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The map label for this gene is radC [C]

Identifier: 154244682

GI number: 154244682

Start: 818131

End: 818343

Strand: Reverse

Name: radC [C]

Synonym: Xaut_0731

Alternate gene names: 154244682

Gene position: 818343-818131 (Counterclockwise)

Preceding gene: 154244683

Following gene: 154244681

Centisome position: 15.41

GC content: 59.62

Gene sequence:

>213_bases
ATGCATAATTTTCTTAGCAATTTCAATCGTTTACGGATTTTCGATGGCATCGTGCACAATCACCCGGCCGGCGATCCCGA
GCCGTCAGCCGCCGATCTCGCGATGACAATGGAGATCCAGAAGGCGTGCGCGGCTCTGGGCATGACGCTGCATGACCACA
TCATCACCGGCGCCGGCCGGGAGACCAGCCTGCGCGCCCGAGGCGAGATCTGA

Upstream 100 bases:

>100_bases
GCGTCAAAGCGACTCAACACGGATGGCACGTGACGAGGCGTGACCATCACGATGCATCACACAAGACCGCCCCCAATTAC
AGCCTCTACACCTCCGCCAG

Downstream 100 bases:

>100_bases
TGGTCATGGGAATTGCGCCGGCGCGGGGCCCGGAGAGTGAAAGGAGGGATGGGGAGTTCGCGACGGGCTGGTTGCCGGAG
AGAGAGGCTCCCCGGCGTCC

Product: DNA repair protein RadC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 70; Mature: 70

Protein sequence:

>70_residues
MHNFLSNFNRLRIFDGIVHNHPAGDPEPSAADLAMTMEIQKACAALGMTLHDHIITGAGRETSLRARGEI

Sequences:

>Translated_70_residues
MHNFLSNFNRLRIFDGIVHNHPAGDPEPSAADLAMTMEIQKACAALGMTLHDHIITGAGRETSLRARGEI
>Mature_70_residues
MHNFLSNFNRLRIFDGIVHNHPAGDPEPSAADLAMTMEIQKACAALGMTLHDHIITGAGRETSLRARGEI

Specific function: Involved In DNA Repair. [C]

COG id: COG2003

COG function: function code L; DNA repair proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0758 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010994
- InterPro:   IPR001405
- InterPro:   IPR020891 [H]

Pfam domain/function: PF04002 DUF2466 [H]

EC number: NA

Molecular weight: Translated: 7640; Mature: 7640

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHNFLSNFNRLRIFDGIVHNHPAGDPEPSAADLAMTMEIQKACAALGMTLHDHIITGAGR
CCCHHCCCCEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHEECCCCC
ETSLRARGEI
CCCCCCCCCC
>Mature Secondary Structure
MHNFLSNFNRLRIFDGIVHNHPAGDPEPSAADLAMTMEIQKACAALGMTLHDHIITGAGR
CCCHHCCCCEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHEECCCCC
ETSLRARGEI
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10652786 [H]