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The map label for this gene is 153934494

Identifier: 153934494

GI number: 153934494

Start: 1656846

End: 1657841

Strand: Direct

Name: 153934494

Synonym: CLC_1584

Alternate gene names: NA

Gene position: 1656846-1657841 (Clockwise)

Preceding gene: 153935839

Following gene: 153935694

Centisome position: 44.06

GC content: 30.22

Gene sequence:

>996_bases
ATGAAAAAAATAGGACTAACAACTACAGTGCCAGTGGAAGTTATTGTTGCAGCAGGATATACACCAGTAGATTTAAATAA
TATGTTTATAACTTCAGAGAATTATTTAAAATATATAGACATAGCTGAAAGAGACGGTTTCCCTAAAAGCTTATGTGCTT
GGATAAAGGGAATTTATGGAGCATGTCTAGAAAATAATATTAAAGAAATAGTTGGAGTTATGGAGGGGGATTGTTCTAAC
ACTAAAGCCCTCATCGAGGTTTTTAAACTAAGAGGAATAAAAATTTATCCATTTTCATTTCCACATAGCCATAGTTTAAA
GGATGTAGAAATTGAAATAAGAAAGTTCATGGATATCTTCAATGTTAACGAGGATAAGGTAGAACAGGTTAGAAAAAGAT
TAAATAGAGTTAGGAAGCTAGCAAAAAAAATAGATGAAATGACTTATATAGATAATAAGGTTAATGGTTTTGAAAACCAC
CTATATCAGGTGAGCTTAAGTGACTTTAATGGAAACATAGATGAATTTGAAGAACACCTTAAAAAAGTCATTGAGGGTAT
GGAGAAAAGAGAGCCAATAAATAAAAAATTAAGATTAGGCTATATAGGAGTTCCTCCAATGACTGGAGATATATATGAGT
TTAGTGAAAAATTAAATGCTCATTTTGTATATAACGAAGTTCAAAGAGAATTTGCTTTTCCTAGGGGGATAGAAGCTGCA
AATATATTTGAACAGTATTATAATTACACCTATCCTTATGATAATGAGTTTAGAATTAAGGAATTGAAAAAGCAAATAGA
AAAGAGAAAAATAGATGCTATAATTCACTACACTCAGGCTTTTTGCCATAGAGCTGTTGAAGATATAGTATTAAAAGAAG
AATTAAATATTCCTATGTTAAATATTGAAGGTGATAAGTTAAATACATTAGATGCAAGAACTAAACTAAGATTAGAAGCC
TTTCTGGATATGTTGCTGGACTTAAAGCAGAAGTAA

Upstream 100 bases:

>100_bases
AATAAATAATAATTTATCATAACCATTATAACTGTTTAATGTTTTCAAGTCTAAGTGAGTGTAATAGATTGAAAAATCTA
TAGCACAAGGAGGAATGAAA

Downstream 100 bases:

>100_bases
TAGGTGATCTAGTAAGAATTTTTATCTTAATATATTGTTGGATTTAAAGCAAAAGTAATAGACGGTATATAAAAGAAGTT
CATGTTTTCTTTATATTTAG

Product: putative 2-hydroxyglutaryl-CoA dehydratase subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MKKIGLTTTVPVEVIVAAGYTPVDLNNMFITSENYLKYIDIAERDGFPKSLCAWIKGIYGACLENNIKEIVGVMEGDCSN
TKALIEVFKLRGIKIYPFSFPHSHSLKDVEIEIRKFMDIFNVNEDKVEQVRKRLNRVRKLAKKIDEMTYIDNKVNGFENH
LYQVSLSDFNGNIDEFEEHLKKVIEGMEKREPINKKLRLGYIGVPPMTGDIYEFSEKLNAHFVYNEVQREFAFPRGIEAA
NIFEQYYNYTYPYDNEFRIKELKKQIEKRKIDAIIHYTQAFCHRAVEDIVLKEELNIPMLNIEGDKLNTLDARTKLRLEA
FLDMLLDLKQK

Sequences:

>Translated_331_residues
MKKIGLTTTVPVEVIVAAGYTPVDLNNMFITSENYLKYIDIAERDGFPKSLCAWIKGIYGACLENNIKEIVGVMEGDCSN
TKALIEVFKLRGIKIYPFSFPHSHSLKDVEIEIRKFMDIFNVNEDKVEQVRKRLNRVRKLAKKIDEMTYIDNKVNGFENH
LYQVSLSDFNGNIDEFEEHLKKVIEGMEKREPINKKLRLGYIGVPPMTGDIYEFSEKLNAHFVYNEVQREFAFPRGIEAA
NIFEQYYNYTYPYDNEFRIKELKKQIEKRKIDAIIHYTQAFCHRAVEDIVLKEELNIPMLNIEGDKLNTLDARTKLRLEA
FLDMLLDLKQK
>Mature_331_residues
MKKIGLTTTVPVEVIVAAGYTPVDLNNMFITSENYLKYIDIAERDGFPKSLCAWIKGIYGACLENNIKEIVGVMEGDCSN
TKALIEVFKLRGIKIYPFSFPHSHSLKDVEIEIRKFMDIFNVNEDKVEQVRKRLNRVRKLAKKIDEMTYIDNKVNGFENH
LYQVSLSDFNGNIDEFEEHLKKVIEGMEKREPINKKLRLGYIGVPPMTGDIYEFSEKLNAHFVYNEVQREFAFPRGIEAA
NIFEQYYNYTYPYDNEFRIKELKKQIEKRKIDAIIHYTQAFCHRAVEDIVLKEELNIPMLNIEGDKLNTLDARTKLRLEA
FLDMLLDLKQK

Specific function: Unknown

COG id: COG1775

COG function: function code E; Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To E.coli yjiM [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010327 [H]

Pfam domain/function: PF06050 HGD-D [H]

EC number: NA

Molecular weight: Translated: 38702; Mature: 38702

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIGLTTTVPVEVIVAAGYTPVDLNNMFITSENYLKYIDIAERDGFPKSLCAWIKGIYG
CCCCCCCCCCHHHEEEECCCCCEECCCEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHH
ACLENNIKEIVGVMEGDCSNTKALIEVFKLRGIKIYPFSFPHSHSLKDVEIEIRKFMDIF
HHHHCCHHHHHHHHCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHH
NVNEDKVEQVRKRLNRVRKLAKKIDEMTYIDNKVNGFENHLYQVSLSDFNGNIDEFEEHL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCEEEEEECCCCCCHHHHHHHH
KKVIEGMEKREPINKKLRLGYIGVPPMTGDIYEFSEKLNAHFVYNEVQREFAFPRGIEAA
HHHHHHHHHCCCCCHHEEEEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHH
NIFEQYYNYTYPYDNEFRIKELKKQIEKRKIDAIIHYTQAFCHRAVEDIVLKEELNIPML
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
NIEGDKLNTLDARTKLRLEAFLDMLLDLKQK
EECCCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKIGLTTTVPVEVIVAAGYTPVDLNNMFITSENYLKYIDIAERDGFPKSLCAWIKGIYG
CCCCCCCCCCHHHEEEECCCCCEECCCEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHH
ACLENNIKEIVGVMEGDCSNTKALIEVFKLRGIKIYPFSFPHSHSLKDVEIEIRKFMDIF
HHHHCCHHHHHHHHCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHH
NVNEDKVEQVRKRLNRVRKLAKKIDEMTYIDNKVNGFENHLYQVSLSDFNGNIDEFEEHL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCEEEEEECCCCCCHHHHHHHH
KKVIEGMEKREPINKKLRLGYIGVPPMTGDIYEFSEKLNAHFVYNEVQREFAFPRGIEAA
HHHHHHHHHCCCCCHHEEEEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHH
NIFEQYYNYTYPYDNEFRIKELKKQIEKRKIDAIIHYTQAFCHRAVEDIVLKEELNIPML
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
NIEGDKLNTLDARTKLRLEAFLDMLLDLKQK
EECCCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]