Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154244362
Identifier: 154244362
GI number: 154244362
Start: 435664
End: 436200
Strand: Reverse
Name: 154244362
Synonym: Xaut_0405
Alternate gene names: NA
Gene position: 436200-435664 (Counterclockwise)
Preceding gene: 154244364
Following gene: 154244361
Centisome position: 8.22
GC content: 67.41
Gene sequence:
>537_bases ATGACGCTTCCTCGTGTCCATCCGACTCCTGTCCATCCGACTCTCCTGGGCGTGTTCCTCGCCTGCGCGCTCGCGGCCCC CGCCGCTGCGCAGGGGCAGCCCCAGTCCAAGTCCGTGGCGCAGTTCGGGGATTGGAGCGTCTACGTCTCCACCGTCAGCC CGAAGGTGTGCTACGCCATCTCCCAGCCCAAGACCCGCGCGCCGGAAGGCCTGAAGCGCGACCCGGCGTTCTTCTTCGTG TCCACCCGCCCGAGTGAGAACGTGAAGAACGAGGTGACCGTCACCATGGGCTTCCCGCTGAAGGAAGGCTCGGACGCGAC GCTGACCATCGGCGCCATGAAGCTCCAGCTCTACACGAAGAACGAGGGCGCCTGGGTGCGCAACGTGGCCGACGAGGCCA AGCTCGTGGACGCCATGCGCCGCGGCAAGGACCTGACCGTCGTGTCCACGTCCCTGCGCGGCAACCCCACCACGGACAAA TATTCCATGACCGGCCTCGGCCAGGCCCTCGACCGGGCCGCGCAGGAGTGCAAGTGA
Upstream 100 bases:
>100_bases GTGAGAGGGCGATTTGCCGATGAGATGGAACCGTTTCGATCTCGCCGGATCGCGCTCTCGTCCGGCTCGCCTGAAGGGCC TTGGTGAAATAGGAGAAGCC
Downstream 100 bases:
>100_bases CGCGGCAATATGTGACGCAGGGATAAGTGACGCCGGTGCAAGGGTGTCACGACAGCTCATATGATGGGGCCGGGCGCGAT CGAACCGCGCCCGGCCCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MTLPRVHPTPVHPTLLGVFLACALAAPAAAQGQPQSKSVAQFGDWSVYVSTVSPKVCYAISQPKTRAPEGLKRDPAFFFV STRPSENVKNEVTVTMGFPLKEGSDATLTIGAMKLQLYTKNEGAWVRNVADEAKLVDAMRRGKDLTVVSTSLRGNPTTDK YSMTGLGQALDRAAQECK
Sequences:
>Translated_178_residues MTLPRVHPTPVHPTLLGVFLACALAAPAAAQGQPQSKSVAQFGDWSVYVSTVSPKVCYAISQPKTRAPEGLKRDPAFFFV STRPSENVKNEVTVTMGFPLKEGSDATLTIGAMKLQLYTKNEGAWVRNVADEAKLVDAMRRGKDLTVVSTSLRGNPTTDK YSMTGLGQALDRAAQECK >Mature_177_residues TLPRVHPTPVHPTLLGVFLACALAAPAAAQGQPQSKSVAQFGDWSVYVSTVSPKVCYAISQPKTRAPEGLKRDPAFFFVS TRPSENVKNEVTVTMGFPLKEGSDATLTIGAMKLQLYTKNEGAWVRNVADEAKLVDAMRRGKDLTVVSTSLRGNPTTDKY SMTGLGQALDRAAQECK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19170; Mature: 19039
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLPRVHPTPVHPTLLGVFLACALAAPAAAQGQPQSKSVAQFGDWSVYVSTVSPKVCYAI CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCEEEEEEECCCEEEEEE SQPKTRAPEGLKRDPAFFFVSTRPSENVKNEVTVTMGFPLKEGSDATLTIGAMKLQLYTK CCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEEEEEEC NEGAWVRNVADEAKLVDAMRRGKDLTVVSTSLRGNPTTDKYSMTGLGQALDRAAQECK CCCCEEHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEHHHHHHHHHHHHHHCC >Mature Secondary Structure TLPRVHPTPVHPTLLGVFLACALAAPAAAQGQPQSKSVAQFGDWSVYVSTVSPKVCYAI CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCEEEEEEECCCEEEEEE SQPKTRAPEGLKRDPAFFFVSTRPSENVKNEVTVTMGFPLKEGSDATLTIGAMKLQLYTK CCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEEEEEEC NEGAWVRNVADEAKLVDAMRRGKDLTVVSTSLRGNPTTDKYSMTGLGQALDRAAQECK CCCCEEHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA