, Blast_Score=103, Evalue=4e-23, Organism=Saccharomyces cerevisiae, GI6319281, Length=137, Percent_Identity=31.3868613138686, Blast_Score=70, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6321612, Length=113, Percent_Identity=36.283185840708, Blast_Score=67, Evalue=4e-12, Organism=Drosophila melanogaster, GI20129375, Length=322, Percent_Identity=36.0248447204969, Blast_Score=146, Evalue=2e-35, Organism=Drosophila melanogaster, GI24585318, Length=292, Percent_Identity=36.3013698630137, Blast_Score=142, Evalue=4e-34, Organism=Drosophila melanogaster, GI24640873, Length=99, Percent_Identity=35.3535353535354, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24640877, Length=99, Percent_Identity=35.3535353535354, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24640875, Length=99, Percent_Identity=35.3535353535354, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI17981711, Length=123, Percent_Identity=32.520325203252, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI21356473, Length=117, Percent_Identity=34.1880341880342, Blast_Score=65, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): OBG_XANP2 (A7IH06)
Other databases:
- EMBL: CP000781 - RefSeq: YP_001416956.1 - ProteinModelPortal: A7IH06 - SMR: A7IH06 - STRING: A7IH06 - GeneID: 5423044 - GenomeReviews: CP000781_GR - KEGG: xau:Xaut_2055 - eggNOG: COG0536 - HOGENOM: HBG716038 - OMA: ATCEHAG - ProtClustDB: PRK12299 - BioCyc: XAUT78245:XAUT_2055-MONOMER - GO: GO:0005737 - HAMAP: MF_01454 - InterPro: IPR014100 - InterPro: IPR006074 - InterPro: IPR006073 - InterPro: IPR006169 - InterPro: IPR002917 - InterPro: IPR005225 - Gene3D: G3DSA:2.70.210.12 - PANTHER: PTHR11702:SF3 - PIRSF: PIRSF002401 - PRINTS: PR00326 - TIGRFAMs: TIGR02729 - TIGRFAMs: TIGR00231
Pfam domain/function: PF01018 GTP1_OBG; PF01926 MMR_HSR1; SSF82051 GTP1_OBG_sub
EC number: NA
Molecular weight: Translated: 37065; Mature: 37065
Theoretical pI: Translated: 8.09; Mature: 8.09
Prosite motif: PS00905 GTP1_OBG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFLDQAKVYVRSGDGGAGCVSFRREKFIEFGGPDGGDGGRGGDVWIECVDGLNTLIDYR CCCHHCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH YQQHFKAKKGDHGKGANRTGARGSDVVLRVPAGTQILDETEETVLADLTEVGQRIKLLEG HHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEEEEC GNGGFGNAQFKTSTNQAPRRANPGLEGQERWIWLRLKLIADAGLVGLPNAGKSTFLAATT CCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEECCCCCCCEEEEEEC AAKPKIADYPFTTLHPGLGVVRVDGREFVLADIPGLIEGAHEGVGIGDRFLGHVERCRAL CCCCCCCCCCCCEECCCCCEEEECCCEEEEECCCHHHHCCCCCCCCHHHHHHHHHHHHHH LHLVDGTSEHAGKAYKTVRAELAAYGNGLDEKPEIVALSKVDALSPELLKQQKERLKRAA HHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHCCCCHHHHHHHHHHHHHHH KKTPLLLSAQSGQGVQEALRLLLSVVEEERGAEKAEEPRDAWRP HCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHCCCHHHCCC >Mature Secondary Structure MKFLDQAKVYVRSGDGGAGCVSFRREKFIEFGGPDGGDGGRGGDVWIECVDGLNTLIDYR CCCHHCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH YQQHFKAKKGDHGKGANRTGARGSDVVLRVPAGTQILDETEETVLADLTEVGQRIKLLEG HHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEEEEC GNGGFGNAQFKTSTNQAPRRANPGLEGQERWIWLRLKLIADAGLVGLPNAGKSTFLAATT CCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEECCCCCCCEEEEEEC AAKPKIADYPFTTLHPGLGVVRVDGREFVLADIPGLIEGAHEGVGIGDRFLGHVERCRAL CCCCCCCCCCCCEECCCCCEEEECCCEEEEECCCHHHHCCCCCCCCHHHHHHHHHHHHHH LHLVDGTSEHAGKAYKTVRAELAAYGNGLDEKPEIVALSKVDALSPELLKQQKERLKRAA HHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHCCCCHHHHHHHHHHHHHHH KKTPLLLSAQSGQGVQEALRLLLSVVEEERGAEKAEEPRDAWRP HCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA