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The map label for this gene is phyR [H]

Identifier: 154245967

GI number: 154245967

Start: 2282795

End: 2283586

Strand: Direct

Name: phyR [H]

Synonym: Xaut_2024

Alternate gene names: 154245967

Gene position: 2282795-2283586 (Clockwise)

Preceding gene: 154245963

Following gene: 154245968

Centisome position: 43.0

GC content: 67.17

Gene sequence:

>792_bases
ATGGCATCGAACTCGCTCGTCAAGCAGCTACCGTTCCTGCGCCGCTATACGCGGGCGCTCGTGGGCTCGCAGGCGGCCGG
CGATCTCCTGGTGCAGAACACGCTCCAGGCCATCCTGGACCGCAAGGTGGCGGTGGATACCACCGTCTCGCCCCGGGTCG
CGCTCTACAAGGCATTCCACGAGGTGTGGAACCGCCAGCCGCAAGGCGGCTCCGTTCCCTCGCGCGCCGACCAGCGCCTC
CAGGCCATGGACCTGTCCTCCCGCGTGGCACTGCTTTTGACCGCCATGGAGGGGTTCTCCTTCGCCGAGACCGCCAACAT
CCTCGGCACGTCCCTCGACGAGGTGGAGGCGCAGGTGGTGGCGGCCCAGCGCGAGATCGACCGGCAGATCGCCACCCGCG
TCCTCATCATCGAGGACGAATGGGTGATCGCCCTCGACCTCAAGACCCTGGTGAGCGAGCTGGGCCACGAGGTCATCGGC
GTCGCCCCCACCCATGCCAAGGCGGTGGAGCTGGCCAAGGCCGGCAATTTTGGCCTGGTGCTGGCGGATATCCAGCTCGC
CGACGGTTCCTCGGGCATCGAGGCGGTGACCGAGATCCTGGAGAGCTTCAACGTGCCGGTGATCTTCATCACCGCCTTCC
CCGACCGCCTGCTCACCGGCGAGCGGCCGGAGCCGACCTATCTCATCACCAAGCCGTTCCTGACCGAGACGGTGAAGGCC
ACCATCGCCCAGGCCCTGTTCTTCCACGAGGCGAAGTCCGAGCCCGAGAGCCTCAAGGCCAAGACGGCCTGA

Upstream 100 bases:

>100_bases
GCTATCGCTTCAGCTTGCGGCCCGTGCTTCGGCAAAGTTCGCGCTTTGCCGGTCGGGTCGGCAAGTCGGATTGCAACACG
ACAGTTCCAAGGGATTTCGC

Downstream 100 bases:

>100_bases
TGAAGACCGACTGATCACAAGGCGGGTGCCGGCGGAACCATCGCGCCTCCCAGGTCGTCTCTACAGCGAAGGGCGAGGGC
CGGGTGACCGGCCCTCGCCC

Product: two-component response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MASNSLVKQLPFLRRYTRALVGSQAAGDLLVQNTLQAILDRKVAVDTTVSPRVALYKAFHEVWNRQPQGGSVPSRADQRL
QAMDLSSRVALLLTAMEGFSFAETANILGTSLDEVEAQVVAAQREIDRQIATRVLIIEDEWVIALDLKTLVSELGHEVIG
VAPTHAKAVELAKAGNFGLVLADIQLADGSSGIEAVTEILESFNVPVIFITAFPDRLLTGERPEPTYLITKPFLTETVKA
TIAQALFFHEAKSEPESLKAKTA

Sequences:

>Translated_263_residues
MASNSLVKQLPFLRRYTRALVGSQAAGDLLVQNTLQAILDRKVAVDTTVSPRVALYKAFHEVWNRQPQGGSVPSRADQRL
QAMDLSSRVALLLTAMEGFSFAETANILGTSLDEVEAQVVAAQREIDRQIATRVLIIEDEWVIALDLKTLVSELGHEVIG
VAPTHAKAVELAKAGNFGLVLADIQLADGSSGIEAVTEILESFNVPVIFITAFPDRLLTGERPEPTYLITKPFLTETVKA
TIAQALFFHEAKSEPESLKAKTA
>Mature_262_residues
ASNSLVKQLPFLRRYTRALVGSQAAGDLLVQNTLQAILDRKVAVDTTVSPRVALYKAFHEVWNRQPQGGSVPSRADQRLQ
AMDLSSRVALLLTAMEGFSFAETANILGTSLDEVEAQVVAAQREIDRQIATRVLIIEDEWVIALDLKTLVSELGHEVIGV
APTHAKAVELAKAGNFGLVLADIQLADGSSGIEAVTEILESFNVPVIFITAFPDRLLTGERPEPTYLITKPFLTETVKAT
IAQALFFHEAKSEPESLKAKTA

Specific function: Key regulator for adaptation to epiphytic life (leaf colonizing) of the bacterium. Positively regulates several genes including katE, sodA, hsp20, dps and gloA. However it is not known whether this regulation is direct or indirect. Also induces several de

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR014605
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 28590; Mature: 28459

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00059 ADH_ZINC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASNSLVKQLPFLRRYTRALVGSQAAGDLLVQNTLQAILDRKVAVDTTVSPRVALYKAFH
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHH
EVWNRQPQGGSVPSRADQRLQAMDLSSRVALLLTAMEGFSFAETANILGTSLDEVEAQVV
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHH
AAQREIDRQIATRVLIIEDEWVIALDLKTLVSELGHEVIGVAPTHAKAVELAKAGNFGLV
HHHHHHHHHHHHEEEEEECCEEEEEEHHHHHHHHCHHHEECCCCHHHHHHHHHCCCCEEE
LADIQLADGSSGIEAVTEILESFNVPVIFITAFPDRLLTGERPEPTYLITKPFLTETVKA
EEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHCCCCCCCCEEEECHHHHHHHHH
TIAQALFFHEAKSEPESLKAKTA
HHHHHHHHHHHCCCHHHHCCCCC
>Mature Secondary Structure 
ASNSLVKQLPFLRRYTRALVGSQAAGDLLVQNTLQAILDRKVAVDTTVSPRVALYKAFH
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHH
EVWNRQPQGGSVPSRADQRLQAMDLSSRVALLLTAMEGFSFAETANILGTSLDEVEAQVV
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHH
AAQREIDRQIATRVLIIEDEWVIALDLKTLVSELGHEVIGVAPTHAKAVELAKAGNFGLV
HHHHHHHHHHHHEEEEEECCEEEEEEHHHHHHHHCHHHEECCCCHHHHHHHHHCCCCEEE
LADIQLADGSSGIEAVTEILESFNVPVIFITAFPDRLLTGERPEPTYLITKPFLTETVKA
EEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHCCCCCCCCEEEECHHHHHHHHH
TIAQALFFHEAKSEPESLKAKTA
HHHHHHHHHHHCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA