Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154244701
Identifier: 154244701
GI number: 154244701
Start: 836922
End: 837356
Strand: Reverse
Name: 154244701
Synonym: Xaut_0750
Alternate gene names: NA
Gene position: 837356-836922 (Counterclockwise)
Preceding gene: 154244702
Following gene: 154244700
Centisome position: 15.77
GC content: 65.06
Gene sequence:
>435_bases ATGACGAAAATTCGGAAGAAGCAGCGGCTCTCGGTCTATCTTGATCCGGACGTCACGAAGGCGCTGGCCGCCTATGCTGC GCGGCGCGACCAATCGAGATCTCTGGTCGCTGAAGCGGCCATCGCGTCGTTCCTGTCGCCGGATGCGGCCGAGCGCCAGG AAGCCGCGACCACCAAGCGATTGGACCAACTCGACCGGCGCATGACGCGCATGGAACGCGACCTCGGCATTTCGGTGGAA ATGCTGGCGGTGTTCGTTCGCTTCTGGCTCACCACCAATCCGCCATTACCTGAGCCAGCGCAGGCGGCCGCACGCGCGCA GGCGGGCGAGCGCTACGACGCGTTTGTCGCAGCACTGGGACGGCGACTCGCGAAGGGCCCGAAGGTGCGTGAGGAGATTT CCGAAGACGTCGCGGGGAACGCGGGCGCGGAATAA
Upstream 100 bases:
>100_bases ACGACACCGCCCGTGCGGGCCGGCTGAACCAGGTCATGCAGGGGGTCGCGCGGCAGGTCTCGCTCGACCCCAATGACGGC ATGGATCTCTGAGTGCACCG
Downstream 100 bases:
>100_bases TGGTCGCGCCGGACATCGCAAGAGTTTGTCAGTTCCGCCGTCGCCCTGTCTTTGTACGCCAGAGCCCTACCACCCCATTC TCCTTGTTGTCATGACCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: Helix-Turn-Helix Domain-Containing Protein; CopG Family Protein; Ribbon-Helix-Helix Harboring Protein; Helix-Turn-Helix Protein CopG Family; Helix-Turn-Helix Protein Of CopG Family; CopG-Family Protein; Regulator Protein
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MTKIRKKQRLSVYLDPDVTKALAAYAARRDQSRSLVAEAAIASFLSPDAAERQEAATTKRLDQLDRRMTRMERDLGISVE MLAVFVRFWLTTNPPLPEPAQAAARAQAGERYDAFVAALGRRLAKGPKVREEISEDVAGNAGAE
Sequences:
>Translated_144_residues MTKIRKKQRLSVYLDPDVTKALAAYAARRDQSRSLVAEAAIASFLSPDAAERQEAATTKRLDQLDRRMTRMERDLGISVE MLAVFVRFWLTTNPPLPEPAQAAARAQAGERYDAFVAALGRRLAKGPKVREEISEDVAGNAGAE >Mature_143_residues TKIRKKQRLSVYLDPDVTKALAAYAARRDQSRSLVAEAAIASFLSPDAAERQEAATTKRLDQLDRRMTRMERDLGISVEM LAVFVRFWLTTNPPLPEPAQAAARAQAGERYDAFVAALGRRLAKGPKVREEISEDVAGNAGAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15887; Mature: 15756
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKIRKKQRLSVYLDPDVTKALAAYAARRDQSRSLVAEAAIASFLSPDAAERQEAATTKR CCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LDQLDRRMTRMERDLGISVEMLAVFVRFWLTTNPPLPEPAQAAARAQAGERYDAFVAALG HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHH RRLAKGPKVREEISEDVAGNAGAE HHHHCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure TKIRKKQRLSVYLDPDVTKALAAYAARRDQSRSLVAEAAIASFLSPDAAERQEAATTKR CCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LDQLDRRMTRMERDLGISVEMLAVFVRFWLTTNPPLPEPAQAAARAQAGERYDAFVAALG HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHH RRLAKGPKVREEISEDVAGNAGAE HHHHCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA