Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is yfeJ [H]
Identifier: 154245972
GI number: 154245972
Start: 2288726
End: 2289592
Strand: Direct
Name: yfeJ [H]
Synonym: Xaut_2029
Alternate gene names: 154245972
Gene position: 2288726-2289592 (Clockwise)
Preceding gene: 154245971
Following gene: 154245973
Centisome position: 43.11
GC content: 72.09
Gene sequence:
>867_bases GTGAGCAACCGGAATAGCTCTGGCGAAGGCTTTGGGCCGGGGGATCTGGACTCCTCACGTCCGGACCCGGTGGAAGGTGC GGGCGCGGATCGCGTCACGACCACGAGCGGAACGCCGAGCGCAACGCTTGCCGCCGGCACCGTGCTGGTGGTGCTGCATC AGGCCCGCTCCACCCCCGGCCGCATCGGCGAGCGCCTTGAGCGGCGCGGTTATGCCCTGGACGTGCGCCGCCCCGCCCTG GGTGATGCCCTGCCCGAACGCCTCGACGGCCATGACGGGGTGGTGGTGTTCGGCGGCCCCATGAGCGCCAACGACCCCAC CCCCTTCATCACCGAAGAGATCCGCCTGCTGGAGCGGGCGCTGGCCTCCGCCACCCCCAGCCTCGGGGTCTGCCTCGGCG CCCAGCTCATGGCCAAGGCCCTGGGCGCCCGCGTCGCCCCCCATGAGGAAGGGGCGTGCGAGATCGGCTACTACCCGCTG GAAGCCACAACGGCCGGCGCCGCGCTGATGCCGTGGCCGAGCCATGTCTACCATTGGCACTCGGAGGGCTTCGACCTGCC GGCGGGAGCAGACCTGCTCGCCACCGGCTCGGCCTTCCCCAACCAGGCGTTCCGCTATGGCGGCACCGCCTACGGCCTCC AGTTCCATCCCGAGGTGACGCGGGAGATGATGTGCGCCTGGACCGAGCGCGGCGCCCACCGCCTCACCAGCCCCGGCGCC CAGCCCCGCGAGGCGCACCTCGACGGCTGGGGGCGCTATGACGGCGCCGTGTGCCGCTGGCTTGATGCCTTCCTCGACGC GTTCCTGGGTCCTTGCCGTGGTTCGGGCATCGGGCCGGGCGGGCAAACCGAACCGAAGTCGGCCTGA
Upstream 100 bases:
>100_bases GAGGACAACCTCGTGTGGCGCGCGGCCGAGCTTCTGAACGTCGGCTCGCGCGATCGCATCCGCATCCGCCGCGAGGTCCG GGAGGAGACGGAAACTGGCG
Downstream 100 bases:
>100_bases ACCGTGCCGATGGTGACGAACCTCCCGATATGGCATTGATCCCCGCACGACTGTCATCGTCCTGCGGTATGGTGGTCTAG CGATGCTGTTTCCGCCGGCC
Product: glutamine amidotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MSNRNSSGEGFGPGDLDSSRPDPVEGAGADRVTTTSGTPSATLAAGTVLVVLHQARSTPGRIGERLERRGYALDVRRPAL GDALPERLDGHDGVVVFGGPMSANDPTPFITEEIRLLERALASATPSLGVCLGAQLMAKALGARVAPHEEGACEIGYYPL EATTAGAALMPWPSHVYHWHSEGFDLPAGADLLATGSAFPNQAFRYGGTAYGLQFHPEVTREMMCAWTERGAHRLTSPGA QPREAHLDGWGRYDGAVCRWLDAFLDAFLGPCRGSGIGPGGQTEPKSA
Sequences:
>Translated_288_residues MSNRNSSGEGFGPGDLDSSRPDPVEGAGADRVTTTSGTPSATLAAGTVLVVLHQARSTPGRIGERLERRGYALDVRRPAL GDALPERLDGHDGVVVFGGPMSANDPTPFITEEIRLLERALASATPSLGVCLGAQLMAKALGARVAPHEEGACEIGYYPL EATTAGAALMPWPSHVYHWHSEGFDLPAGADLLATGSAFPNQAFRYGGTAYGLQFHPEVTREMMCAWTERGAHRLTSPGA QPREAHLDGWGRYDGAVCRWLDAFLDAFLGPCRGSGIGPGGQTEPKSA >Mature_287_residues SNRNSSGEGFGPGDLDSSRPDPVEGAGADRVTTTSGTPSATLAAGTVLVVLHQARSTPGRIGERLERRGYALDVRRPALG DALPERLDGHDGVVVFGGPMSANDPTPFITEEIRLLERALASATPSLGVCLGAQLMAKALGARVAPHEEGACEIGYYPLE ATTAGAALMPWPSHVYHWHSEGFDLPAGADLLATGSAFPNQAFRYGGTAYGLQFHPEVTREMMCAWTERGAHRLTSPGAQ PREAHLDGWGRYDGAVCRWLDAFLDAFLGPCRGSGIGPGGQTEPKSA
Specific function: Unknown
COG id: COG0518
COG function: function code F; GMP synthase - Glutamine amidotransferase domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017926 - InterPro: IPR000991 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: NA
Molecular weight: Translated: 30319; Mature: 30188
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNRNSSGEGFGPGDLDSSRPDPVEGAGADRVTTTSGTPSATLAAGTVLVVLHQARSTPG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCHH RIGERLERRGYALDVRRPALGDALPERLDGHDGVVVFGGPMSANDPTPFITEEIRLLERA HHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHH LASATPSLGVCLGAQLMAKALGARVAPHEEGACEIGYYPLEATTAGAALMPWPSHVYHWH HHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECEEECCCCCCCCEECCCCHHHEEEC SEGFDLPAGADLLATGSAFPNQAFRYGGTAYGLQFHPEVTREMMCAWTERGAHRLTSPGA CCCCCCCCCCCCEECCCCCCCHHHHCCCEEECEEECHHHHHHHHHHHHHHCCHHHCCCCC QPREAHLDGWGRYDGAVCRWLDAFLDAFLGPCRGSGIGPGGQTEPKSA CCCHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SNRNSSGEGFGPGDLDSSRPDPVEGAGADRVTTTSGTPSATLAAGTVLVVLHQARSTPG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCHH RIGERLERRGYALDVRRPALGDALPERLDGHDGVVVFGGPMSANDPTPFITEEIRLLERA HHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHH LASATPSLGVCLGAQLMAKALGARVAPHEEGACEIGYYPLEATTAGAALMPWPSHVYHWH HHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECEEECCCCCCCCEECCCCHHHEEEC SEGFDLPAGADLLATGSAFPNQAFRYGGTAYGLQFHPEVTREMMCAWTERGAHRLTSPGA CCCCCCCCCCCCEECCCCCCCHHHHCCCEEECEEECHHHHHHHHHHHHHHCCHHHCCCCC QPREAHLDGWGRYDGAVCRWLDAFLDAFLGPCRGSGIGPGGQTEPKSA CCCHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7612925; 11677609 [H]