Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
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Accession | NC_009708 |
Length | 4,723,306 |
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The map label for this gene is 153950423
Identifier: 153950423
GI number: 153950423
Start: 3336505
End: 3336807
Strand: Direct
Name: 153950423
Synonym: YpsIP31758_2966
Alternate gene names: NA
Gene position: 3336505-3336807 (Clockwise)
Preceding gene: 153950784
Following gene: 153950415
Centisome position: 70.64
GC content: 45.21
Gene sequence:
>303_bases GTGCAATCTCCGAGTAATAATAGCCGCGCACATTGCAGCAAACCCTTTTTATATCGCCAAAATCAGTGGCATTTTAGCCA GGCAATAAGTGAATATCGCCTTCCTGCTCCGTTAAGTGCGCAGGATTTAACCGATAGCGTCAATCACATCAACATGAGCG TGATAAAGGACAACGCGATCAGAGCCAGTGGGACAGCGAAAATAATGATGAACCACCGCTTACGAAGAACAGCCGCCACG ATTAAACCTACGCACATCGCGGCGACAACAGGCCAATATATCATTGAAAAAACAATGATATAA
Upstream 100 bases:
>100_bases AGGCAGCAAAAATTTGAGTATGCGGGAACGATCCATATTTATCTGTTTTTCATCTCTGGCAAAGCAACAATATTCATGCC TTATATTCTGACAGCTATCT
Downstream 100 bases:
>100_bases AAAATCCATGATCCTAATTCTGTGGGATTAAACGAAAAATCCATGTTAGCCTCAGTCATTCCATTATATTAAAAACTAAA TTTTACAGTATAAATTTATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 100; Mature: 100
Protein sequence:
>100_residues MQSPSNNSRAHCSKPFLYRQNQWHFSQAISEYRLPAPLSAQDLTDSVNHINMSVIKDNAIRASGTAKIMMNHRLRRTAAT IKPTHIAATTGQYIIEKTMI
Sequences:
>Translated_100_residues MQSPSNNSRAHCSKPFLYRQNQWHFSQAISEYRLPAPLSAQDLTDSVNHINMSVIKDNAIRASGTAKIMMNHRLRRTAAT IKPTHIAATTGQYIIEKTMI >Mature_100_residues MQSPSNNSRAHCSKPFLYRQNQWHFSQAISEYRLPAPLSAQDLTDSVNHINMSVIKDNAIRASGTAKIMMNHRLRRTAAT IKPTHIAATTGQYIIEKTMI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11295; Mature: 11295
Theoretical pI: Translated: 10.77; Mature: 10.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSPSNNSRAHCSKPFLYRQNQWHFSQAISEYRLPAPLSAQDLTDSVNHINMSVIKDNAI CCCCCCCCCCCCCCCEEECCCCCCHHHHHHHCCCCCCCCHHHHHHCHHHEEEEEEECCCE RASGTAKIMMNHRLRRTAATIKPTHIAATTGQYIIEKTMI ECCCCEEEEEHHHHHHHHCCCCCCEEEECCCCCCEEECCC >Mature Secondary Structure MQSPSNNSRAHCSKPFLYRQNQWHFSQAISEYRLPAPLSAQDLTDSVNHINMSVIKDNAI CCCCCCCCCCCCCCCEEECCCCCCHHHHHHHCCCCCCCCHHHHHHCHHHEEEEEEECCCE RASGTAKIMMNHRLRRTAATIKPTHIAATTGQYIIEKTMI ECCCCEEEEEHHHHHHHHCCCCCCEEEECCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA