| Definition | Clostridium botulinum A str. ATCC 19397, complete genome. |
|---|---|
| Accession | NC_009697 |
| Length | 3,863,450 |
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The map label for this gene is yloU [H]
Identifier: 153933450
GI number: 153933450
Start: 2507142
End: 2507492
Strand: Reverse
Name: yloU [H]
Synonym: CLB_2370
Alternate gene names: 153933450
Gene position: 2507492-2507142 (Counterclockwise)
Preceding gene: 153933925
Following gene: 153931483
Centisome position: 64.9
GC content: 30.48
Gene sequence:
>351_bases ATGATAGGAAAGTTAACTAATGAATATGGACATATAGATTATGCTGAAGATGTAGTTGCTAATATTGTAGGTGTATCTAC AATGGAATGTTATGGCGTGGTTGGAATGGCATCTAAAAATGCAACAGATGGTCTTTGGGAATTGATTAAAGGAGAAAGTT TCAATAAAGGGGTTAAAATTCGTGCCGTTGAAGGTAAATTAAACATAGAATTATATATAATAGTAGAGTACGGAACTAAA ATATCTGTAATAGCTAATAATATTATACAAAAGATAAGATATAACATAGAAAACTATACAGGACTTAAGGTTTCCAGTAT TACTGTAAATGTTCAGGGTGTTAGAGTTTAG
Upstream 100 bases:
>100_bases AATATAGCAAAAAAAGCATTAATAATAATATATTTCCTTGAATAAATCTTTCATTTAATATAAAATAAACTATATGATAT GATATAAGGAGGTTTCTTTC
Downstream 100 bases:
>100_bases GAGGTAAGTCATAAATGGAACATATGAAAATAAAAGGTGCAGATTTTTACAACATGGTAATAAATGGGAGTAACAAATTA GAAGAAAAAAAAGAATTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MIGKLTNEYGHIDYAEDVVANIVGVSTMECYGVVGMASKNATDGLWELIKGESFNKGVKIRAVEGKLNIELYIIVEYGTK ISVIANNIIQKIRYNIENYTGLKVSSITVNVQGVRV
Sequences:
>Translated_116_residues MIGKLTNEYGHIDYAEDVVANIVGVSTMECYGVVGMASKNATDGLWELIKGESFNKGVKIRAVEGKLNIELYIIVEYGTK ISVIANNIIQKIRYNIENYTGLKVSSITVNVQGVRV >Mature_116_residues MIGKLTNEYGHIDYAEDVVANIVGVSTMECYGVVGMASKNATDGLWELIKGESFNKGVKIRAVEGKLNIELYIIVEYGTK ISVIANNIIQKIRYNIENYTGLKVSSITVNVQGVRV
Specific function: Unknown
COG id: COG1302
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the asp23 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005531 [H]
Pfam domain/function: PF03780 DUF322 [H]
EC number: NA
Molecular weight: Translated: 12758; Mature: 12758
Theoretical pI: Translated: 7.33; Mature: 7.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGKLTNEYGHIDYAEDVVANIVGVSTMECYGVVGMASKNATDGLWELIKGESFNKGVKI CCCCCCCCCCCCCCHHHHHHHHHCCCCHHHEEEEEECCCCCCHHHHHHHCCCCCCCCEEE RAVEGKLNIELYIIVEYGTKISVIANNIIQKIRYNIENYTGLKVSSITVNVQGVRV EEECCEEEEEEEEEEECCCEEEEHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEC >Mature Secondary Structure MIGKLTNEYGHIDYAEDVVANIVGVSTMECYGVVGMASKNATDGLWELIKGESFNKGVKI CCCCCCCCCCCCCCHHHHHHHHHCCCCHHHEEEEEECCCCCCHHHHHHHCCCCCCCCEEE RAVEGKLNIELYIIVEYGTKISVIANNIIQKIRYNIENYTGLKVSSITVNVQGVRV EEECCEEEEEEEEEEECCCEEEEHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9534248; 9384377 [H]