Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
---|---|
Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is gloB [H]
Identifier: 154245962
GI number: 154245962
Start: 2277662
End: 2278510
Strand: Direct
Name: gloB [H]
Synonym: Xaut_2019
Alternate gene names: 154245962
Gene position: 2277662-2278510 (Clockwise)
Preceding gene: 154245960
Following gene: 154245963
Centisome position: 42.9
GC content: 70.2
Gene sequence:
>849_bases ATGCCGGCCGCGTCCGCAACCCATTCGGGCGCTGTGTCGAATGCCGTTCCGCTCGCGCTCCGGAGACCCGAGACCGTGCC AGCCGAAATCCGCCTCGTCCCCTGCCTCTCCGACAATTATGCCGTCCTGATCCACGATCCGGTCACCGAGGCGACCGCCG TGGTGGACGTGCCCGAGGCGACTCCCGTCATCGCGGCGCTGGAGAAGGAGGGCTGGAACCTCACCCACATCCTCGTCACC CATCACCACGCCGACCACACCCAGGGCATCCCGGCGGTGAAGGCGCGATTCGGCGCCACCGTGGTGGGGCCGAAATCCGA GGCCGACAAGATCCCCGGCCTCGACGTGACGGTGGTGGACGGCGATCCGGTGGCGGTGGGCTCGCTGGTAGGGCGGGTGC TGGAGACCCCCGGCCACACCGCCGGCCCCGCCACCTACCTGTTCGAGGGCGAGAAGCTGCTGTTCGCCGGCGATACCCTG TTCACCCTTGGCTGCGGCCGGCCGCTGGAATGCGAGCCGCCGGTGCTGTGGGACTCGCTGCAGCGCCTGCGTGCACTGCC CGAGGACCTTCAGGTCTACAGCGGCCACGAATACACCCTGGCCAATGCCCGCTTCGCCGCCACGGTGGACCCGGACAATC CCGCCCTCATCCGCCTTTATGGCGATGCGCAGCGCAAGCGGGACGCCGGCTCCCCCACCATTCCCTCGCGGCTGGGCGAC GAGGTGGCCGCCAACCCCTTCCTGCGCGCGGACGATCCCGGCATGGCGGAGCGTCTCGGCATGGCGGGGGCCGAGCCGGC CCTCGTCTTCACCGAGCTGCGGCTGCGCAAGAACGCCTTCAAGGGCTGA
Upstream 100 bases:
>100_bases GAAACATGGATCCCCTTCTCCCGGCCGCCACCGGTCTGCCGAACACGGGGTGTGCACACCCCGCCGGCCGCTCTTCCGCT CGGCGGCTTAATAGAGGATC
Downstream 100 bases:
>100_bases ACCGTGGCTGATGGGCTCAACGGGCTGACCGCCGAGGAGGTGGTCGCCCTCCTCCAGCTCCAGCCGCACCCGGAGGGCGG GCATTTCCGCGAGACCTTCC
Product: hydroxyacylglutathione hydrolase
Products: NA
Alternate protein names: Glyoxalase II; Glx II [H]
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MPAASATHSGAVSNAVPLALRRPETVPAEIRLVPCLSDNYAVLIHDPVTEATAVVDVPEATPVIAALEKEGWNLTHILVT HHHADHTQGIPAVKARFGATVVGPKSEADKIPGLDVTVVDGDPVAVGSLVGRVLETPGHTAGPATYLFEGEKLLFAGDTL FTLGCGRPLECEPPVLWDSLQRLRALPEDLQVYSGHEYTLANARFAATVDPDNPALIRLYGDAQRKRDAGSPTIPSRLGD EVAANPFLRADDPGMAERLGMAGAEPALVFTELRLRKNAFKG
Sequences:
>Translated_282_residues MPAASATHSGAVSNAVPLALRRPETVPAEIRLVPCLSDNYAVLIHDPVTEATAVVDVPEATPVIAALEKEGWNLTHILVT HHHADHTQGIPAVKARFGATVVGPKSEADKIPGLDVTVVDGDPVAVGSLVGRVLETPGHTAGPATYLFEGEKLLFAGDTL FTLGCGRPLECEPPVLWDSLQRLRALPEDLQVYSGHEYTLANARFAATVDPDNPALIRLYGDAQRKRDAGSPTIPSRLGD EVAANPFLRADDPGMAERLGMAGAEPALVFTELRLRKNAFKG >Mature_281_residues PAASATHSGAVSNAVPLALRRPETVPAEIRLVPCLSDNYAVLIHDPVTEATAVVDVPEATPVIAALEKEGWNLTHILVTH HHADHTQGIPAVKARFGATVVGPKSEADKIPGLDVTVVDGDPVAVGSLVGRVLETPGHTAGPATYLFEGEKLLFAGDTLF TLGCGRPLECEPPVLWDSLQRLRALPEDLQVYSGHEYTLANARFAATVDPDNPALIRLYGDAQRKRDAGSPTIPSRLGDE VAANPFLRADDPGMAERLGMAGAEPALVFTELRLRKNAFKG
Specific function: Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]
Homologues:
Organism=Homo sapiens, GI116642887, Length=234, Percent_Identity=40.5982905982906, Blast_Score=145, Evalue=3e-35, Organism=Homo sapiens, GI21703352, Length=234, Percent_Identity=40.5982905982906, Blast_Score=145, Evalue=4e-35, Organism=Homo sapiens, GI94538322, Length=272, Percent_Identity=35.6617647058824, Blast_Score=143, Evalue=2e-34, Organism=Homo sapiens, GI94538320, Length=260, Percent_Identity=35.7692307692308, Blast_Score=143, Evalue=2e-34, Organism=Homo sapiens, GI14150041, Length=232, Percent_Identity=35.7758620689655, Blast_Score=139, Evalue=3e-33, Organism=Homo sapiens, GI46361987, Length=191, Percent_Identity=35.6020942408377, Blast_Score=118, Evalue=7e-27, Organism=Homo sapiens, GI41327741, Length=186, Percent_Identity=27.9569892473118, Blast_Score=70, Evalue=1e-12, Organism=Escherichia coli, GI1786406, Length=251, Percent_Identity=34.2629482071713, Blast_Score=122, Evalue=2e-29, Organism=Escherichia coli, GI1787158, Length=157, Percent_Identity=27.3885350318471, Blast_Score=63, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17536925, Length=255, Percent_Identity=32.156862745098, Blast_Score=125, Evalue=2e-29, Organism=Caenorhabditis elegans, GI17538952, Length=178, Percent_Identity=34.2696629213483, Blast_Score=82, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6320478, Length=261, Percent_Identity=29.1187739463602, Blast_Score=87, Evalue=4e-18, Organism=Saccharomyces cerevisiae, GI6324614, Length=262, Percent_Identity=29.7709923664122, Blast_Score=84, Evalue=2e-17, Organism=Drosophila melanogaster, GI21356335, Length=259, Percent_Identity=36.2934362934363, Blast_Score=161, Evalue=5e-40, Organism=Drosophila melanogaster, GI24667711, Length=259, Percent_Identity=36.2934362934363, Blast_Score=161, Evalue=5e-40, Organism=Drosophila melanogaster, GI24667703, Length=259, Percent_Identity=36.2934362934363, Blast_Score=160, Evalue=8e-40, Organism=Drosophila melanogaster, GI221330176, Length=167, Percent_Identity=32.3353293413174, Blast_Score=79, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR017782 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: =3.1.2.6 [H]
Molecular weight: Translated: 29932; Mature: 29801
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAASATHSGAVSNAVPLALRRPETVPAEIRLVPCLSDNYAVLIHDPVTEATAVVDVPEA CCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEECCCCEEEEECCCCCCEEEEECCCC TPVIAALEKEGWNLTHILVTHHHADHTQGIPAVKARFGATVVGPKSEADKIPGLDVTVVD CCEEEEHHCCCCCEEEEEEEECCCCCCCCCCHHHHHCCEEEECCCCCHHCCCCCEEEEEC GDPVAVGSLVGRVLETPGHTAGPATYLFEGEKLLFAGDTLFTLGCGRPLECEPPVLWDSL CCCCHHHHHHHHHHHCCCCCCCCEEEEEECCEEEEECCEEEEECCCCCCCCCCCHHHHHH QRLRALPEDLQVYSGHEYTLANARFAATVDPDNPALIRLYGDAQRKRDAGSPTIPSRLGD HHHHCCCHHHHEECCCEEEEECCEEEEEECCCCCEEEEEECCHHHHHCCCCCCCCHHHCC EVAANPFLRADDPGMAERLGMAGAEPALVFTELRLRKNAFKG HHHCCCCEECCCCCHHHHHCCCCCCCCEEHHHHHHHHHCCCC >Mature Secondary Structure PAASATHSGAVSNAVPLALRRPETVPAEIRLVPCLSDNYAVLIHDPVTEATAVVDVPEA CCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEECCCCEEEEECCCCCCEEEEECCCC TPVIAALEKEGWNLTHILVTHHHADHTQGIPAVKARFGATVVGPKSEADKIPGLDVTVVD CCEEEEHHCCCCCEEEEEEEECCCCCCCCCCHHHHHCCEEEECCCCCHHCCCCCEEEEEC GDPVAVGSLVGRVLETPGHTAGPATYLFEGEKLLFAGDTLFTLGCGRPLECEPPVLWDSL CCCCHHHHHHHHHHHCCCCCCCCEEEEEECCEEEEECCEEEEECCCCCCCCCCCHHHHHH QRLRALPEDLQVYSGHEYTLANARFAATVDPDNPALIRLYGDAQRKRDAGSPTIPSRLGD HHHHCCCHHHHEECCCEEEEECCEEEEEECCCCCEEEEEECCHHHHHCCCCCCCCHHHCC EVAANPFLRADDPGMAERLGMAGAEPALVFTELRLRKNAFKG HHHCCCCEECCCCCHHHHHCCCCCCCCEEHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12597275 [H]