Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154245997
Identifier: 154245997
GI number: 154245997
Start: 2313010
End: 2314020
Strand: Direct
Name: 154245997
Synonym: Xaut_2054
Alternate gene names: NA
Gene position: 2313010-2314020 (Clockwise)
Preceding gene: 154245993
Following gene: 154245998
Centisome position: 43.57
GC content: 67.95
Gene sequence:
>1011_bases GTGCGAGTGGCTGCTTCTGCAAGGGAACCCGCCGAGGGCTTGCCCGCCTCCGGTCCCATTCGCAAGATCGCCCTTGAAGA ACATTTCACCACGCCTGACCTCGCGAGCCGCAACGTCGCCCGGCCGACCCGCAGCGACGCGCTGTTCGCGGACATTGAGC GGCGGCTGGTGGATTTCGACAGCCTGCGGCTGGAGACCATGGACCGGGCCGGCATTTCGCTGTGCGTGCTGTCGGTCACC ACGCCCGGCGTGCAGGCCGAGAAGGACACGGCCACCGCCATCAGCCTTGCGCGCAAGGCCAATGACGCGCTCGCCGAGGA GGTGCGCCGCCAGCCCACGCGCTATGCCGGCTTCGCCCACCTGCCGATGCAGGACCCTACTGTGGCGGCGGACGAACTGG AGCGGTGTGTCCGCCAGCTCGGCTTCAAGGGCGCCCTCATCAACGGGCAGACCAACGGCCAGTATCTCGATGCCGACAGG TTTCTCCCGTTCTGGGAACGGGTGGCCGACCTCGACGTGCCGGTCTACCTCCATCCCGGAGAACTGGCGGATGCGCCGGC CATGTTCGCCGGCCGGCCGGAACTGGGCGGGGCGGTCTGGGCATGGACTGCGGAAACTGCAAGCCATGCCTTGCGGCTCG TCTTCGGTGGCACCTTCACGCGGTTCCCGACTTTGAAGGTCATTCTCGGTCACATGGGGGAGACACTGCCCTCCCTGCTG TGGCGCTTCGACAGCCGCTGGCAGTGCGCCCTGGGAGAGACGCTGCCGCCGGAGCAACTGCCGTCGGCCATCATACGGCG CCACTTCGCCATCACCACGTCCGGCGTTTGCGACCCGACCGCTTTGGCCGCCGCCATAGCGGCCCTGGGCGAGGACGCCG TGATGTTCTCGGTCGACTATCCCTATGAGGACACGTCCGCGGCAGCCGCCTTCATCGAGGCGGCGCCGCTGGATCCCGCC GTGCGCGCCAAGGTGTGCCACGCCAATGCCGAGCGCATCCTGAAGCTGTGA
Upstream 100 bases:
>100_bases CTTCGATGCGCGCCGAAGGCGCTTTCAGGAGCGGCATGCATTTCCATGGAACGCAGGCTTGAGGTGCAATAGCGTGGCGG TGGTTCATGTCCAATGGGAG
Downstream 100 bases:
>100_bases AGATGCGGCCGCCCTTGCGTTTGCGGCGCCTCCCGTCTACCTCCAAGCCATGAAATTCCTCGATCAGGCCAAGGTCTATG TGCGCTCCGGCGACGGGGGG
Product: amidohydrolase 2
Products: NA
Alternate protein names: Amidohydrolase; Amidohydrolase/Decarboxylase; Amidohydrolase Family Protein; 2-Amino-3-Carboxylmuconate-6-Semialdehyde Decarboxylase; O-Pyrocatechuate Decarboxylase; 2-Amino-3-Carboxymuconate-6-Semialdehyde Decarboxylase; 2-Amino-3-Carboxymuconate 6-Semialdehyde Decarboxylase; 4-Oxalomesaconate Hydratase; 2-Amino-3-Carboxymuconate-6- Semialdehyde Decarboxylase; Metal-Dependent Hydrolase; Tryptophan 2 3-Dioxygenase; Decarboxylase; Hydrolase; 2 3-Dihydroxybenzoic Acid Decarboxylase; Amidohydrolase Family; Amidase; 5-Carboxyvanillate Decarboxylase; Twin-Arginine Translocation Pathway Signal; Metal-Dependent Hydrolase Of TIM-Barrel Fold; Barh Protein; Amidohydrolase 2 Family Protein; Metal Dependent Hydrolase; 5-Carboxy-2-Hydroxymuconate-6-Semialdehyde Decarboxylase
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MRVAASAREPAEGLPASGPIRKIALEEHFTTPDLASRNVARPTRSDALFADIERRLVDFDSLRLETMDRAGISLCVLSVT TPGVQAEKDTATAISLARKANDALAEEVRRQPTRYAGFAHLPMQDPTVAADELERCVRQLGFKGALINGQTNGQYLDADR FLPFWERVADLDVPVYLHPGELADAPAMFAGRPELGGAVWAWTAETASHALRLVFGGTFTRFPTLKVILGHMGETLPSLL WRFDSRWQCALGETLPPEQLPSAIIRRHFAITTSGVCDPTALAAAIAALGEDAVMFSVDYPYEDTSAAAAFIEAAPLDPA VRAKVCHANAERILKL
Sequences:
>Translated_336_residues MRVAASAREPAEGLPASGPIRKIALEEHFTTPDLASRNVARPTRSDALFADIERRLVDFDSLRLETMDRAGISLCVLSVT TPGVQAEKDTATAISLARKANDALAEEVRRQPTRYAGFAHLPMQDPTVAADELERCVRQLGFKGALINGQTNGQYLDADR FLPFWERVADLDVPVYLHPGELADAPAMFAGRPELGGAVWAWTAETASHALRLVFGGTFTRFPTLKVILGHMGETLPSLL WRFDSRWQCALGETLPPEQLPSAIIRRHFAITTSGVCDPTALAAAIAALGEDAVMFSVDYPYEDTSAAAAFIEAAPLDPA VRAKVCHANAERILKL >Mature_336_residues MRVAASAREPAEGLPASGPIRKIALEEHFTTPDLASRNVARPTRSDALFADIERRLVDFDSLRLETMDRAGISLCVLSVT TPGVQAEKDTATAISLARKANDALAEEVRRQPTRYAGFAHLPMQDPTVAADELERCVRQLGFKGALINGQTNGQYLDADR FLPFWERVADLDVPVYLHPGELADAPAMFAGRPELGGAVWAWTAETASHALRLVFGGTFTRFPTLKVILGHMGETLPSLL WRFDSRWQCALGETLPPEQLPSAIIRRHFAITTSGVCDPTALAAAIAALGEDAVMFSVDYPYEDTSAAAAFIEAAPLDPA VRAKVCHANAERILKL
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI109715856, Length=273, Percent_Identity=27.1062271062271, Blast_Score=107, Evalue=2e-23, Organism=Caenorhabditis elegans, GI71995651, Length=317, Percent_Identity=25.2365930599369, Blast_Score=97, Evalue=9e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36474; Mature: 36474
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVAASAREPAEGLPASGPIRKIALEEHFTTPDLASRNVARPTRSDALFADIERRLVDFD CCCCCCCCCCCCCCCCCCCHHEEEHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH SLRLETMDRAGISLCVLSVTTPGVQAEKDTATAISLARKANDALAEEVRRQPTRYAGFAH HHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCEEE LPMQDPTVAADELERCVRQLGFKGALINGQTNGQYLDADRFLPFWERVADLDVPVYLHPG CCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCEECHHCCCHHHHHHHHCCCCEEECCC ELADAPAMFAGRPELGGAVWAWTAETASHALRLVFGGTFTRFPTLKVILGHMGETLPSLL CCCCCCCHHCCCCCCCCEEEEEEHHHHHHHEEHHCCCCHHHCHHHHHHHHHHHHHHHHHH WRFDSRWQCALGETLPPEQLPSAIIRRHFAITTSGVCDPTALAAAIAALGEDAVMFSVDY HHCCCCEEEECCCCCCHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHCCCCEEEEEEEC PYEDTSAAAAFIEAAPLDPAVRAKVCHANAERILKL CCCCHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHCC >Mature Secondary Structure MRVAASAREPAEGLPASGPIRKIALEEHFTTPDLASRNVARPTRSDALFADIERRLVDFD CCCCCCCCCCCCCCCCCCCHHEEEHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH SLRLETMDRAGISLCVLSVTTPGVQAEKDTATAISLARKANDALAEEVRRQPTRYAGFAH HHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCEEE LPMQDPTVAADELERCVRQLGFKGALINGQTNGQYLDADRFLPFWERVADLDVPVYLHPG CCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCEECHHCCCHHHHHHHHCCCCEEECCC ELADAPAMFAGRPELGGAVWAWTAETASHALRLVFGGTFTRFPTLKVILGHMGETLPSLL CCCCCCCHHCCCCCCCCEEEEEEHHHHHHHEEHHCCCCHHHCHHHHHHHHHHHHHHHHHH WRFDSRWQCALGETLPPEQLPSAIIRRHFAITTSGVCDPTALAAAIAALGEDAVMFSVDY HHCCCCEEEECCCCCCHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHCCCCEEEEEEEC PYEDTSAAAAFIEAAPLDPAVRAKVCHANAERILKL CCCCHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA