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The map label for this gene is 153934615

Identifier: 153934615

GI number: 153934615

Start: 1777328

End: 1778161

Strand: Direct

Name: 153934615

Synonym: CLC_1688

Alternate gene names: NA

Gene position: 1777328-1778161 (Clockwise)

Preceding gene: 153935576

Following gene: 153936930

Centisome position: 47.26

GC content: 26.86

Gene sequence:

>834_bases
ATGGAAGAAAAGACGATATTATCTAATTCCCAAATAAAATCTAAAGCTAAAGAAGCCTTAAAGGGGAATTGGGGTACAGC
AGTTATTGCATTCATTATATTTAATATAGTAATGTATTGTGTAAACTATGTATATAATATAAATCAAATTTCAAATTATA
TACATGATCCTTATCTAGTTAGGGAGAATGCAGGCTTCGGAGCATCTGGTATTCTATTTTTTATAAAATTACTTTTAGCA
GGTCCTATGACCTATGGAATAACAAAATTCTCTATGAATTTAGTTAGAGATAAAAGTCATAAAATAGAAAATATATTTGA
AGGTTTTAAACATTTTAGTGGAACTTTCATTATGAATATAGTTCTAGGTATATACAGTTTTTTATGGTCATTGTTGCTTT
TTATACCTTTTTTTGCGATTGTTTTTGTTATGGTAATTAGAGAATTTTCAAAAACTAATATGAATTTTTATAGTACAGGT
AATGATTTTAGTGGATGGATGATAGCAATTTTTATACTTTTAATTATAGTTTTAACTGTGGCCTTATCAATGATTTTATT
TAGATATGCTATGACTTATTATATCTATATTGATAATCCAGATATGGGAGCTATGGAAGCTATTAAAGAAAGTGTTTCTA
TGATGAAAGGAAACAAGACAAGATTACTTTTACTATATTTAAGCTTTATATTGTGGTATTTATTGGGGATTGTAACTGTA
GGTATTGCATTTTTATGGATAACTCCTTATATAAAATCTACTGAAGCTGTTTTTTATGATGAGTTAAAGAAGAGTAATGA
GCATAATGCCCATGAAGCAATAAGTGCATTATAA

Upstream 100 bases:

>100_bases
TTTGTATATTTATTGTAAATGAATACAAAGTTTAATGCTATTTGAAATGGGGAAAAAATATGGTATAATAAGAAAAAAAT
ACATACAAAAGGAGACGAAC

Downstream 100 bases:

>100_bases
ATAATATAATGAAAAATTTTTATTTGATTTGGTACTACTTTTAGATATGTACTAACCATTTAAAAGATGGAGACCTATGA
AATCCTTATAATTTTAAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MEEKTILSNSQIKSKAKEALKGNWGTAVIAFIIFNIVMYCVNYVYNINQISNYIHDPYLVRENAGFGASGILFFIKLLLA
GPMTYGITKFSMNLVRDKSHKIENIFEGFKHFSGTFIMNIVLGIYSFLWSLLLFIPFFAIVFVMVIREFSKTNMNFYSTG
NDFSGWMIAIFILLIIVLTVALSMILFRYAMTYYIYIDNPDMGAMEAIKESVSMMKGNKTRLLLLYLSFILWYLLGIVTV
GIAFLWITPYIKSTEAVFYDELKKSNEHNAHEAISAL

Sequences:

>Translated_277_residues
MEEKTILSNSQIKSKAKEALKGNWGTAVIAFIIFNIVMYCVNYVYNINQISNYIHDPYLVRENAGFGASGILFFIKLLLA
GPMTYGITKFSMNLVRDKSHKIENIFEGFKHFSGTFIMNIVLGIYSFLWSLLLFIPFFAIVFVMVIREFSKTNMNFYSTG
NDFSGWMIAIFILLIIVLTVALSMILFRYAMTYYIYIDNPDMGAMEAIKESVSMMKGNKTRLLLLYLSFILWYLLGIVTV
GIAFLWITPYIKSTEAVFYDELKKSNEHNAHEAISAL
>Mature_277_residues
MEEKTILSNSQIKSKAKEALKGNWGTAVIAFIIFNIVMYCVNYVYNINQISNYIHDPYLVRENAGFGASGILFFIKLLLA
GPMTYGITKFSMNLVRDKSHKIENIFEGFKHFSGTFIMNIVLGIYSFLWSLLLFIPFFAIVFVMVIREFSKTNMNFYSTG
NDFSGWMIAIFILLIIVLTVALSMILFRYAMTYYIYIDNPDMGAMEAIKESVSMMKGNKTRLLLLYLSFILWYLLGIVTV
GIAFLWITPYIKSTEAVFYDELKKSNEHNAHEAISAL

Specific function: Unknown

COG id: COG5523

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31772; Mature: 31772

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEKTILSNSQIKSKAKEALKGNWGTAVIAFIIFNIVMYCVNYVYNINQISNYIHDPYLV
CCCCHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
RENAGFGASGILFFIKLLLAGPMTYGITKFSMNLVRDKSHKIENIFEGFKHFSGTFIMNI
ECCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLGIYSFLWSLLLFIPFFAIVFVMVIREFSKTNMNFYSTGNDFSGWMIAIFILLIIVLTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHH
ALSMILFRYAMTYYIYIDNPDMGAMEAIKESVSMMKGNKTRLLLLYLSFILWYLLGIVTV
HHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
GIAFLWITPYIKSTEAVFYDELKKSNEHNAHEAISAL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC
>Mature Secondary Structure
MEEKTILSNSQIKSKAKEALKGNWGTAVIAFIIFNIVMYCVNYVYNINQISNYIHDPYLV
CCCCHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
RENAGFGASGILFFIKLLLAGPMTYGITKFSMNLVRDKSHKIENIFEGFKHFSGTFIMNI
ECCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLGIYSFLWSLLLFIPFFAIVFVMVIREFSKTNMNFYSTGNDFSGWMIAIFILLIIVLTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHH
ALSMILFRYAMTYYIYIDNPDMGAMEAIKESVSMMKGNKTRLLLLYLSFILWYLLGIVTV
HHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
GIAFLWITPYIKSTEAVFYDELKKSNEHNAHEAISAL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA