| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is fdoG [H]
Identifier: 154244613
GI number: 154244613
Start: 743996
End: 746434
Strand: Reverse
Name: fdoG [H]
Synonym: Xaut_0662
Alternate gene names: 154244613
Gene position: 746434-743996 (Counterclockwise)
Preceding gene: 154244614
Following gene: 154244612
Centisome position: 14.06
GC content: 63.02
Gene sequence:
>2439_bases ATGACCAACTCCTGGACGGACATCAAGAATACCGATCTCGTGGTGATCATGGGCGGCAATGCCGCTGAAGCGCACCCGTG CGGATTCAAATGGGTCACGGAGGCGAAGGCCAACCGTGGCGCCAAGCTCGTCGTCGTGGACCCGCGCTTCACCCGCTCGG CCGCGGTGGCGGACTATTACGCCCCGATCCGGCAAGGCACCGACATCGCCTTCCTTCTGGGCGTCATCAACTACTGCATC AAGAACGACAAGATTCAGTGGGACTATGTGAAGGCGTTCACCAACGCCGGCTATATCGTCAAGGAAGGGTTCGGCTACCA GGACGGCCTGTTCACCGGCTATGACGAGATGAAGCGGGACTACAACCGCTCGTCCTGGGACTACGAGATCGGCGCCGACG GCTATGCGGTCGTGGACGATACCTTGCAGAACCCCCGCTGCGTCTGGAATCTGCTGAAGCAGCACGTCTCCGTCTACACG CCGGAGATGGTCGAGCGCATCACGGGCACGCCCAAGGACAAGTTCCTGAAGGTGGCGTCCATGATCGCGGAGTGTTCGTC GCCCACCAAGACGATGACCTCCATGTACGCGCTCGGCTGGACCCAGCATTCGAAGGGCTCGCAGAACATCCGCTGCATGG CGATGCTCCAGCTCATCCTCGGCAACATCGGTGTGCGCGGCGGCGGCATGAACGCCCTGCGCGGGCATTCCAACATCCAG GGCCTCACCGACATCGGCCTGATGTCCAACCTGATCCCGGGGTATCTCACGATCCCCACGGAGAAGGAGCCGGACCTCAA CGCCTACATGTCGACGCGTGGGTTCAAGCCGCTGCGTCCGGGCCAGATGAGCTACTGGCAGAACTACAGGAAGTTCTTCG TCTCGTTCCAGAAGTCCATGTGGGGTCAATCGGCGACGGCCGAGAACAACTGGGCGTTCGACTACCTGCCCAAGCTCGAC GTGCCGTCCTACGACGTGCTGCGTGCGTTCGAGCTGATGAAGCAGGGGAAGATGAACGTCTACTTCTGCCAGGGCTTCAA CCCGCTGCAGGCCTTCCCCAACAAGGCCAAGCTGGCGGAGGCGCTCGCCAAGCTCAAGCTGCTCGTGGTCATGGATCCCC TGGAGACCGAGACCGCCCGCTTCTGGGAGAACCACGGCGTCTACAATCCCGCCGATCCGTCGAAGATCTCGACGGAAGTC ATCCAGCTGCCCACCACCTGCTTCGCCGAGGACAACGGCTCGCTGGTGAATTCGGGCCGTTGGCTGCAATGGCACTGGGC GGCCGGCTCGCCTCCCGGCGAGGCGAAGACGGACATCTTCATCATGGCGCAGCTCCATCTGCGGCTGAAGGAGATGTACA AGAAGGAAGGTGGCGCCTTCCCCGATCCGATCGTCAACCTCACCTGGAACTACAAGGATCCGCACGATCCCGCGCCCGAG GAGCTGGCCAAGGAGATGAACGGGTACGTCATCTCCGACGTGCTCGATCCCAACGATCCGACCAAGAAGGTGCTGGAGGC GGGCAAGCAGCTCGCGAGCTTCGGCCTCCTGCGTGATGACGGCTCGACGGCGGCCGGCTGCTGGATCTATACCGGCAGCT ATACCGAGGCCGGCAACATGATGGCCCGCCGGGACAATTCCGATCCAGACGATACCGGCGCCTACCTCAAGTGGGCGTTC GCCTGGCCGGCCAACCGGCGCATCATCTACAACCGTGCCTCCTGCAACATCGACGGCCAGCCGTGGGACGACACCCGCAA GCTGATCTGGTGGGACGGGGCCAAGTGGACGGGCTACGACGTGCCCGACATCGCCCCCACCGCCAAGCCGCAGGATGTGG GCCCCTTCATCATGAACCCCGAAGGCGTTTCCCGCCTGTTCACCCGGGGCATGATGCGGGACGGGCCGTTCCCGGTGCAC TACGAGCCGTTCGAGAGCCCGGTCGCCAACCTGATCGCCCCCAAAGTACGGGGCAATCCGGTGGCGCGCGTGTTCAAGGA CGACTTCGCCCAGTTCGCCGACACGGCGTCCAAGGAGTTCCCGTATGCGGCGACCTCCTACCGCCTGACCGAGCATTTCC ACTACTGGACCAAGAACAACCACGTGAACTCGGTGCTCCAGCCCGAATTCTTCGTGGAAATCTCCGAGGAACTGGCAAAG GAGAAAAACATCGCCAATGCCGGCTGGGTCCGGGTGTGGTCGAAGCGCGGCTCCGTCTTCGCCAAGGCCTATGTCACCAA GCGCATCCGCCCGCTGATGGTGGACGGCAAGCCGGTGCATGTGGTGGGCATTCCCATCCACTGGGGCTTCGTGGGGGCGG CGAAGAAGGGCTTCCCGGCCAACGTGCTCACCCCGTTCGTGGGTGACGCGAACATCGAGACGCCGGAGTTCAAGGCGTTC CTCGTCAACATCGAGCCCTCCACCGGGCCGGTGGCGTAA
Upstream 100 bases:
>100_bases GGTGGTGCGCTCGACCGGAATTCTGGCGTTCGACAACCAGGCACGCGTCTGACACGGCCCGACGGTGGCGAGTCTCGCCC CAACTTTTGGCCGTGGAGCA
Downstream 100 bases:
>100_bases GGAGAAGGAGAACCAGCATGTTTCCTCCGATCCCCAACCCTCCGGTCACCCCCACCCCGGCGAAGTTCGGTGACAGCGAC CTCGTCCGGCGCTCGGCCTC
Product: formate dehydrogenase subunit alpha
Products: NA
Alternate protein names: Aerobic formate dehydrogenase major subunit; FDH-Z subunit alpha; Formate dehydrogenase-O subunit alpha [H]
Number of amino acids: Translated: 812; Mature: 811
Protein sequence:
>812_residues MTNSWTDIKNTDLVVIMGGNAAEAHPCGFKWVTEAKANRGAKLVVVDPRFTRSAAVADYYAPIRQGTDIAFLLGVINYCI KNDKIQWDYVKAFTNAGYIVKEGFGYQDGLFTGYDEMKRDYNRSSWDYEIGADGYAVVDDTLQNPRCVWNLLKQHVSVYT PEMVERITGTPKDKFLKVASMIAECSSPTKTMTSMYALGWTQHSKGSQNIRCMAMLQLILGNIGVRGGGMNALRGHSNIQ GLTDIGLMSNLIPGYLTIPTEKEPDLNAYMSTRGFKPLRPGQMSYWQNYRKFFVSFQKSMWGQSATAENNWAFDYLPKLD VPSYDVLRAFELMKQGKMNVYFCQGFNPLQAFPNKAKLAEALAKLKLLVVMDPLETETARFWENHGVYNPADPSKISTEV IQLPTTCFAEDNGSLVNSGRWLQWHWAAGSPPGEAKTDIFIMAQLHLRLKEMYKKEGGAFPDPIVNLTWNYKDPHDPAPE ELAKEMNGYVISDVLDPNDPTKKVLEAGKQLASFGLLRDDGSTAAGCWIYTGSYTEAGNMMARRDNSDPDDTGAYLKWAF AWPANRRIIYNRASCNIDGQPWDDTRKLIWWDGAKWTGYDVPDIAPTAKPQDVGPFIMNPEGVSRLFTRGMMRDGPFPVH YEPFESPVANLIAPKVRGNPVARVFKDDFAQFADTASKEFPYAATSYRLTEHFHYWTKNNHVNSVLQPEFFVEISEELAK EKNIANAGWVRVWSKRGSVFAKAYVTKRIRPLMVDGKPVHVVGIPIHWGFVGAAKKGFPANVLTPFVGDANIETPEFKAF LVNIEPSTGPVA
Sequences:
>Translated_812_residues MTNSWTDIKNTDLVVIMGGNAAEAHPCGFKWVTEAKANRGAKLVVVDPRFTRSAAVADYYAPIRQGTDIAFLLGVINYCI KNDKIQWDYVKAFTNAGYIVKEGFGYQDGLFTGYDEMKRDYNRSSWDYEIGADGYAVVDDTLQNPRCVWNLLKQHVSVYT PEMVERITGTPKDKFLKVASMIAECSSPTKTMTSMYALGWTQHSKGSQNIRCMAMLQLILGNIGVRGGGMNALRGHSNIQ GLTDIGLMSNLIPGYLTIPTEKEPDLNAYMSTRGFKPLRPGQMSYWQNYRKFFVSFQKSMWGQSATAENNWAFDYLPKLD VPSYDVLRAFELMKQGKMNVYFCQGFNPLQAFPNKAKLAEALAKLKLLVVMDPLETETARFWENHGVYNPADPSKISTEV IQLPTTCFAEDNGSLVNSGRWLQWHWAAGSPPGEAKTDIFIMAQLHLRLKEMYKKEGGAFPDPIVNLTWNYKDPHDPAPE ELAKEMNGYVISDVLDPNDPTKKVLEAGKQLASFGLLRDDGSTAAGCWIYTGSYTEAGNMMARRDNSDPDDTGAYLKWAF AWPANRRIIYNRASCNIDGQPWDDTRKLIWWDGAKWTGYDVPDIAPTAKPQDVGPFIMNPEGVSRLFTRGMMRDGPFPVH YEPFESPVANLIAPKVRGNPVARVFKDDFAQFADTASKEFPYAATSYRLTEHFHYWTKNNHVNSVLQPEFFVEISEELAK EKNIANAGWVRVWSKRGSVFAKAYVTKRIRPLMVDGKPVHVVGIPIHWGFVGAAKKGFPANVLTPFVGDANIETPEFKAF LVNIEPSTGPVA >Mature_811_residues TNSWTDIKNTDLVVIMGGNAAEAHPCGFKWVTEAKANRGAKLVVVDPRFTRSAAVADYYAPIRQGTDIAFLLGVINYCIK NDKIQWDYVKAFTNAGYIVKEGFGYQDGLFTGYDEMKRDYNRSSWDYEIGADGYAVVDDTLQNPRCVWNLLKQHVSVYTP EMVERITGTPKDKFLKVASMIAECSSPTKTMTSMYALGWTQHSKGSQNIRCMAMLQLILGNIGVRGGGMNALRGHSNIQG LTDIGLMSNLIPGYLTIPTEKEPDLNAYMSTRGFKPLRPGQMSYWQNYRKFFVSFQKSMWGQSATAENNWAFDYLPKLDV PSYDVLRAFELMKQGKMNVYFCQGFNPLQAFPNKAKLAEALAKLKLLVVMDPLETETARFWENHGVYNPADPSKISTEVI QLPTTCFAEDNGSLVNSGRWLQWHWAAGSPPGEAKTDIFIMAQLHLRLKEMYKKEGGAFPDPIVNLTWNYKDPHDPAPEE LAKEMNGYVISDVLDPNDPTKKVLEAGKQLASFGLLRDDGSTAAGCWIYTGSYTEAGNMMARRDNSDPDDTGAYLKWAFA WPANRRIIYNRASCNIDGQPWDDTRKLIWWDGAKWTGYDVPDIAPTAKPQDVGPFIMNPEGVSRLFTRGMMRDGPFPVHY EPFESPVANLIAPKVRGNPVARVFKDDFAQFADTASKEFPYAATSYRLTEHFHYWTKNNHVNSVLQPEFFVEISEELAKE KNIANAGWVRVWSKRGSVFAKAYVTKRIRPLMVDGKPVHVVGIPIHWGFVGAAKKGFPANVLTPFVGDANIETPEFKAFL VNIEPSTGPVA
Specific function: Allows to use formate as major electron donor during aerobic respiration. Subunit alpha possibly forms the active site [H]
COG id: COG0243
COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI3868720, Length=806, Percent_Identity=60.0496277915633, Blast_Score=1028, Evalue=0.0, Organism=Escherichia coli, GI3868719, Length=806, Percent_Identity=57.0719602977667, Blast_Score=984, Evalue=0.0, Organism=Escherichia coli, GI3868721, Length=450, Percent_Identity=26, Blast_Score=124, Evalue=3e-29, Organism=Escherichia coli, GI1788534, Length=456, Percent_Identity=23.6842105263158, Blast_Score=95, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR006443 - InterPro: IPR006657 - InterPro: IPR006656 - InterPro: IPR006963 - InterPro: IPR006655 - InterPro: IPR006311 [H]
Pfam domain/function: PF04879 Molybdop_Fe4S4; PF00384 Molybdopterin; PF01568 Molydop_binding [H]
EC number: =1.2.1.2 [H]
Molecular weight: Translated: 91112; Mature: 90980
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNSWTDIKNTDLVVIMGGNAAEAHPCGFKWVTEAKANRGAKLVVVDPRFTRSAAVADYY CCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEHHHCCCCCEEEEECCCCCCHHHHHHHH APIRQGTDIAFLLGVINYCIKNDKIQWDYVKAFTNAGYIVKEGFGYQDGLFTGYDEMKRD HHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHH YNRSSWDYEIGADGYAVVDDTLQNPRCVWNLLKQHVSVYTPEMVERITGTPKDKFLKVAS CCCCCCCEEECCCCEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHH MIAECSSPTKTMTSMYALGWTQHSKGSQNIRCMAMLQLILGNIGVRGGGMNALRGHSNIQ HHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCC GLTDIGLMSNLIPGYLTIPTEKEPDLNAYMSTRGFKPLRPGQMSYWQNYRKFFVSFQKSM CHHHHHHHHHCCCCEEECCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH WGQSATAENNWAFDYLPKLDVPSYDVLRAFELMKQGKMNVYFCQGFNPLQAFPNKAKLAE CCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHCCCHHHHHH ALAKLKLLVVMDPLETETARFWENHGVYNPADPSKISTEVIQLPTTCFAEDNGSLVNSGR HHHHEEEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEECCCCCEECCCC WLQWHWAAGSPPGEAKTDIFIMAQLHLRLKEMYKKEGGAFPDPIVNLTWNYKDPHDPAPE EEEEEECCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHH ELAKEMNGYVISDVLDPNDPTKKVLEAGKQLASFGLLRDDGSTAAGCWIYTGSYTEAGNM HHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHCCEECCCCCCEEEEEEECCCCCCCCC MARRDNSDPDDTGAYLKWAFAWPANRRIIYNRASCNIDGQPWDDTRKLIWWDGAKWTGYD CEECCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCC VPDIAPTAKPQDVGPFIMNPEGVSRLFTRGMMRDGPFPVHYEPFESPVANLIAPKVRGNP CCCCCCCCCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCH VARVFKDDFAQFADTASKEFPYAATSYRLTEHFHYWTKNNHVNSVLQPEFFVEISEELAK HHHHHHHHHHHHHHHHCCCCCCCHHHEEHHHHEEEECCCCCCCCCCCCHHHHHHHHHHHH EKNIANAGWVRVWSKRGSVFAKAYVTKRIRPLMVDGKPVHVVGIPIHWGFVGAAKKGFPA HCCCCCCCCEEEECCCCCEEHHHHHHHCCCEEEECCCEEEEEEEEEEECEECCCCCCCCC NVLTPFVGDANIETPEFKAFLVNIEPSTGPVA HHCCCCCCCCCCCCCCEEEEEEEECCCCCCCC >Mature Secondary Structure TNSWTDIKNTDLVVIMGGNAAEAHPCGFKWVTEAKANRGAKLVVVDPRFTRSAAVADYY CCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEHHHCCCCCEEEEECCCCCCHHHHHHHH APIRQGTDIAFLLGVINYCIKNDKIQWDYVKAFTNAGYIVKEGFGYQDGLFTGYDEMKRD HHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHH YNRSSWDYEIGADGYAVVDDTLQNPRCVWNLLKQHVSVYTPEMVERITGTPKDKFLKVAS CCCCCCCEEECCCCEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHH MIAECSSPTKTMTSMYALGWTQHSKGSQNIRCMAMLQLILGNIGVRGGGMNALRGHSNIQ HHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCC GLTDIGLMSNLIPGYLTIPTEKEPDLNAYMSTRGFKPLRPGQMSYWQNYRKFFVSFQKSM CHHHHHHHHHCCCCEEECCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH WGQSATAENNWAFDYLPKLDVPSYDVLRAFELMKQGKMNVYFCQGFNPLQAFPNKAKLAE CCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHCCCHHHHHH ALAKLKLLVVMDPLETETARFWENHGVYNPADPSKISTEVIQLPTTCFAEDNGSLVNSGR HHHHEEEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEECCCCCEECCCC WLQWHWAAGSPPGEAKTDIFIMAQLHLRLKEMYKKEGGAFPDPIVNLTWNYKDPHDPAPE EEEEEECCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHH ELAKEMNGYVISDVLDPNDPTKKVLEAGKQLASFGLLRDDGSTAAGCWIYTGSYTEAGNM HHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHCCEECCCCCCEEEEEEECCCCCCCCC MARRDNSDPDDTGAYLKWAFAWPANRRIIYNRASCNIDGQPWDDTRKLIWWDGAKWTGYD CEECCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCC VPDIAPTAKPQDVGPFIMNPEGVSRLFTRGMMRDGPFPVHYEPFESPVANLIAPKVRGNP CCCCCCCCCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCH VARVFKDDFAQFADTASKEFPYAATSYRLTEHFHYWTKNNHVNSVLQPEFFVEISEELAK HHHHHHHHHHHHHHHHCCCCCCCHHHEEHHHHEEEECCCCCCCCCCCCHHHHHHHHHHHH EKNIANAGWVRVWSKRGSVFAKAYVTKRIRPLMVDGKPVHVVGIPIHWGFVGAAKKGFPA HCCCCCCCCEEEECCCCCEEHHHHHHHCCCEEEECCCEEEEEEEEEEECEECCCCCCCCC NVLTPFVGDANIETPEFKAFLVNIEPSTGPVA HHCCCCCCCCCCCCCCEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8346018; 9278503; 8522521 [H]