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The map label for this gene is yubM [H]

Identifier: 154244681

GI number: 154244681

Start: 815878

End: 818082

Strand: Reverse

Name: yubM [H]

Synonym: Xaut_0730

Alternate gene names: 154244681

Gene position: 818082-815878 (Counterclockwise)

Preceding gene: 154244682

Following gene: 154244680

Centisome position: 15.41

GC content: 66.71

Gene sequence:

>2205_bases
ATGGGGAGTTCGCGACGGGCTGGTTGCCGGAGAGAGAGGCTCCCCGGCGTCCGTCATGGAGTGAAGATCATGGCTACTGC
CGTTCAGAAGATCACCCTGTCGTCCTCGCGCGACATTCCCTTCAACAAGCTGGTGCTCTCCCAGGCGAATGTCCGACGGG
TCAAGGCCGGTATTTCGGTTGAGGAACTGGCCGAGTCCATCGCCCGGCGCGGCCTGATCCAGTCGCTGCATGTCCGGCTG
GTGGTCGATGCCGAGGGCAAGGAAACCGGCATGTTCGAGGTGCCTGCCGGCGGCCGCCGCTACCGGGCGCTGGAACTGCT
GGTGAAGCAGAAGCGGCTCAACAAGACCGCCCCGGTGCCCTGTGTCGTGTCGGAGGCCGGCGCCGGCATCCTGATCGACG
AGGTGTCGCTTGCCGAAAATATCGAGCGCGCGCCGCTGCATCCGCTCGACCAGTTCCGCGCCTTTCAGGCCATGGGTGAG
AAGGGCATGACCGAGGAGGAAATCGCGGCGGCCTTCTTCGTCGACGTCAAGGTCGTGAAGCAGCGCCTGCGCCTGGCATC
GGTCTCTCCCGCGCTGCTCGACATCTATGCCGAGGACGGCATGACCCTCGAACAGCTCATGGCGTTCACCGTCTCGGAGG
ATCATGCGCGCCAGGAGCAGGTCTGGGAGGCGATCAAGGACGGCTGGCAGAAGGAGCCCTATTACATCCGTCGCCTGATG
ACCGAGACCACGGTCAGGGCCTCGGACAAGCGGGCGGCATTCGTCGGCATCGCGGCCTATGAAGAGGCTGGCGGCTACGT
CCTGCGCGATCTCTTCCAGTCCGACGATGGCGGCTGGCTCCAGGACGCCGTCCTGCTCGACCGTCTCGTCACCGAGAAGC
TCAAGGCCGAAGCCGAGACCGTCGCTGCCGAGGGCTGGAAATGGATCGAGATCGCCGTGACCTTTCCCTATGGTCATGAC
CACGGATTGCGGGAACTCGTCGGCGCCACGGTCGACCTGACCGAGGAGGAACGCGCGACCCGCGAAGCGCTGCGCGACGA
ATACGACCGGCTCGAGGCCGAATATGCCGAGGCTGACGAGCTTCCCGACGAGGTCGACCAGCGCCTCGGTGAGATCGAAG
AGGCGCTGGAGGCCTTCGATCACCGTCCCATGACCTATACCCCCGAGCAGATGGCCCGGGCCGGTGCCTTCGTCAGCATC
GACTCCGATGGAACGCTCCTGGTCGAGCGCGGCTATGTCCGGCCCGGGGACGAGGCGACGGCCGAGCCCGAGGGCGACGA
TGGCGCTGACGCTGCGGGCACTGCGACCGAGGGTGATCAGCTGGCCGGCGTCCAGCGCGCCGTGATTACGGTTGGCGGAT
CCCCCACCGAGGCAGACGAGGAGGAGGATGAGGTCGAGACAATCCGGCCGCTTCCCGACCGCCTGGTCAGCGAACTGACT
GCGCATCGTACGCTCGCCTTGCGCGATGCCGTGGCGATGAACCCCCATGTCGCCATGACCGCGCTTTTGCACCGGCTGGT
CACGGACAGTTTCCTCCCGCATTCCACGCGGGGTTGCATCGAGGCTCAGGTCCGCGATGTGCATTTCCCGGCGCAGGCCG
AGGATCTGCGCGACAGCGCCTCGGCGCGGGCGGTGGCCGAACGGCACGAACGCTGGGGCGATCATATCCCCGCAGATGAC
GCGGCGCTCTGGGACTGGCTGGCCGATCTCGACGACGACTCCCGCATGGAGCTTCTCGCCCATTGCGTGAGCTTCGGCGT
CAACGCGCTCTACGAGAAGCCGAACCCCTATGGCGGCATGGGAGTCAGCCAGCACGGTCTTGAGGTGCGGCTGGCGCAGG
CCGACCGGCTGGCGCGAGCAACCGGGCTCGACATGGTGGCCGTGGGCTGGCGGCCGACGGTCGCGAACTATCTCGGCCGC
GTGACCAAGCCGCGCATTCTCGAAGCTGTGCGCGAGGGGGCGGGCGAACGGGCGGCCGAGCTTATCGACCACCTGAAGAA
GGGCGACATGGCGAAGGAGGCCGAGCGCCTGCTCGCGGAAACCGGCTGGCTGCCCGAGCCGCTGCGCATGATCGACCCCG
GCACGGAGACCGACGCTATGGCCTCCGCCGATGTCGAGGCCGACGACCTGCCGGAGTTCCTGGCAGGCGATAGCGAGGAT
GAAGACCTCGCCGAGGAGGAGGAGCACATGGTCGCCGATGAATGA

Upstream 100 bases:

>100_bases
CATCACCGGCGCCGGCCGGGAGACCAGCCTGCGCGCCCGAGGCGAGATCTGATGGTCATGGGAATTGCGCCGGCGCGGGG
CCCGGAGAGTGAAAGGAGGG

Downstream 100 bases:

>100_bases
CCTCCGCCTGCGGGGTCGGCTTCGGCCGCCCCGCATCTTCCCTCTCGATTTTCCATCCGCCCGGCCACCGCGCCGGGCGC
ATTCGCTTCAGGAGCTACCG

Product: nuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 734; Mature: 733

Protein sequence:

>734_residues
MGSSRRAGCRRERLPGVRHGVKIMATAVQKITLSSSRDIPFNKLVLSQANVRRVKAGISVEELAESIARRGLIQSLHVRL
VVDAEGKETGMFEVPAGGRRYRALELLVKQKRLNKTAPVPCVVSEAGAGILIDEVSLAENIERAPLHPLDQFRAFQAMGE
KGMTEEEIAAAFFVDVKVVKQRLRLASVSPALLDIYAEDGMTLEQLMAFTVSEDHARQEQVWEAIKDGWQKEPYYIRRLM
TETTVRASDKRAAFVGIAAYEEAGGYVLRDLFQSDDGGWLQDAVLLDRLVTEKLKAEAETVAAEGWKWIEIAVTFPYGHD
HGLRELVGATVDLTEEERATREALRDEYDRLEAEYAEADELPDEVDQRLGEIEEALEAFDHRPMTYTPEQMARAGAFVSI
DSDGTLLVERGYVRPGDEATAEPEGDDGADAAGTATEGDQLAGVQRAVITVGGSPTEADEEEDEVETIRPLPDRLVSELT
AHRTLALRDAVAMNPHVAMTALLHRLVTDSFLPHSTRGCIEAQVRDVHFPAQAEDLRDSASARAVAERHERWGDHIPADD
AALWDWLADLDDDSRMELLAHCVSFGVNALYEKPNPYGGMGVSQHGLEVRLAQADRLARATGLDMVAVGWRPTVANYLGR
VTKPRILEAVREGAGERAAELIDHLKKGDMAKEAERLLAETGWLPEPLRMIDPGTETDAMASADVEADDLPEFLAGDSED
EDLAEEEEHMVADE

Sequences:

>Translated_734_residues
MGSSRRAGCRRERLPGVRHGVKIMATAVQKITLSSSRDIPFNKLVLSQANVRRVKAGISVEELAESIARRGLIQSLHVRL
VVDAEGKETGMFEVPAGGRRYRALELLVKQKRLNKTAPVPCVVSEAGAGILIDEVSLAENIERAPLHPLDQFRAFQAMGE
KGMTEEEIAAAFFVDVKVVKQRLRLASVSPALLDIYAEDGMTLEQLMAFTVSEDHARQEQVWEAIKDGWQKEPYYIRRLM
TETTVRASDKRAAFVGIAAYEEAGGYVLRDLFQSDDGGWLQDAVLLDRLVTEKLKAEAETVAAEGWKWIEIAVTFPYGHD
HGLRELVGATVDLTEEERATREALRDEYDRLEAEYAEADELPDEVDQRLGEIEEALEAFDHRPMTYTPEQMARAGAFVSI
DSDGTLLVERGYVRPGDEATAEPEGDDGADAAGTATEGDQLAGVQRAVITVGGSPTEADEEEDEVETIRPLPDRLVSELT
AHRTLALRDAVAMNPHVAMTALLHRLVTDSFLPHSTRGCIEAQVRDVHFPAQAEDLRDSASARAVAERHERWGDHIPADD
AALWDWLADLDDDSRMELLAHCVSFGVNALYEKPNPYGGMGVSQHGLEVRLAQADRLARATGLDMVAVGWRPTVANYLGR
VTKPRILEAVREGAGERAAELIDHLKKGDMAKEAERLLAETGWLPEPLRMIDPGTETDAMASADVEADDLPEFLAGDSED
EDLAEEEEHMVADE
>Mature_733_residues
GSSRRAGCRRERLPGVRHGVKIMATAVQKITLSSSRDIPFNKLVLSQANVRRVKAGISVEELAESIARRGLIQSLHVRLV
VDAEGKETGMFEVPAGGRRYRALELLVKQKRLNKTAPVPCVVSEAGAGILIDEVSLAENIERAPLHPLDQFRAFQAMGEK
GMTEEEIAAAFFVDVKVVKQRLRLASVSPALLDIYAEDGMTLEQLMAFTVSEDHARQEQVWEAIKDGWQKEPYYIRRLMT
ETTVRASDKRAAFVGIAAYEEAGGYVLRDLFQSDDGGWLQDAVLLDRLVTEKLKAEAETVAAEGWKWIEIAVTFPYGHDH
GLRELVGATVDLTEEERATREALRDEYDRLEAEYAEADELPDEVDQRLGEIEEALEAFDHRPMTYTPEQMARAGAFVSID
SDGTLLVERGYVRPGDEATAEPEGDDGADAAGTATEGDQLAGVQRAVITVGGSPTEADEEEDEVETIRPLPDRLVSELTA
HRTLALRDAVAMNPHVAMTALLHRLVTDSFLPHSTRGCIEAQVRDVHFPAQAEDLRDSASARAVAERHERWGDHIPADDA
ALWDWLADLDDDSRMELLAHCVSFGVNALYEKPNPYGGMGVSQHGLEVRLAQADRLARATGLDMVAVGWRPTVANYLGRV
TKPRILEAVREGAGERAAELIDHLKKGDMAKEAERLLAETGWLPEPLRMIDPGTETDAMASADVEADDLPEFLAGDSEDE
DLAEEEEHMVADE

Specific function: Unknown

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115 [H]

Pfam domain/function: PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 80919; Mature: 80787

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSSRRAGCRRERLPGVRHGVKIMATAVQKITLSSSRDIPFNKLVLSQANVRRVKAGISV
CCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCH
EELAESIARRGLIQSLHVRLVVDAEGKETGMFEVPAGGRRYRALELLVKQKRLNKTAPVP
HHHHHHHHHHHHHHEEEEEEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCC
CVVSEAGAGILIDEVSLAENIERAPLHPLDQFRAFQAMGEKGMTEEEIAAAFFVDVKVVK
EEEECCCCEEEEECHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
QRLRLASVSPALLDIYAEDGMTLEQLMAFTVSEDHARQEQVWEAIKDGWQKEPYYIRRLM
HHHHHHCCCHHHHHEECCCCCCHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHH
TETTVRASDKRAAFVGIAAYEEAGGYVLRDLFQSDDGGWLQDAVLLDRLVTEKLKAEAET
HHHHHCCCCCCEEEEEEEHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
VAAEGWKWIEIAVTFPYGHDHGLRELVGATVDLTEEERATREALRDEYDRLEAEYAEADE
HHHCCCEEEEEEEEECCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
LPDEVDQRLGEIEEALEAFDHRPMTYTPEQMARAGAFVSIDSDGTLLVERGYVRPGDEAT
CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEECCCCEEEEECCCCCCCCCCC
AEPEGDDGADAAGTATEGDQLAGVQRAVITVGGSPTEADEEEDEVETIRPLPDRLVSELT
CCCCCCCCCCCCCCCCCCHHHHHHEEEEEEECCCCCCCCCCHHHHHHHCCCHHHHHHHHH
AHRTLALRDAVAMNPHVAMTALLHRLVTDSFLPHSTRGCIEAQVRDVHFPAQAEDLRDSA
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHH
SARAVAERHERWGDHIPADDAALWDWLADLDDDSRMELLAHCVSFGVNALYEKPNPYGGM
HHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHCCCCCCCCC
GVSQHGLEVRLAQADRLARATGLDMVAVGWRPTVANYLGRVTKPRILEAVREGAGERAAE
CCCCCCCEEEEHHHHHHHHHCCCCEEEECCCHHHHHHHCCCCCHHHHHHHHHCCCHHHHH
LIDHLKKGDMAKEAERLLAETGWLPEPLRMIDPGTETDAMASADVEADDLPEFLAGDSED
HHHHHHCCCHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCHHCCCCCHHCCHHHHCCCCCC
EDLAEEEEHMVADE
HHHHHHHHHHCCCC
>Mature Secondary Structure 
GSSRRAGCRRERLPGVRHGVKIMATAVQKITLSSSRDIPFNKLVLSQANVRRVKAGISV
CCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCH
EELAESIARRGLIQSLHVRLVVDAEGKETGMFEVPAGGRRYRALELLVKQKRLNKTAPVP
HHHHHHHHHHHHHHEEEEEEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCC
CVVSEAGAGILIDEVSLAENIERAPLHPLDQFRAFQAMGEKGMTEEEIAAAFFVDVKVVK
EEEECCCCEEEEECHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
QRLRLASVSPALLDIYAEDGMTLEQLMAFTVSEDHARQEQVWEAIKDGWQKEPYYIRRLM
HHHHHHCCCHHHHHEECCCCCCHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHH
TETTVRASDKRAAFVGIAAYEEAGGYVLRDLFQSDDGGWLQDAVLLDRLVTEKLKAEAET
HHHHHCCCCCCEEEEEEEHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
VAAEGWKWIEIAVTFPYGHDHGLRELVGATVDLTEEERATREALRDEYDRLEAEYAEADE
HHHCCCEEEEEEEEECCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
LPDEVDQRLGEIEEALEAFDHRPMTYTPEQMARAGAFVSIDSDGTLLVERGYVRPGDEAT
CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEECCCCEEEEECCCCCCCCCCC
AEPEGDDGADAAGTATEGDQLAGVQRAVITVGGSPTEADEEEDEVETIRPLPDRLVSELT
CCCCCCCCCCCCCCCCCCHHHHHHEEEEEEECCCCCCCCCCHHHHHHHCCCHHHHHHHHH
AHRTLALRDAVAMNPHVAMTALLHRLVTDSFLPHSTRGCIEAQVRDVHFPAQAEDLRDSA
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHH
SARAVAERHERWGDHIPADDAALWDWLADLDDDSRMELLAHCVSFGVNALYEKPNPYGGM
HHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHCCCCCCCCC
GVSQHGLEVRLAQADRLARATGLDMVAVGWRPTVANYLGRVTKPRILEAVREGAGERAAE
CCCCCCCEEEEHHHHHHHHHCCCCEEEECCCHHHHHHHCCCCCHHHHHHHHHCCCHHHHH
LIDHLKKGDMAKEAERLLAETGWLPEPLRMIDPGTETDAMASADVEADDLPEFLAGDSED
HHHHHHCCCHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCHHCCCCCHHCCHHHHCCCCCC
EDLAEEEEHMVADE
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9722640; 9628576 [H]