Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154244457
Identifier: 154244457
GI number: 154244457
Start: 554504
End: 554944
Strand: Reverse
Name: 154244457
Synonym: Xaut_0500
Alternate gene names: NA
Gene position: 554944-554504 (Counterclockwise)
Preceding gene: 154244458
Following gene: 154244456
Centisome position: 10.45
GC content: 61.45
Gene sequence:
>441_bases ATGACCCAAGCTTCCGAACAGATGACCGACAACTCCACGGGCATGAGCTATCTCGACAGCCTGCCCAGGCGGCTGGTCAC GGTCATCCTGCCGCTGCTGGTGTTCGTCTTCGTGCTGCTGTTCCCGTTCTACTGGATGGCGATCACGGCCATCAAACCGA ACTACCAGCTCACGGACTACAACAACTATTCGCCGCTCTGGGTGGTGGAGCCGACGCTGGAGCACATCAAGTACCTGCTG TTCGAGACCTCCTATCCGCACTGGCTGTGGAACACCATCTACATCTCGGTGGCGGCCACCTTCATCTCGCTGGTCACCTC GGTGTTCGCCGCCTACGCCATCGAGCGGCTGCGGTTCAACGGCTCGCGCTGGGTCGGCCTCGGCATCTTCCTCGCCTATC TAGACGTTATGACCGTGGTCCGGGGGGCGGCCCGCCCTTAG
Upstream 100 bases:
>100_bases CCCGCCCGGCCGGCACCGGCCCCTCCCGCCCGTTCCATTCCCCGACCCTCTCCGGCATGCGGATGAGGGAAAGCGCCGCG CCCGCGTCGAGGACCCGCCC
Downstream 100 bases:
>100_bases CCTTTGCAGCGTGAGCAGTCGGGGGTTGCTCGAGGGCCGAGCCGAGCCCCAAGCAAAGGAGGGCGGACCATGAACGAGGA TAGCGTGGTTTACGTCGGTG
Product: putative sugar uptake ABC transporter permease
Products: NA
Alternate protein names: ABC Transporter Permease; Sugar Uptake ABC Transporter Permease Protein; Sugar ABC Transporter Permease Protein; ABC Sugar Transporter Inner Membrane Subunit; Sugar Uptake ABC Transporter Permease; Inner Membrane ABC Transporter Permease Protein YcjP; Sugar ABC Transporter Permease
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MTQASEQMTDNSTGMSYLDSLPRRLVTVILPLLVFVFVLLFPFYWMAITAIKPNYQLTDYNNYSPLWVVEPTLEHIKYLL FETSYPHWLWNTIYISVAATFISLVTSVFAAYAIERLRFNGSRWVGLGIFLAYLDVMTVVRGAARP
Sequences:
>Translated_146_residues MTQASEQMTDNSTGMSYLDSLPRRLVTVILPLLVFVFVLLFPFYWMAITAIKPNYQLTDYNNYSPLWVVEPTLEHIKYLL FETSYPHWLWNTIYISVAATFISLVTSVFAAYAIERLRFNGSRWVGLGIFLAYLDVMTVVRGAARP >Mature_145_residues TQASEQMTDNSTGMSYLDSLPRRLVTVILPLLVFVFVLLFPFYWMAITAIKPNYQLTDYNNYSPLWVVEPTLEHIKYLLF ETSYPHWLWNTIYISVAATFISLVTSVFAAYAIERLRFNGSRWVGLGIFLAYLDVMTVVRGAARP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16845; Mature: 16714
Theoretical pI: Translated: 7.65; Mature: 7.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQASEQMTDNSTGMSYLDSLPRRLVTVILPLLVFVFVLLFPFYWMAITAIKPNYQLTDY CCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCC NNYSPLWVVEPTLEHIKYLLFETSYPHWLWNTIYISVAATFISLVTSVFAAYAIERLRFN CCCCCEEEECHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GSRWVGLGIFLAYLDVMTVVRGAARP CCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TQASEQMTDNSTGMSYLDSLPRRLVTVILPLLVFVFVLLFPFYWMAITAIKPNYQLTDY CCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCC NNYSPLWVVEPTLEHIKYLLFETSYPHWLWNTIYISVAATFISLVTSVFAAYAIERLRFN CCCCCEEEECHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GSRWVGLGIFLAYLDVMTVVRGAARP CCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA