Click here to switch to the map view.

The map label for this gene is ruvA [H]

Identifier: 153952036

GI number: 153952036

Start: 1063655

End: 1064206

Strand: Direct

Name: ruvA [H]

Synonym: JJD26997_1211

Alternate gene names: 153952036

Gene position: 1063655-1064206 (Clockwise)

Preceding gene: 153951076

Following gene: 153952610

Centisome position: 57.65

GC content: 32.97

Gene sequence:

>552_bases
ATGGTTGTCGGCATCGAAGGAATAATCACAAAAAAAGAACCTACTTTTATCATTGTTAAATGTGCTAGTGGTTTAAGCTA
TGGGATATTTATTTCGCTTTTTTGTTCTGCTAAAATTCAAACCCAAGAAAAGCATGAGTTTTTTATCACTCAAATTATCA
AAGAAGATTCTAATAAATTTTATGGTTTCTTAGATAAAGATGAACAAAAAATGTTTGAAATGCTTTTGAAAGTCAATGGA
GTAGGTGCAAATACTGCTATGGCAGTATGCTCTAGTCTTGATATAAATTCTTTTTACAAAGCGTTAAGTTTGGGCGATGA
AAGCGTGCTTAAAAAAGTACCTGGTATAGGTCCAAAAAGTGCAAAACGTATTATAGTAGAACTTTCAGATACAAGAACCA
AACTTGAAAATGTAAGCGATGATAAAAGTGAAGCCTTAGCCGCACTTCTTACTCTAGGCTTTAAACAAGAAAAAATCATA
AGTGTTTTAGCAAGTGCTCAGGCAACAGGCACAAGCGAACTCATCAAAGAAGCTCTTAAAAAACTAAGATAA

Upstream 100 bases:

>100_bases
ATGAAAGTGCTAAATTCATAGGCATTAAAAAAGTCATACAAAACAACCAAGAAAGTATAGAAATACATAAAAAATTAGAT
TATAAAGAAAAGGATATAGC

Downstream 100 bases:

>100_bases
AGGAATAAAATGAAATTTGCAATACTTTTTGGCGGAAATTCTTATGAACATGAGATCAGCATAGTAAGCGCTGTTGCACT
TAAAAAAGTCATTAATCAAA

Product: Holliday junction DNA helicase RuvA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MVVGIEGIITKKEPTFIIVKCASGLSYGIFISLFCSAKIQTQEKHEFFITQIIKEDSNKFYGFLDKDEQKMFEMLLKVNG
VGANTAMAVCSSLDINSFYKALSLGDESVLKKVPGIGPKSAKRIIVELSDTRTKLENVSDDKSEALAALLTLGFKQEKII
SVLASAQATGTSELIKEALKKLR

Sequences:

>Translated_183_residues
MVVGIEGIITKKEPTFIIVKCASGLSYGIFISLFCSAKIQTQEKHEFFITQIIKEDSNKFYGFLDKDEQKMFEMLLKVNG
VGANTAMAVCSSLDINSFYKALSLGDESVLKKVPGIGPKSAKRIIVELSDTRTKLENVSDDKSEALAALLTLGFKQEKII
SVLASAQATGTSELIKEALKKLR
>Mature_183_residues
MVVGIEGIITKKEPTFIIVKCASGLSYGIFISLFCSAKIQTQEKHEFFITQIIKEDSNKFYGFLDKDEQKMFEMLLKVNG
VGANTAMAVCSSLDINSFYKALSLGDESVLKKVPGIGPKSAKRIIVELSDTRTKLENVSDDKSEALAALLTLGFKQEKII
SVLASAQATGTSELIKEALKKLR

Specific function: The ruvA-ruvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is an helicase that mediates the Holliday

COG id: COG0632

COG function: function code L; Holliday junction resolvasome, DNA-binding subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ruvA family [H]

Homologues:

Organism=Escherichia coli, GI1788168, Length=202, Percent_Identity=29.7029702970297, Blast_Score=100, Evalue=6e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011114
- InterPro:   IPR013849
- InterPro:   IPR003583
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000085
- InterPro:   IPR010994 [H]

Pfam domain/function: PF07499 RuvA_C; PF01330 RuvA_N [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 20047; Mature: 20047

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVGIEGIITKKEPTFIIVKCASGLSYGIFISLFCSAKIQTQEKHEFFITQIIKEDSNKF
CEECCCEEEECCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCE
YGFLDKDEQKMFEMLLKVNGVGANTAMAVCSSLDINSFYKALSLGDESVLKKVPGIGPKS
EEECCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHCCHHHHHHHCCCCCCCC
AKRIIVELSDTRTKLENVSDDKSEALAALLTLGFKQEKIISVLASAQATGTSELIKEALK
HHEEEEEECHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHH
KLR
HCC
>Mature Secondary Structure
MVVGIEGIITKKEPTFIIVKCASGLSYGIFISLFCSAKIQTQEKHEFFITQIIKEDSNKF
CEECCCEEEECCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCE
YGFLDKDEQKMFEMLLKVNGVGANTAMAVCSSLDINSFYKALSLGDESVLKKVPGIGPKS
EEECCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHCCHHHHHHHCCCCCCCC
AKRIIVELSDTRTKLENVSDDKSEALAALLTLGFKQEKIISVLASAQATGTSELIKEALK
HHEEEEEECHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHH
KLR
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA