Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154244476
Identifier: 154244476
GI number: 154244476
Start: 584651
End: 586021
Strand: Reverse
Name: 154244476
Synonym: Xaut_0519
Alternate gene names: NA
Gene position: 586021-584651 (Counterclockwise)
Preceding gene: 154244478
Following gene: 154244475
Centisome position: 11.04
GC content: 67.76
Gene sequence:
>1371_bases ATGAGTTCCAACACTTCCTTCTTCGGCGACCTCCTGACCTCCATCGCGGAGCGCGGGCGCTCGCTGCTCGACCGGTCGAG CCGGGTGTCCGGCGCAACCAAGGCGGCGACCCTGGTGGAGCGCTGCGAGCAGCTTCTCTCCGGCCGGGGCGAGGCCTCCG GCGTGGCTTTGGCCTCCGACATCCTCGACCGCTACGCCCGCATGAAGACCGGCGAGCGCATCGCCTTCTTCGAAGCGCTG GCGGAGACCTTCGGGCCGGACCGGGCGCGGCTCGAAAAAGCCATCGAGAGCTATGGCCGCACCGGCTCCGACGCGGCGGC GGCGGAAATCCACCTTGCCAGCGAGCCGCGCCGGCAGGAGCTGTTCCGCCGGTTCAACCTCGGGCCCGGCGCCACCCTCT CCCTCGTGCGCATGCGCGAGAATCTGATGGACGCCCTGGTCCATCGCCGCGATCTTGCCACCGTGGACCGGGATTTCGGA CACCTCTTCTCGTCCTGGTTCAACCGGGGGTTTCTCGTGCTGCGCCGCATCGACTGGTCGACGCCCGCCAACGTGCTGGA AAAGATCATCCGCTACGAGGCGGTGCATGCCATCCGCGACTGGAACGACCTGCGCGCCCGCGTGGATACGCCGGACCGGC GCTGCTACGCCTTCTTCCACCCCGCCCTGGTGGACGAGCCACTGATCTTCGTGGAAGTGGCGCTGATGAAGGACATTCCC GGCGGCATCGCCCCGGTGCTGGACCAATCGCGCGAGCATCTGGAGCCGGAGAAGGCCACCACCGCGGTCTTCTATTCCAT CTCCAACTGCCAGCGTGGGCTCGGCGGCGTTTCCTTCGGCAACTTCCTGATCAAGCAGGTGGTGGAGGAGATTTCCCGCG AAATCCCCTCGCTCTCCACCTTTGTCACGCTCTCCCCCGTGCCCGGCTTCCGCGCCTGGCTAGACGCCGAGCGCAAGGCG GAGAACTCCCCTGCCCTCACCGCCCTCGACCGAGAGGCGTTGGCGGCGCTCGATACCCCGGACTGGGCCGAGAAGCCGGA GACCCGCGAGGCGCTGGTGCCTGTGCTCTCGGCGGCGGCTGCCTATTATTTCCTTGTCGCCCGCACCACCAAGGGCAAGC CGGTGGACCCGGTGGCCCGCTTCCACCTCGGCAATGGCGCGCGGCTGGAGCGCATCAATCCCATGGGCGACCTCTCGCCC AAGGGCATCGCACAGGCCGCCGGGCTTATGGTGAACTACCGCTATGTGCTGGCGGACATCGAGAAGAACCACGAAGCCTT CCTCGGCAAGGGCGAGGTGGTGGCGAGCGGACCCGTGAAGAAGCTGCTGAAGGCCGAGGCCGCCAGCCGCGCGCTCGTTC CCACCTCCTGA
Upstream 100 bases:
>100_bases AGAAGGGGCGTGCGGCGCACGCGCGCCTTGCCATTGCCGGCTTCCCGCTCTCCCATAGGCGCTCCGACAGCGGGCTCTGA GACCACGGCGGGGCGATGCG
Downstream 100 bases:
>100_bases GGCAGGACGGACCAAACCAGATCGGTTCCCGGAAGAAGGGGCCGATGGCACGAGAGAAACCATGAGCGACAACCATCTCT TCGGCGCCATCCGCGCCGCC
Product: malonyl-CoA decarboxylase
Products: NA
Alternate protein names: Malonyl-CoA Decarboxylase Superfamily; Malonyl-CoA Decarboxylase Superfamily Protein; Malonyl-CoA Decarboxylase Protein; MCD Malonyl-CoA Decarboxylase MCD; Malonyl-CoA Decarboxylase Family Protein; Decarboxylase
Number of amino acids: Translated: 456; Mature: 455
Protein sequence:
>456_residues MSSNTSFFGDLLTSIAERGRSLLDRSSRVSGATKAATLVERCEQLLSGRGEASGVALASDILDRYARMKTGERIAFFEAL AETFGPDRARLEKAIESYGRTGSDAAAAEIHLASEPRRQELFRRFNLGPGATLSLVRMRENLMDALVHRRDLATVDRDFG HLFSSWFNRGFLVLRRIDWSTPANVLEKIIRYEAVHAIRDWNDLRARVDTPDRRCYAFFHPALVDEPLIFVEVALMKDIP GGIAPVLDQSREHLEPEKATTAVFYSISNCQRGLGGVSFGNFLIKQVVEEISREIPSLSTFVTLSPVPGFRAWLDAERKA ENSPALTALDREALAALDTPDWAEKPETREALVPVLSAAAAYYFLVARTTKGKPVDPVARFHLGNGARLERINPMGDLSP KGIAQAAGLMVNYRYVLADIEKNHEAFLGKGEVVASGPVKKLLKAEAASRALVPTS
Sequences:
>Translated_456_residues MSSNTSFFGDLLTSIAERGRSLLDRSSRVSGATKAATLVERCEQLLSGRGEASGVALASDILDRYARMKTGERIAFFEAL AETFGPDRARLEKAIESYGRTGSDAAAAEIHLASEPRRQELFRRFNLGPGATLSLVRMRENLMDALVHRRDLATVDRDFG HLFSSWFNRGFLVLRRIDWSTPANVLEKIIRYEAVHAIRDWNDLRARVDTPDRRCYAFFHPALVDEPLIFVEVALMKDIP GGIAPVLDQSREHLEPEKATTAVFYSISNCQRGLGGVSFGNFLIKQVVEEISREIPSLSTFVTLSPVPGFRAWLDAERKA ENSPALTALDREALAALDTPDWAEKPETREALVPVLSAAAAYYFLVARTTKGKPVDPVARFHLGNGARLERINPMGDLSP KGIAQAAGLMVNYRYVLADIEKNHEAFLGKGEVVASGPVKKLLKAEAASRALVPTS >Mature_455_residues SSNTSFFGDLLTSIAERGRSLLDRSSRVSGATKAATLVERCEQLLSGRGEASGVALASDILDRYARMKTGERIAFFEALA ETFGPDRARLEKAIESYGRTGSDAAAAEIHLASEPRRQELFRRFNLGPGATLSLVRMRENLMDALVHRRDLATVDRDFGH LFSSWFNRGFLVLRRIDWSTPANVLEKIIRYEAVHAIRDWNDLRARVDTPDRRCYAFFHPALVDEPLIFVEVALMKDIPG GIAPVLDQSREHLEPEKATTAVFYSISNCQRGLGGVSFGNFLIKQVVEEISREIPSLSTFVTLSPVPGFRAWLDAERKAE NSPALTALDREALAALDTPDWAEKPETREALVPVLSAAAAYYFLVARTTKGKPVDPVARFHLGNGARLERINPMGDLSPK GIAQAAGLMVNYRYVLADIEKNHEAFLGKGEVVASGPVKKLLKAEAASRALVPTS
Specific function: Unknown
COG id: COG1593
COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI110349750, Length=419, Percent_Identity=34.3675417661098, Blast_Score=225, Evalue=6e-59, Organism=Caenorhabditis elegans, GI71985309, Length=431, Percent_Identity=31.554524361949, Blast_Score=213, Evalue=2e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50254; Mature: 50123
Theoretical pI: Translated: 8.09; Mature: 8.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSNTSFFGDLLTSIAERGRSLLDRSSRVSGATKAATLVERCEQLLSGRGEASGVALASD CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHH ILDRYARMKTGERIAFFEALAETFGPDRARLEKAIESYGRTGSDAAAAEIHLASEPRRQE HHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHEEEECCCCHHHH LFRRFNLGPGATLSLVRMRENLMDALVHRRDLATVDRDFGHLFSSWFNRGFLVLRRIDWS HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC TPANVLEKIIRYEAVHAIRDWNDLRARVDTPDRRCYAFFHPALVDEPLIFVEVALMKDIP CCHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCEEEEECHHHHCCCHHHHHHHHHHHCC GGIAPVLDQSREHLEPEKATTAVFYSISNCQRGLGGVSFGNFLIKQVVEEISREIPSLST CCHHHHHHHHHHHCCCHHHHHHHHEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEE FVTLSPVPGFRAWLDAERKAENSPALTALDREALAALDTPDWAEKPETREALVPVLSAAA EEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH AYYFLVARTTKGKPVDPVARFHLGNGARLERINPMGDLSPKGIAQAAGLMVNYRYVLADI HHHHHHEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEHH EKNHEAFLGKGEVVASGPVKKLLKAEAASRALVPTS HCCHHHHCCCCCEEECCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SSNTSFFGDLLTSIAERGRSLLDRSSRVSGATKAATLVERCEQLLSGRGEASGVALASD CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHH ILDRYARMKTGERIAFFEALAETFGPDRARLEKAIESYGRTGSDAAAAEIHLASEPRRQE HHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHEEEECCCCHHHH LFRRFNLGPGATLSLVRMRENLMDALVHRRDLATVDRDFGHLFSSWFNRGFLVLRRIDWS HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC TPANVLEKIIRYEAVHAIRDWNDLRARVDTPDRRCYAFFHPALVDEPLIFVEVALMKDIP CCHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCEEEEECHHHHCCCHHHHHHHHHHHCC GGIAPVLDQSREHLEPEKATTAVFYSISNCQRGLGGVSFGNFLIKQVVEEISREIPSLST CCHHHHHHHHHHHCCCHHHHHHHHEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEE FVTLSPVPGFRAWLDAERKAENSPALTALDREALAALDTPDWAEKPETREALVPVLSAAA EEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH AYYFLVARTTKGKPVDPVARFHLGNGARLERINPMGDLSPKGIAQAAGLMVNYRYVLADI HHHHHHEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEHH EKNHEAFLGKGEVVASGPVKKLLKAEAASRALVPTS HCCHHHHCCCCCEEECCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA