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The map label for this gene is yfiH [C]

Identifier: 153932022

GI number: 153932022

Start: 2540308

End: 2541027

Strand: Reverse

Name: yfiH [C]

Synonym: CLB_2405

Alternate gene names: 153932022

Gene position: 2541027-2540308 (Counterclockwise)

Preceding gene: 153931458

Following gene: 153932630

Centisome position: 65.77

GC content: 25.14

Gene sequence:

>720_bases
ATGAATTTTGAAAAAATTAATGTAGGTGCATATACATTTCTAAAATCGGAATTTAAAAATGCTAATTTTATATTTTCTAC
TGGAGAAAATCATCTGAATTTTAATAAAAATATAGATGAAGGAAAAGAAAATTTGAATAATATAAAAAAATGGTTTTTAT
TAGAGGAAGTATGTTATTTAGATCAAGTACACAGTAGTATAGTTAGAAATTTTAAGGATAAAGATAAAGAGGGAGATGCA
ATAATAACTAATAAATTTAATAGAGCTGTAGGTGTTTTTACAGCAGATTGTGTTCCTATATTGTTATATGATAAAGAAAA
TGAGGCAATAGGTGCGGTTCACAGTGGCTGGAGAGGTACCTATGAGAATATAGTCATAAATACCTTAAAGAAAATGAAAG
AAAATTATAATACAAAAACAGAAAATATTATAGCTTCAATAGGTCCACATATAAAAGATTGTTGCTATGAAGTTAGTTAT
GAGTTAATAAATAAGTTTAAAGAAGACAAAATATATAATGATTATAATATAAACTATAAAAGAAATTTAAATATGGAAGC
ATGTATATTGGCACAACTAAGCAATGTAGGGGTTAAAAATAAAAATATAATTAGAGCAAACTTATGTACTATGTGTAGTT
CTGATCCTAAATTTTATTCCTATAGAAAAGAGGGGAATATAGGAAGACAATTTTCCTTTGTATATTTAAACAAACAGTAG

Upstream 100 bases:

>100_bases
AGTTAGAAACTCTATGTTAAAATAAAGTTAAAAAATATATATATTTGAAAAATAATATAAAATTAATGATAATATATTTA
TAGGAAGGATGATGTGTCTT

Downstream 100 bases:

>100_bases
GAGGGGTACCATGGCTATGGAAAAAATACTTATAGTAGACGATGAAGAACATATATGTGAATTAATAAAATTTAATTTGG
AAAATAATAGTTATAACTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MNFEKINVGAYTFLKSEFKNANFIFSTGENHLNFNKNIDEGKENLNNIKKWFLLEEVCYLDQVHSSIVRNFKDKDKEGDA
IITNKFNRAVGVFTADCVPILLYDKENEAIGAVHSGWRGTYENIVINTLKKMKENYNTKTENIIASIGPHIKDCCYEVSY
ELINKFKEDKIYNDYNINYKRNLNMEACILAQLSNVGVKNKNIIRANLCTMCSSDPKFYSYRKEGNIGRQFSFVYLNKQ

Sequences:

>Translated_239_residues
MNFEKINVGAYTFLKSEFKNANFIFSTGENHLNFNKNIDEGKENLNNIKKWFLLEEVCYLDQVHSSIVRNFKDKDKEGDA
IITNKFNRAVGVFTADCVPILLYDKENEAIGAVHSGWRGTYENIVINTLKKMKENYNTKTENIIASIGPHIKDCCYEVSY
ELINKFKEDKIYNDYNINYKRNLNMEACILAQLSNVGVKNKNIIRANLCTMCSSDPKFYSYRKEGNIGRQFSFVYLNKQ
>Mature_239_residues
MNFEKINVGAYTFLKSEFKNANFIFSTGENHLNFNKNIDEGKENLNNIKKWFLLEEVCYLDQVHSSIVRNFKDKDKEGDA
IITNKFNRAVGVFTADCVPILLYDKENEAIGAVHSGWRGTYENIVINTLKKMKENYNTKTENIIASIGPHIKDCCYEVSY
ELINKFKEDKIYNDYNINYKRNLNMEACILAQLSNVGVKNKNIIRANLCTMCSSDPKFYSYRKEGNIGRQFSFVYLNKQ

Specific function: Unknown

COG id: COG1496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0124 family [H]

Homologues:

Organism=Homo sapiens, GI190194374, Length=171, Percent_Identity=29.8245614035088, Blast_Score=87, Evalue=9e-18,
Organism=Homo sapiens, GI190194372, Length=171, Percent_Identity=29.8245614035088, Blast_Score=87, Evalue=9e-18,
Organism=Escherichia coli, GI1788945, Length=192, Percent_Identity=29.1666666666667, Blast_Score=84, Evalue=9e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003730
- InterPro:   IPR011324 [H]

Pfam domain/function: PF02578 Cu-oxidase_4 [H]

EC number: NA

Molecular weight: Translated: 27736; Mature: 27736

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFEKINVGAYTFLKSEFKNANFIFSTGENHLNFNKNIDEGKENLNNIKKWFLLEEVCYL
CCCEEEECHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
DQVHSSIVRNFKDKDKEGDAIITNKFNRAVGVFTADCVPILLYDKENEAIGAVHSGWRGT
HHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEECCCEEEEEECCCCCCCHHHHCCCCCH
YENIVINTLKKMKENYNTKTENIIASIGPHIKDCCYEVSYELINKFKEDKIYNDYNINYK
HHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
RNLNMEACILAQLSNVGVKNKNIIRANLCTMCSSDPKFYSYRKEGNIGRQFSFVYLNKQ
ECCCHHHHHHHHHHHCCCCCCCEEEHHHHHHCCCCCCCEEEECCCCCCCEEEEEEEECC
>Mature Secondary Structure
MNFEKINVGAYTFLKSEFKNANFIFSTGENHLNFNKNIDEGKENLNNIKKWFLLEEVCYL
CCCEEEECHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
DQVHSSIVRNFKDKDKEGDAIITNKFNRAVGVFTADCVPILLYDKENEAIGAVHSGWRGT
HHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEECCCEEEEEECCCCCCCHHHHCCCCCH
YENIVINTLKKMKENYNTKTENIIASIGPHIKDCCYEVSYELINKFKEDKIYNDYNINYK
HHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
RNLNMEACILAQLSNVGVKNKNIIRANLCTMCSSDPKFYSYRKEGNIGRQFSFVYLNKQ
ECCCHHHHHHHHHHHCCCCCCCEEEHHHHHHCCCCCCCEEEECCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7961408; 11466286 [H]