Click here to switch to the map view.

The map label for this gene is 153936882

Identifier: 153936882

GI number: 153936882

Start: 1694536

End: 1694874

Strand: Reverse

Name: 153936882

Synonym: CLC_1623

Alternate gene names: NA

Gene position: 1694874-1694536 (Counterclockwise)

Preceding gene: 153937719

Following gene: 153934777

Centisome position: 45.07

GC content: 35.99

Gene sequence:

>339_bases
ATGTGTAATTGTGAAGAAAGAGAAAGACAAACTCACGTTCATGAATTCTTAGGTAGCACTCGATTAGCTGAAATTCAAAC
TGAACCTCATAACCATCGTTTTGCTGGTGTTAGTGGTCAAGCTATAAGAATGGGTAATAGTCACGTGCACAGAATAACTA
CAAATACAGATTTCTTCGATCACTTTCACAGAATAAATGTTCTTAGTGGCCCTGCAATACCTGTAGGAAATGGTAGACAT
GTGCACTTTGTATCTGGTGTTACAAGCTTTAATGATGGTCATAGACATGAATTTATTTTTGCAACACTAATTGAAGCCCC
TATATTTGAAGAAGATTAA

Upstream 100 bases:

>100_bases
TAAATACTTAGTATGTACTCATCTTCTTTCCAAAGCATTAGTAACAATAATCAATTATTTTCATAATATAATACTATCCA
GAAATAAAGGAGGTGAGTAT

Downstream 100 bases:

>100_bases
TTTTATTTAATATAGGACAGCTTAATATATTTTTATATTAAGCTGTCCATTCTAATATAAAAATACTTGGAATTAACTAA
GTGCTTTGCTGTGTCTCTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MCNCEERERQTHVHEFLGSTRLAEIQTEPHNHRFAGVSGQAIRMGNSHVHRITTNTDFFDHFHRINVLSGPAIPVGNGRH
VHFVSGVTSFNDGHRHEFIFATLIEAPIFEED

Sequences:

>Translated_112_residues
MCNCEERERQTHVHEFLGSTRLAEIQTEPHNHRFAGVSGQAIRMGNSHVHRITTNTDFFDHFHRINVLSGPAIPVGNGRH
VHFVSGVTSFNDGHRHEFIFATLIEAPIFEED
>Mature_112_residues
MCNCEERERQTHVHEFLGSTRLAEIQTEPHNHRFAGVSGQAIRMGNSHVHRITTNTDFFDHFHRINVLSGPAIPVGNGRH
VHFVSGVTSFNDGHRHEFIFATLIEAPIFEED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12755; Mature: 12755

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCNCEERERQTHVHEFLGSTRLAEIQTEPHNHRFAGVSGQAIRMGNSHVHRITTNTDFFD
CCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCEEECCCCCEEEECCCEEEEEECCCCHHH
HFHRINVLSGPAIPVGNGRHVHFVSGVTSFNDGHRHEFIFATLIEAPIFEED
HHHEEEECCCCCEECCCCCEEEEECCCCCCCCCCCHHEEEEEECCCCCCCCC
>Mature Secondary Structure
MCNCEERERQTHVHEFLGSTRLAEIQTEPHNHRFAGVSGQAIRMGNSHVHRITTNTDFFD
CCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCEEECCCCCEEEECCCEEEEEECCCCHHH
HFHRINVLSGPAIPVGNGRHVHFVSGVTSFNDGHRHEFIFATLIEAPIFEED
HHHEEEECCCCCEECCCCCEEEEECCCCCCCCCCCHHEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA