Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154244349
Identifier: 154244349
GI number: 154244349
Start: 420923
End: 421573
Strand: Reverse
Name: 154244349
Synonym: Xaut_0392
Alternate gene names: NA
Gene position: 421573-420923 (Counterclockwise)
Preceding gene: 154244350
Following gene: 154244348
Centisome position: 7.94
GC content: 63.75
Gene sequence:
>651_bases ATGACGCCGCGCACCGTGACGGTCGCCCTGAGCCTTGTGACCGCGCTCCTGTTCGCCGCCCTGGCGCCGCGCCCGGCGCA GGCGCACCCCCATGTGTGGGTCACCATGAAGAGCGAGCTGGTCTACGATGCCAGCGGCCGCCTCACCGGGGTGAAGCAGA TCTGGACCTTCGACGATGCCTTCTCTGCCTTCGCCCTGCAGGGCATGGAGAAGCAGAAGGACGGCAGCTATGGCGACGAT GTGCTGAAGCCCCTCGCCGAGGTGAACGTCACGTCCCTGAAGGAATACAACTACTTCGTGGTGGGCAAGACGGCGACCAC CAAGCTCGCCTTCAAGGACCCCGTCGACTATTTCCTCACCTATGAGAACGAGTTGCTCACCCTGCACTTCACCCTGCCGC TGGAAAAGCCGGTGGCAGCGAAGGGGACCACCTCACTCGAGATCTACGATCCCACCGCCTTCGTCTCCTTCTCCTTCAAC GAGAAGGATCCGGTGAAGCTCATTTCCGCCCCGGGCGGCTGCACCCAGGAGGTGATCTCCCCGGAGCCGCCGGCGAGCGG GACGCTGAACGAGGCCTTCTTCTCGAACCTCACCTCGGCCAGCACCTATGGCGCCCAGTTCGCCGACAAGATCACGGTGA AATGCCCGTGA
Upstream 100 bases:
>100_bases CGCTTCCGCCGAAGTCCGGGGCAAGGTGAGACCCTGCCCGGATTCGGGGCTGCCTCCGCAGCGGCCGCATCCACGGGCGG GTGAACGAGGACGATTGCCG
Downstream 100 bases:
>100_bases GCCAGATGACCGTGAAAGCGCCGGCCGGGGCCGGGCGGCCCCTGCGCTGGCTCGCCGTGCTGCTGCTGGGGCTGACCGCC GCCCTCGCCTTCGCCCTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MTPRTVTVALSLVTALLFAALAPRPAQAHPHVWVTMKSELVYDASGRLTGVKQIWTFDDAFSAFALQGMEKQKDGSYGDD VLKPLAEVNVTSLKEYNYFVVGKTATTKLAFKDPVDYFLTYENELLTLHFTLPLEKPVAAKGTTSLEIYDPTAFVSFSFN EKDPVKLISAPGGCTQEVISPEPPASGTLNEAFFSNLTSASTYGAQFADKITVKCP
Sequences:
>Translated_216_residues MTPRTVTVALSLVTALLFAALAPRPAQAHPHVWVTMKSELVYDASGRLTGVKQIWTFDDAFSAFALQGMEKQKDGSYGDD VLKPLAEVNVTSLKEYNYFVVGKTATTKLAFKDPVDYFLTYENELLTLHFTLPLEKPVAAKGTTSLEIYDPTAFVSFSFN EKDPVKLISAPGGCTQEVISPEPPASGTLNEAFFSNLTSASTYGAQFADKITVKCP >Mature_215_residues TPRTVTVALSLVTALLFAALAPRPAQAHPHVWVTMKSELVYDASGRLTGVKQIWTFDDAFSAFALQGMEKQKDGSYGDDV LKPLAEVNVTSLKEYNYFVVGKTATTKLAFKDPVDYFLTYENELLTLHFTLPLEKPVAAKGTTSLEIYDPTAFVSFSFNE KDPVKLISAPGGCTQEVISPEPPASGTLNEAFFSNLTSASTYGAQFADKITVKCP
Specific function: Unknown
COG id: COG3683
COG function: function code R; ABC-type uncharacterized transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23517; Mature: 23386
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPRTVTVALSLVTALLFAALAPRPAQAHPHVWVTMKSELVYDASGRLTGVKQIWTFDDA CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCEEECCCCCEECCEEEEEHHHH FSAFALQGMEKQKDGSYGDDVLKPLAEVNVTSLKEYNYFVVGKTATTKLAFKDPVDYFLT HHHHHHCCCCCCCCCCCCHHHHHHHHHCCHHEEEECCEEEEECCCEEEEEECCCCCEEEE YENELLTLHFTLPLEKPVAAKGTTSLEIYDPTAFVSFSFNEKDPVKLISAPGGCTQEVIS ECCEEEEEEEEECCCCCCCCCCCCEEEEECCEEEEEEECCCCCCEEEEECCCCCCHHHCC PEPPASGTLNEAFFSNLTSASTYGAQFADKITVKCP CCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEECC >Mature Secondary Structure TPRTVTVALSLVTALLFAALAPRPAQAHPHVWVTMKSELVYDASGRLTGVKQIWTFDDA CCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCEEECCCCCEECCEEEEEHHHH FSAFALQGMEKQKDGSYGDDVLKPLAEVNVTSLKEYNYFVVGKTATTKLAFKDPVDYFLT HHHHHHCCCCCCCCCCCCHHHHHHHHHCCHHEEEECCEEEEECCCEEEEEECCCCCEEEE YENELLTLHFTLPLEKPVAAKGTTSLEIYDPTAFVSFSFNEKDPVKLISAPGGCTQEVIS ECCEEEEEEEEECCCCCCCCCCCCEEEEECCEEEEEEECCCCCCEEEEECCCCCCHHHCC PEPPASGTLNEAFFSNLTSASTYGAQFADKITVKCP CCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA