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The map label for this gene is yjeM [H]

Identifier: 153935146

GI number: 153935146

Start: 1920709

End: 1922235

Strand: Reverse

Name: yjeM [H]

Synonym: CLC_1812

Alternate gene names: 153935146

Gene position: 1922235-1920709 (Counterclockwise)

Preceding gene: 153936106

Following gene: 153935175

Centisome position: 51.12

GC content: 31.24

Gene sequence:

>1527_bases
ATGTCACAAAATTCACGAACAACTAAAAAATTAACTTTGATACCATTGATATTAATGATTTTTACTTCGGTGTTTGGCTT
TGCTAACATGCCTAGATCTTTTTACTTAATGGGTTATGGTGCTATTCCTTGGTATATTTTATCTGGTGTAACATTCTTTA
TTCCTTATGCATTTATGATGGCAGAGTATGGTGCGGCTTTTAAGGATGAAAAAGGTGGAATTTATTCCTGGATGGAGAAA
TCTGTAGGAGCAAAATATGCTTTTGTAGGGACCTTTATGTGGTATGCATCCTATATAATTTGGATGGTTAACATTTGTTC
AACACTATGGATTCCAATTTCAAATGCAATTTTTGGTAAAGATACTACTTCAACTTGGGCATTCTTGGGATTAAATTCAA
CTCAAGTTTTAGGTGTATTAGGTATAATTTGGATAATACTTGTAACTTTTACTGCTTCTAAAGGATTAGAAAAAATAACT
AAAGTAACTTCTATAGGAGGAACTGCAGTTGCACTTTTAAATATTGTCTTGTTAGTTAGTGCAATAATTATCCTTATAGC
AAATGGTGGACAACTAGCAGAACCTATAACTTCTGTTAAATCTATTGTACAATCTCCAAATCCTGCATATCAGAATCCAA
TTTCTGTATTAGCTTTTATAGTTTTTGCTATATTTGGTTATGGTGGTATAGAAGTTGTTGGAGGACTTGTAGATCAAACT
GAAAACGCTGAGGTAACTTTTCCTAAAGGAATTACTATTGCAGCTATTATCATTGCAGTAGGATATTCAATTGGGATATT
CTTATGTGGCATAGTTACAAATTGGGATAGTGTTTTAGCTTCCAAAGACGTAAATATAGGAAATATAGCATATGCACTAA
TGCATAATTTAGGATATCAATTAGGGCATTCTTTTGGAATTAGCGAAGCATCATCAATATTAATGGGGGATTGGATCGCA
AGATTTGTAGGATTTTCTATGTTTTTAGCTTTAACTGGAGCTTTCTTTACATTATCTTATGCTCCACTAAAACAACTTAT
AGAAGGTACTCCAAATAAATTATGGCCTGGAAAAATGGCCAAAATTGAAAACGGCATGCCTTTAAATGCTATGCGTGTTC
AATGTATAATTGTAATGGTATTTATTGCATTAGTATCTTTTGGAGGAGACGCAGCAGCTAAGTTTTTTGGAAAATTAATT
CTTATGACCAACGTTGCAATGACTATACCTTATATGTTTTTATCAAGCGCATTCATTTCTTTTAAAAAGAAAACCGAAAT
AAAAAAACCATTTGAAGTTTATAAAACTAGGAAAAGTACAGTTATTGCTGCAGTTGTAGTTACATTTACTATAGCTTTTG
CTAATTTTTTCACAATAATAGAACCGGCTACAAAGGGCAATATATCAGATACAATATTCTCAATTATTGGACCTATATTT
TTTAGCATAGTTGCTATATTAATGTATAATTCCTATGAGAAAAAGTATGTTATTAAAAGTGAAAAGGGTAAAACTAAAAA
TTTATAA

Upstream 100 bases:

>100_bases
TCACCAATATAATAGAAAAAAATAAAAAATATTGAAATTACAAAAATATAGGTTATAATTAAATTGTAAGAAATAAAATT
ATAGTATGAGGTGGAAAAAT

Downstream 100 bases:

>100_bases
GTTATAATTTATATAAAAATAGAGGGGATACTAAATTTAATCCCTTCTATTTTTTAGTGCTCTAAGCTTTGGCAACAATT
TGACAGTGAAAGTTACCTCT

Product: amino acid permease family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 508; Mature: 507

Protein sequence:

>508_residues
MSQNSRTTKKLTLIPLILMIFTSVFGFANMPRSFYLMGYGAIPWYILSGVTFFIPYAFMMAEYGAAFKDEKGGIYSWMEK
SVGAKYAFVGTFMWYASYIIWMVNICSTLWIPISNAIFGKDTTSTWAFLGLNSTQVLGVLGIIWIILVTFTASKGLEKIT
KVTSIGGTAVALLNIVLLVSAIIILIANGGQLAEPITSVKSIVQSPNPAYQNPISVLAFIVFAIFGYGGIEVVGGLVDQT
ENAEVTFPKGITIAAIIIAVGYSIGIFLCGIVTNWDSVLASKDVNIGNIAYALMHNLGYQLGHSFGISEASSILMGDWIA
RFVGFSMFLALTGAFFTLSYAPLKQLIEGTPNKLWPGKMAKIENGMPLNAMRVQCIIVMVFIALVSFGGDAAAKFFGKLI
LMTNVAMTIPYMFLSSAFISFKKKTEIKKPFEVYKTRKSTVIAAVVVTFTIAFANFFTIIEPATKGNISDTIFSIIGPIF
FSIVAILMYNSYEKKYVIKSEKGKTKNL

Sequences:

>Translated_508_residues
MSQNSRTTKKLTLIPLILMIFTSVFGFANMPRSFYLMGYGAIPWYILSGVTFFIPYAFMMAEYGAAFKDEKGGIYSWMEK
SVGAKYAFVGTFMWYASYIIWMVNICSTLWIPISNAIFGKDTTSTWAFLGLNSTQVLGVLGIIWIILVTFTASKGLEKIT
KVTSIGGTAVALLNIVLLVSAIIILIANGGQLAEPITSVKSIVQSPNPAYQNPISVLAFIVFAIFGYGGIEVVGGLVDQT
ENAEVTFPKGITIAAIIIAVGYSIGIFLCGIVTNWDSVLASKDVNIGNIAYALMHNLGYQLGHSFGISEASSILMGDWIA
RFVGFSMFLALTGAFFTLSYAPLKQLIEGTPNKLWPGKMAKIENGMPLNAMRVQCIIVMVFIALVSFGGDAAAKFFGKLI
LMTNVAMTIPYMFLSSAFISFKKKTEIKKPFEVYKTRKSTVIAAVVVTFTIAFANFFTIIEPATKGNISDTIFSIIGPIF
FSIVAILMYNSYEKKYVIKSEKGKTKNL
>Mature_507_residues
SQNSRTTKKLTLIPLILMIFTSVFGFANMPRSFYLMGYGAIPWYILSGVTFFIPYAFMMAEYGAAFKDEKGGIYSWMEKS
VGAKYAFVGTFMWYASYIIWMVNICSTLWIPISNAIFGKDTTSTWAFLGLNSTQVLGVLGIIWIILVTFTASKGLEKITK
VTSIGGTAVALLNIVLLVSAIIILIANGGQLAEPITSVKSIVQSPNPAYQNPISVLAFIVFAIFGYGGIEVVGGLVDQTE
NAEVTFPKGITIAAIIIAVGYSIGIFLCGIVTNWDSVLASKDVNIGNIAYALMHNLGYQLGHSFGISEASSILMGDWIAR
FVGFSMFLALTGAFFTLSYAPLKQLIEGTPNKLWPGKMAKIENGMPLNAMRVQCIIVMVFIALVSFGGDAAAKFFGKLIL
MTNVAMTIPYMFLSSAFISFKKKTEIKKPFEVYKTRKSTVIAAVVVTFTIAFANFFTIIEPATKGNISDTIFSIIGPIFF
SIVAILMYNSYEKKYVIKSEKGKTKNL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI87082380, Length=492, Percent_Identity=54.2682926829268, Blast_Score=536, Evalue=1e-153,
Organism=Escherichia coli, GI87081798, Length=451, Percent_Identity=23.7250554323725, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI48994921, Length=488, Percent_Identity=25.8196721311475, Blast_Score=105, Evalue=7e-24,
Organism=Escherichia coli, GI1787768, Length=480, Percent_Identity=21.0416666666667, Blast_Score=62, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 55508; Mature: 55376

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQNSRTTKKLTLIPLILMIFTSVFGFANMPRSFYLMGYGAIPWYILSGVTFFIPYAFMM
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH
AEYGAAFKDEKGGIYSWMEKSVGAKYAFVGTFMWYASYIIWMVNICSTLWIPISNAIFGK
HHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DTTSTWAFLGLNSTQVLGVLGIIWIILVTFTASKGLEKITKVTSIGGTAVALLNIVLLVS
CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
AIIILIANGGQLAEPITSVKSIVQSPNPAYQNPISVLAFIVFAIFGYGGIEVVGGLVDQT
HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCC
ENAEVTFPKGITIAAIIIAVGYSIGIFLCGIVTNWDSVLASKDVNIGNIAYALMHNLGYQ
CCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
LGHSFGISEASSILMGDWIARFVGFSMFLALTGAFFTLSYAPLKQLIEGTPNKLWPGKMA
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
KIENGMPLNAMRVQCIIVMVFIALVSFGGDAAAKFFGKLILMTNVAMTIPYMFLSSAFIS
HHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FKKKTEIKKPFEVYKTRKSTVIAAVVVTFTIAFANFFTIIEPATKGNISDTIFSIIGPIF
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
FSIVAILMYNSYEKKYVIKSEKGKTKNL
HHHHHHHHHCCCCCEEEEECCCCCCCCC
>Mature Secondary Structure 
SQNSRTTKKLTLIPLILMIFTSVFGFANMPRSFYLMGYGAIPWYILSGVTFFIPYAFMM
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH
AEYGAAFKDEKGGIYSWMEKSVGAKYAFVGTFMWYASYIIWMVNICSTLWIPISNAIFGK
HHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DTTSTWAFLGLNSTQVLGVLGIIWIILVTFTASKGLEKITKVTSIGGTAVALLNIVLLVS
CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
AIIILIANGGQLAEPITSVKSIVQSPNPAYQNPISVLAFIVFAIFGYGGIEVVGGLVDQT
HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCC
ENAEVTFPKGITIAAIIIAVGYSIGIFLCGIVTNWDSVLASKDVNIGNIAYALMHNLGYQ
CCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
LGHSFGISEASSILMGDWIARFVGFSMFLALTGAFFTLSYAPLKQLIEGTPNKLWPGKMA
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
KIENGMPLNAMRVQCIIVMVFIALVSFGGDAAAKFFGKLILMTNVAMTIPYMFLSSAFIS
HHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FKKKTEIKKPFEVYKTRKSTVIAAVVVTFTIAFANFFTIIEPATKGNISDTIFSIIGPIF
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
FSIVAILMYNSYEKKYVIKSEKGKTKNL
HHHHHHHHHCCCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]